CcUC02G041620 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G041620
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMitochondrial distribution and morphology protein 34
LocationCicolChr02: 36699766 .. 36702973 (-)
RNA-Seq ExpressionCcUC02G041620
SyntenyCcUC02G041620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTCGATTCAAAAGTTAAAGTTGCACTATAGTTATTAGAAACATAGAGATATATATATATATATATTATTTGTTGCAGCCAAGGACATAGAGAAGACAAGTTAGAGAGGAAATTGAAGTGGGAAAGAATGGCGAGATACAACAACTACTACTACTACAACAGGTACCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGGTATGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTCCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTACACATTCTCTCCTTCGGCCTCCCCTTTCTCGTCCCCTTGCCCCAGCAGGACTACCTCCACCGTGCCGGTGGCTCACCCTGGGGCGTCGCCCTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAGTCTCACTACCACCAACGTTGGTTCCCTTTCGGGTATAGATAATCGTTATTTTTCCAACTGCTTGTATTAACTACTTGAATTATGCTTAAGTTTTGGTTTTGTGGAGTATTGCTATTTTGTGTATTATTTATGTCACTGGAATTGTTGTATTACAATAATGACTTTGTCGTCTACATCTATTGCAAGTTTGCTTTTGTGAATTATGATAGAGATTTATTATGGTTTTGTTTCATAATCATTTCATTTTTAAAAATTAAGTCTGGTTCCTCTTAATTTCTTACAATGGTTTTCATTTTTCTTAACTAAAAGAATTGAATTATTCTTAGCCATAATTCCTAAAACAAAAATAATTTTTAGAAACTACTTTTCTTAGTTCTCAAAATTTAATTTATAAGTCTTTGAAAACATTGGAACAAAGTAGATAACAAAATAAGTAATGTGGTGCATGTTTTAGGAGTGATTTTGAAGTTGTTAAAAATCAGTTTTATTATAATCAAAATCATTCCGAAACACTCTTTTAATCAATAGATAAATATTTGATTTTACACCTTTAAATGCAATTTTTATATCATCAAAATTGGTTTTGAGTGATTAAAATTATGTTTCAAATTAATTTTCAAAATGACAAAAGTGATTTTATCCATTTTAAAATCACTCTCCAAATTAGCCTTAAACATGAGAGGAGTGTTTAGAAGTTTCATTTTCGTAAAATTAAAAAACTAAAAATCAAATGGTTACTAAGCAGAGCCTTAAGTTTTGGTTCTTAATTTTTGAAAACTAAGCTTACAAATATTAATAACATTCGTAAGTTTGAATGGTTTGAGAGTAAGTCAATTTGTAAAATAAAAAAAAAAAATATATATATATATATATATATTAATTTTGTTTTTAGAATTTAATTAAGAAAACAATAGTTGATTAAACAAGGATTTAATCATAATTAGAAAATGGAAAGGAAAGAAACAGACATCGTAAAAACAAATTAAACATACAAATCCATAGATAAAAAGTGAAGAAGAAAATGATGGCCATTGAGCCTAAATGCGAAATGGTTATGAAGAGTAAAATGTAATATTAAAATTAACAAATAATAATCATTGAGGGAAACGCAAAATTGGAATATTTATCGTTGTGTATAAAGTTAATTTAAAGTAGGTTGGATTCTTTAGGTTTGAGTGATGGTTTGTGTATGGATGCTTGGTGTCCCAATCACATTTGTGCTCACACAACCAAACAAATATTTCAGAAAAAAGAATCACATTTTCAATTTCCTCTCTCCCTCTCTGTCTCTACACACCGTCACCCTCTCAGTTTATTTCTTTATATAATATTTTCTCAGAAGGAAAAATAATAACTAACATCAACCTTATTTATTGCTGATCTGACCCTACAAAATTATAGTTAAATTATAAATTTGTCCTGGTTGCCACGTGGTAATGAGTTTTCCTTTTCCAAAAATAAAAACAAAATAAAAACTATAAATTATAAATTTACTCCTACAAAGTTAGAATTTAGTTTATGTGATTTGTAATTAGAATTTAGTCTCTATGGTCCCGCAAAACATTTGCAAATGCATATTTTATCTAATTATAGAAACTGTTTGTGAGAACTCATCAAGTTAGATGGACAATAATTCTAATTTTTAAAATTATAGGGACTAATCTCTAACTTTCTCCAAACCATGGGGACTACTTTTTTAAATTTAACTATATCAAATTTATGCCCCTAAATTTTGGAGTTGTATCGATTAAAACTCCAAATTGGTAATTTGTAATAATTTAAATCTTGAATTTGATGAGTCTAAGACTCCTAATATTGATATGGTCTATCACTTATATACCCTTAATATTGATATAGTAAAATGGATAGATTTCAAAATCAAAATCAAAATTTTGTTATATCTGTAAATATTGTGCTATATCTACAAATACTTTGGATTTGATTGCTATATTTGCAACTGTTCCTTCTTTTTACGACAAGAATTTAACTTGATACAACCATCCATTGAAATTTGGCTATAAATTGATATTTAAAAAAAAAAAAAAGGAAAGAAAAAAAACGCACATATAATAACACTAGATATAGTTTAAAGATTTGACGATAGAGGATTATTTAGAAATGCACTCATTTTTATGCGTCCGAGTAGTCTGTACATGCGAAGAAAAATGAATTAGAAATATTTTGAAAAGAATTAAGGTGAAAATAAATTATGATGAAACAGTTAAATAATTTTCAGCCTAATAGGCTCCTTCCTTCTGTTGTAGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGGTTCTCTCTCGCCCAAATTAACTCTTACCACTAATTCCTTCCTTCTACTTTCATTCTTGAATTTTGTTGTACCAATGTGCACCTACTGAAGATTGTTCCCATTTCTTTCTTTTGCTATAGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAACTTTAGATTTCTTATTTTCATGTTATGTCTGTTCTTGTTGTTCCATTCCATGAATGATCGCGT

