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CcUC02G041760 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGTATAACTCTTCTTTCTTCATTTTCTTTGATCGAAATATATACCTTAACTTTTTGAGTTACATTTAAAGTCGATCAATCCTAATAAATACTAAAAAAAAAATAATTAAATTTGGACAACCTAAAATGAAAATGAAAATAGATGAATTGAAAATTAATAAACAAATGCGTTTGCCGGGAGTCGAACCCGGATCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAAACGCAATCGTTAACTTTGAAAATCAAAAAACCTTTAGTTCGTTCATAATCACAAATAAAAAATAATATTGAGCATTTTATTTCGTTAATAACAATCTGCCCTTTCTCAAGGCATTTCTTTAGACAAAGACTCCGTTTTTTCCTCTTTTCGGATGGTAAATATTTCTCAGAACATGGAGTGTGAATCAAACCCATGTTTGAATTGAAATTGAGATACTGATGCAAGTTCTTCCCCTCTGAATCAGATAGATTCATATCTGAAAGAGGTTGACAATAAGTTCTTTCAAAATTGACTATTTGTCCCTCTGTTAGAGGTGTTCCAGAAATGTCTGCGATCGAGTAAATAGCTCGACGAACGAATGGATCGGATCGAATTGGAAAATGGAAAGATTTGTACAAGTTATACCTTTCGTCACCACTTTGTGGAAAATCGTTAGGTATGAATATGTTAGATACCTGTGACTCGATTGGTGAAATAGTATCTCTCTCCAAAAAAGCATGTTTTTTTTTACCGCCGCACAAAGAAAATATTTTGTTGCGAATGAACAAGATATTGAGGAATTGTCCATACGTAAAATCATAATTATTGATACGGGCCTTTTCCACATAATCCACATAAAAAGGGAATCTTTTGTTACAATAGAAGCAGAAGTGATGTGGATTATTCAAGAATCGAAGTCGAGTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTTAGCCAATTGTCTTGATCGTGGGATATCATTGAGAAATAGGAATCCGTGTTATCAAAGGATTTCCTGCGATTATTTCTAGTATGGAATGAGTCAATCATCCACTTTGGTATCTTATTGAACAAAAATGGTGATATTGTTCCTCCATTGATCAAGAATTTCGATTTTTGGGAAGTATCATGATCATCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACGATTTGAAGACCTATTGATTCTAACAACTGATTGCAGAGTTGATCATTCGGACCTTTCAATTCATAGATGTGGATCTCGGACCTATGAATGGGGATATTCCCGAAACTCACAAAGAAAAAAGGAAGTGAGTTAGACAAAAAGAGAAGAAACTTGGACAAAAAAACAAGTAACTTGGACAAAAAGAAACGAAGTGACTTAGACAAATCTTTTTTATCGATAACCTCAGACCAATCAATCGAATATTGATTAATACGTAATCGATCGAACACTACTTGAAAATGAAAATGGCTCTTCTGCTCAGAAATGAAATGTTCCTGGAAATTCTTGCTCCCATTGGACCATTTGTATCTATATGCATTAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGATCGAACCATTTCTTCTGACCCTTTTTCAAATTTGATAAATGTTGGTTGATCGTATATTTCATTATAGTTCTATGATTCAGAGTATCATTTCCTATTTGATCCCTTTGAATTCCATATTCCAAGTTACGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTGTTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGATTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTTGTTTTGGATCTTCCAAATCATTCCCGGGGATGTCCGGACCCATTTTTTTCTGATTCTTCGATAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAATATATCTTTTTCGATTCATCCCTGGAGTTGAATACCTCATTCAAGAATTGTTTTTGATCCAATCTGTAGGAATCAATAGAAAAGACAAATCCTTTATGATACACCAGATCCAGCTCAGTTATTGATAGAGTGAATAGATCTGCCATTTCTTGAAATCTCTCTTCTGATTCAAAATCGTGGTGTAACGTGTTCCGGTCATGGAATAGATGAAATAAATAAATAAATGGATTTTTGTTCAAGAATGAAATCTTATTAGAACTGTCCATTTCATCCTTCGGAACCATATCACATCCCGGATCTGATGAAATAGGATGAATTGAGACGATATTTTGTAAATACGTAATTATCTTGAATATATTAACTATTTCTTTATTTTCCGATCGCCTGGAAGGGACAAAAGAAACATCTTGTTCTTTCTTCAACAATTTCTGATCTCTAATGGACCTCTTAATAGGATTCGAACCCATATGAAGTTCTGACCATCTGTCAGAGAAAAAAGAATGAATGGATCTTGTAGGATTCCCAAGAAATTCTTCGATTTCTTCAGGAAGCGGATGATTATTCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAAGCATTTCGTTTTTACGTAAGTACGTAACTCAACGAGAAATTTCCTTACTTGTCCAATTTCTAATGAATCAAGATAACCATTAGTTCCGGTATAAATAGTCATTATCTGTTCTTCTACCGTGAGAGGGGCTGATTGGGATTGTTTGAGCAACTCACGTAATCGTTGACCTCTTGCCAATTGATTCTGAGTAGCTTTATCGAGATCAGAAGCGAATTGCGCAAAGGCTTCTAATTCGGCAAATTGAGCCAATTCCAATTTTAATTTGCCGGCTACTTGTTTCATGGCTTTAATTTGAGCTGCAGATCCTACTCTGGAGACGGAAATACCCACATTAATAGCAAGTCTGATTCCAGCATTGAATAGATCGGCAAATAAGAATATTTGTCCATCGATAATGGAAATAACATTAGTAGGAATATAAGCTGAAACATCTCCTGATTGGGTCTCAACTATTGGTAAAGTCGTCATACTTCATTCACCTAAAGCAGAACTTGATTTAGCGGCTCTTTCCAAAAGGCGTGAATGCAAATAAAAAACATCTCCCGAATAAGCTTCGCGGCCTGGCGGTCTTCGGCCGAGTATTTTATTGTTAAGTATAGTTATGCTTTTTTCAGTTTATCTGTCTATCGATCAAATAAATAGTAGTTATATCTATCAATATGTATGGTCTTGGACTATCAATAATGATTTTTCTTTAGAGTTGGGCTACTTGATCGATCCACTTACTTGTATTATGTCAATATTAATCACGACTGTTGGAATTATGGTTCTTATTTATAGTGACAATTATATGTCTCATGATCAAGGATATTTGAGATTTTTTGCGTATATGAGTTTGTTCAATACGTCAATGTTGGGATTAGTTACTAGTTCAAATTTGATCCAAATTTATATTTTTTGGGAATTGGTTGGAATGTGTTCTTATCTATTAATAGGTTTTTGGTTCACTCGACCTACTGCGGCGAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTAGGAGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAACGGGGAGTTTTGAATTTCGGGATTTATTTAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGGGGTAGTTAA ATGGCTATAGTTGATCATTCGGACCTTTCAATTCATAGATGTGGATCTCGGACCTATGAATGGGGATATTCCCGAAACTCACAAAGAAAAAAGGAAGTGATTTATCTGTCTATCGATCAAATAAATAGTAGTTATATCTATCAATATGTATGGTCTTGGACTATCAATAATGATTTTTCTTTAGAGTTGGGCTACTTGATCGATCCACTTACTTGTATTATGTCAATATTAATCACGACTGTTGGAATTATGGTTCTTATTTATAGTGACAATTATATGTCTCATGATCAAGGATATTTGAGATTTTTTGCGTATATGAGTTTGTTCAATACGTCAATGTTGGGATTAGTTACTAGTTCAAATTTGATCCAAATTTATATTTTTTGGGAATTGGTTGGAATGTGTTCTTATCTATTAATAGGTTTTTGGTTCACTCGACCTACTGCGGCGAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTAGGAGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAACGGGGAGTTTTGAATTTCGGGATTTATTTAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGGGGTAGTTAA ATGGCTATAGTTGATCATTCGGACCTTTCAATTCATAGATGTGGATCTCGGACCTATGAATGGGGATATTCCCGAAACTCACAAAGAAAAAAGGAAGTGATTTATCTGTCTATCGATCAAATAAATAGTAGTTATATCTATCAATATGTATGGTCTTGGACTATCAATAATGATTTTTCTTTAGAGTTGGGCTACTTGATCGATCCACTTACTTGTATTATGTCAATATTAATCACGACTGTTGGAATTATGGTTCTTATTTATAGTGACAATTATATGTCTCATGATCAAGGATATTTGAGATTTTTTGCGTATATGAGTTTGTTCAATACGTCAATGTTGGGATTAGTTACTAGTTCAAATTTGATCCAAATTTATATTTTTTGGGAATTGGTTGGAATGTGTTCTTATCTATTAATAGGTTTTTGGTTCACTCGACCTACTGCGGCGAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTAGGAGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAACGGGGAGTTTTGAATTTCGGGATTTATTTAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGGGGTAGTTAA MAIVDHSDLSIHRCGSRTYEWGYSRNSQRKKEVIYLSIDQINSSYIYQYVWSWTINNDFSLELGYLIDPLTCIMSILITTVGIMVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPTAANACQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGGS Homology
BLAST of CcUC02G041760 vs. NCBI nr
Match: QZL38642.1 (NADH dehydrogenase subunit F [Citrullus naudinianus]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. NCBI nr
Match: QZL38730.1 (NADH dehydrogenase subunit F [Citrullus ecirrhosus]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. NCBI nr
Match: YP_009420842.1 (NADH dehydrogenase subunit 5 [Citrullus colocynthis] >YP_009431690.1 NADH dehydrogenase subunit 5 [Citrullus rehmii] >ASP44512.1 NADH dehydrogenase subunit 5 [Citrullus colocynthis] >ASY96293.1 NADH dehydrogenase subunit 5 [Citrullus rehmii]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. NCBI nr
Match: YP_009326037.1 (NADH dehydrogenase subunit 5 [Citrullus lanatus] >YP_009348079.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus] >YP_009431604.1 NADH dehydrogenase subunit 5 [Citrullus amarus] >APW82510.1 NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris] >APD52529.1 NADH dehydrogenase subunit 5 [Citrullus lanatus] >APW82595.1 NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris] >APW82765.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus] >APW82850.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus]) HSP 1 Score: 405.2 bits (1040), Expect = 3.8e-109 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. NCBI nr
