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CcUC02G041450 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGAGACTATGGAGTTCTGAACAGAGTGTTTCATAACATAACAGACACCTATATTGTTCATCATTTGTTCTCTACAATGCCGCATTATCATGCGAAGGAAGCGACGGAAGCGGTGAAGAAAGTATTAGGAGAATATTATCGGATGGATAGGACCAATGTTTTGAAGGCTATTTGGAGGGAGGCTAAGGAGTGTGTTTATGTTGAGGCTGATGAGGATGCCGATTCTGATAAGGGAGTTGTCTGGTACCGAAACAAGCTTTGAGCTTCTTACCAATACAAATTGATGGACCAAAGGAAAAAAAATGGAAGATCAAAATGGTGGGGGCTCTAGCACTTTCCTCATCTTTTCTTTTAAGGTCTCTGTATATTTTGTGGGAAGACAGTAGCGTGATAATGGCGATGGAGGATGAAAAAACCTTTAAAGAAGGCCCTTTGGTTTTGGAGGTTTCAAGATTATTGCATCATAATGTTATGTGA ATGGACAGAGACTATGGAGTTCTGAACAGAGTGTTTCATAACATAACAGACACCTATATTGTTCATCATTTGTTCTCTACAATGCCGCATTATCATGCGAAGGAAGCGACGGAAGCGGTGAAGAAAGTATTAGGAGAATATTATCGGATGGATAGGACCAATGTTTTGAAGGCTATTTGGAGGGAGGCTAAGGAGTGTGTTTATGTTGAGGCTGATGAGGATGCCGATTCTGATAAGGGAGTTGTCTGTAGCGTGATAATGGCGATGGAGGATGAAAAAACCTTTAAAGAAGGCCCTTTGGTTTTGGAGGTTTCAAGATTATTGCATCATAATGTTATGTGA ATGGACAGAGACTATGGAGTTCTGAACAGAGTGTTTCATAACATAACAGACACCTATATTGTTCATCATTTGTTCTCTACAATGCCGCATTATCATGCGAAGGAAGCGACGGAAGCGGTGAAGAAAGTATTAGGAGAATATTATCGGATGGATAGGACCAATGTTTTGAAGGCTATTTGGAGGGAGGCTAAGGAGTGTGTTTATGTTGAGGCTGATGAGGATGCCGATTCTGATAAGGGAGTTGTCTGTAGCGTGATAATGGCGATGGAGGATGAAAAAACCTTTAAAGAAGGCCCTTTGGTTTTGGAGGTTTCAAGATTATTGCATCATAATGTTATGTGA MDRDYGVLNRVFHNITDTYIVHHLFSTMPHYHAKEATEAVKKVLGEYYRMDRTNVLKAIWREAKECVYVEADEDADSDKGVVCSVIMAMEDEKTFKEGPLVLEVSRLLHHNVM Homology
BLAST of CcUC02G041450 vs. NCBI nr
Match: Q84UB9.1 (RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii] >AAO37752.1 delta-12 oleate desaturase [Trichosanthes kirilowii]) HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CcUC02G041450 vs. NCBI nr
Match: XP_022957911.1 (delta(12)-oleate desaturase-like [Cucurbita moschata] >XP_023533966.1 delta(12)-oleate desaturase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34 Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CcUC02G041450 vs. NCBI nr
Match: KAG6605886.1 (Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34 Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CcUC02G041450 vs. NCBI nr
Match: KAG6570369.1 (Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.8 bits (390), Expect = 4.3e-34 Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of CcUC02G041450 vs. NCBI nr
Match: XP_022943671.1 (delta(12)-oleate desaturase [Cucurbita moschata]) HSP 1 Score: 154.5 bits (389), Expect = 5.6e-34 Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy Swiss-Prot
Match: Q84UB9 (Delta(12)-oleate desaturase OS=Trichosanthes kirilowii OX=3677 GN=FAD2 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.0e-38 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy Swiss-Prot
Match: Q8GZC3 (Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-29 Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy Swiss-Prot
Match: P48631 (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max OX=3847 GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29 Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy Swiss-Prot
Match: Q84VT2 (Delta(12)-acyl-lipid-desaturase OS=Punica granatum OX=22663 GN=FAD12 PE=2 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 4.8e-28 Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy Swiss-Prot
Match: P48630 (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max OX=3847 GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.2e-28 Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy TrEMBL
Match: A0A6J1H0J3 (delta(12)-oleate desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111459302 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34 Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy TrEMBL
Match: A0A6J1FSC4 (delta(12)-oleate desaturase OS=Cucurbita moschata OX=3662 GN=LOC111448353 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.7e-34 Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy TrEMBL
Match: A0A6J1K4R6 (delta(12)-oleate desaturase OS=Cucurbita maxima OX=3661 GN=LOC111490747 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.1e-34 Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy TrEMBL
Match: A0A7J6FWL1 (Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_004708 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.3e-30 Identity = 64/96 (66.67%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of CcUC02G041450 vs. ExPASy TrEMBL
Match: A0A803PX48 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 5.9e-29 Identity = 60/81 (74.07%), Postives = 75/81 (92.59%), Query Frame = 0
BLAST of CcUC02G041450 vs. TAIR 10
Match: AT3G12120.1 (fatty acid desaturase 2 ) HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26 Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of CcUC02G041450 vs. TAIR 10
Match: AT3G12120.2 (fatty acid desaturase 2 ) HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26 Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of CcUC02G041450 vs. TAIR 10
Match: AT3G11170.1 (fatty acid desaturase 7 ) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of CcUC02G041450 vs. TAIR 10
Match: AT2G29980.1 (fatty acid desaturase 3 ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CcUC02G041450 vs. TAIR 10
Match: AT5G05580.1 (fatty acid desaturase 8 ) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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