mRNA sequence

TTGGTCGATTCAAAAGTTAAAGTTGCACTATAGTTATTAGAAACATAGAGATATATATATATATATATTATTTGTTGCAGCCAAGGACATAGAGAAGACAAGTTAGAGAGGAAATTGAAGTGGGAAAGAATGGCGAGATACAACAACTACTACTACTACAACAGGTACCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGGTATGATCCTTCTGCTGGTGATGGCCTTTTCATGGTACATTTTCTATGACTCCTTTCTTGAGGATTTCATCTTCCAACTCAAGCTCTTCCTCCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTACACATTCTCTCCTTCGGCCTCCCCTTTCTCGTCCCCTTGCCCCAGCAGGACTACCTCCACCGTGCCGGTGGCTCACCCTGGGGCGTCGCCCTCCTCCTCGTCTTCCTTCTCTATGTCATCTCTCACCAGTCTCACTACCACCAACGTTGGTTCCCTTTCGGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAACTTTAGATTTCTTATTTTCATGTTATGTCTGTTCTTGTTGTTCCATTCCATGAATGATCGCGT

Coding sequence (CDS)

ATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCCTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACTGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

Protein sequence

MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFSVPKSKNPSQMG
Homology
[Close]
BLAST of CcUC02G041620 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]
BLAST of CcUC02G041620 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1  MKASELSTPTN---AVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ASELSTPTN    VECKDRP+KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPRKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 HFSVPKSKNPSQMG 72
           FSV +SKN S+MG
Sbjct: 61 QFSVSESKNSSKMG 74

[Close]
BLAST of CcUC02G041620 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-24
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 1  MKASELSTPTN---AVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ASELSTPTN    VECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 HFSVPKSKNPSQMG 72
           FSV +SKN S+MG
Sbjct: 61 QFSVSESKNSSKMG 74

[Close]
BLAST of CcUC02G041620 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima])

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-24
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 1  MKASELST---PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ SELST   PTNA ECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 HFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

[Close]
BLAST of CcUC02G041620 vs. NCBI nr
Match: XP_010257524.1 (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera] >DAD42157.1 TPA_asm: hypothetical protein HUJ06_000387 [Nelumbo nucifera])

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-10
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

[Close]
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 1  MKASELST---PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ SELST   PTNA ECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 HFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

[Close]
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.9e-11
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

[Close]
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: A0A1Q3CXU0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0 

Query: 1  MKASELSTPTNAVECK-----DRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 60
          M+A+E+S  +N+   +     D+PQKPPFRPAKDDTK  L DP+ RSDPI+TEEAVLR P
Sbjct: 1  MRATEISKKSNSNSNQSQLKTDKPQKPPFRPAKDDTKPALHDPLLRSDPIETEEAVLRLP 60

Query: 61 PFHFSVPK 64
          PF    PK
Sbjct: 61 PFPVIKPK 68

[Close]
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1  MKASELST--PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFH 60
          MKASE S     N  + +++P KP FRPAKDDTK +LQDPI RSDPI+TEEAVLR PPF 
Sbjct: 1  MKASESSVKPSNNYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPPFP 60

Query: 61 FSVPKSKNP 68
          F+  ++ NP
Sbjct: 61 FA--RTTNP 67

[Close]
BLAST of CcUC02G041620 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 3.8e-10
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 2  KASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 58
          K++E     NA     + QKPPFRPA DDTK +LQDPI RSDP++TEEAVLR P F
Sbjct: 3  KSTETPARPNATV---KTQKPPFRPAVDDTKPVLQDPILRSDPMETEEAVLRLPSF 55

The following BLAST results are available for this feature:
BLAST of CcUC02G041620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54090.13.4e-2991.55hypothetical protein Csa_017904 [Cucumis sativus][more]
KAG7035826.11.9e-2482.43hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6605875.12.5e-2482.43hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022995760.14.3e-2482.43uncharacterized protein LOC111491196 [Cucurbita maxima][more]
XP_010257524.11.2e-1066.13PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera] >DAD42157.1 T... [more]
BLAST of CcUC02G041620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC02G041620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWV81.7e-2991.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1[more]
A0A6J1K4U92.1e-2482.43uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196... [more]
A0A1U7ZV425.9e-1166.13uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593... [more]
A0A1Q3CXU01.7e-1058.82Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4... [more]
W9QLE61.7e-1060.87Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1[more]
BLAST of CcUC02G041620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20480.13.8e-1060.71unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..48
NoneNo IPR availablePANTHERPTHR37207OS09G0446000 PROTEINcoord: 12..67
NoneNo IPR availablePANTHERPTHR37207:SF1OS09G0446000 PROTEINcoord: 12..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G041620.1CcUC02G041620.1mRNA