Match: APW82680.1 (NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 405.2 bits (1040), Expect = 3.8e-109 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy Swiss-Prot
Match: Q2QD43 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhF PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.6e-110 Identity = 195/201 (97.01%), Postives = 200/201 (99.50%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy Swiss-Prot
Match: Q2VED3 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum tuberosum OX=4113 GN=ndhF PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.3e-103 Identity = 185/201 (92.04%), Postives = 191/201 (95.02%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy Swiss-Prot
Match: Q2MIE0 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum bulbocastanum OX=147425 GN=ndhF PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 9.5e-103 Identity = 184/201 (91.54%), Postives = 191/201 (95.02%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy Swiss-Prot
Match: Q32516 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum lycopersicum OX=4081 GN=ndhF PE=3 SV=2) HSP 1 Score: 374.4 bits (960), Expect = 9.5e-103 Identity = 184/201 (91.54%), Postives = 191/201 (95.02%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy Swiss-Prot
Match: Q68RV9 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Panax ginseng OX=4054 GN=ndhF PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.6e-102 Identity = 186/201 (92.54%), Postives = 190/201 (94.53%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy TrEMBL
Match: A0A249RXF3 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus rehmii OX=260675 GN=ndhF PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.4e-110 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy TrEMBL
Match: A0A343F2D2 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus colocynthis OX=252529 GN=ndhF PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.4e-110 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy TrEMBL
Match: A0A1P8LEA9 (NAD(P)H dehydrogenase subunit 5 OS=Citrullus mucosospermus OX=519315 GN=ndhF PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy TrEMBL
Match: A0A1P8LET2 (NAD(P)H dehydrogenase subunit 5 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhF PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. ExPASy TrEMBL
Match: A0A7T3USK6 (NADH-plastoquinone oxidoreductase subunit 5 OS=Benincasa hispida OX=102211 GN=ndhF PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CcUC02G041760 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein ) HSP 1 Score: 351.3 bits (900), Expect = 6.1e-97 Identity = 173/201 (86.07%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of CcUC02G041760 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C ) HSP 1 Score: 134.8 bits (338), Expect = 9.0e-32 Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = 0
BLAST of CcUC02G041760 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A ) HSP 1 Score: 134.8 bits (338), Expect = 9.0e-32 Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = 0
BLAST of CcUC02G041760 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B ) HSP 1 Score: 134.8 bits (338), Expect = 9.0e-32 Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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