CcUC02G041440 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G041440
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Delta-12 fatty acid desaturase
Location	CicolChr02: 36548970 .. 36549746 (+)
RNA-Seq Expression	CcUC02G041440
Synteny	CcUC02G041440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAGTTCCCCACGCAAAGCCTCCTTTCACTCTCAGCCAAATCGAGAAAGCCATTCCTCCCCACTGCTTCCACCGCTCTCTTCTCCGTTCCTTCTCCTACTTACTTTCCGACCTCACCATTATCTCTCTCTTCTTCTACCTCGCCATTACCTATTTCCCTCTTCTCCCCAAACCGCTCCCTTACATTGCATGGCCCTTTTACTGGCTCTTCCAAGGCTGCTTCCTCACCGGCGTCTGGGTCATCGCTCACGAGTGCAGCCACCATGCTTTCTCCGACTACCAATTACTCGACGACATCTTCGGCCTCTTCTTCCACTCTGCTCTCCTCGTCCCCTACTTCTCCTGGAAGTACAGTCACCGGCGCCACCACTCCAACACCGCCTCCCTCGAACGGGATGGTCTTCGTCCCCAAGCCAAAATCCCAAATCCCTTGGTATCTAAACTACTTCAATAACCCACCAGGGACGCTCATTTCTCTCCTAGGAACACTCACTCTGGGCTGGCCTTTGTACTTAGCCTTCAACGCCTCAGGCCGTTCCTACAACCGATTCGCCTGCCACTACGATCCCTACGGCCCAATATTCACCAAACGTGAACGGATTCAAATTTACATCTCGGATGCAGGGATTTTAGGGATGGCGTTCGTGCTCTACCGAATTGGTGCTGCGAAAGGGGCGTTATGGGTAATTCGTAATGCCGTTGGTGATTGTGAATGGGTTTTTGGTTTTGATTACTTATTTGCAGCATACTCATCCGTCCTTGCCGCACTATGA

mRNA sequence

ATGAGCGAGTTCCCCACGCAAAGCCTCCTTTCACTCTCAGCCAAATCGAGAAAGCCATTCCTCCCCACTGCTTCCACCGCTCTCTTCTCCGTTCCTTCTCCTACTTACTTTCCGACCTCACCATTATCTCTCTCTTCTTCTACCTCGCCATTACCTATTTCCCTCTTCTCCCCAAACCGCTCCCTTACATTGCATGGCCCTTTTACTGGCTCTTCCAAGGCTGCTTCCTCACCGGCGTCTGGGTCATCGCTCACGAGTGCAGCCACCATGCTTTCTCCGACTACCAATTACTCGACGACATCTTCGGCCTCTTCTTCCACTCTGCTCTCCTCGTCCCCTACTTCTCCTGGAAGTACAGTCACCGGCGCCACCACTCCAACACCGCCTCCCTCGAACGGGATGGTCTTCGTCCCCAAGCCAAAATCCCAAATCCCTTGGTATCTAAACTACTTCAATAACCCACCAGGGACGCTCATTTCTCTCCTAGGAACACTCACTCTGGGCTGGCCTTTGTACTTAGCCTTCAACGCCTCAGGCCGTTCCTACAACCGATTCGCCTGCCACTACGATCCCTACGGCCCAATATTCACCAAACGTGAACGGATTCAAATTTACATCTCGGATGCAGGGATTTTAGGGATGGCGTTCGTGCTCTACCGAATTGGTGCTGCGAAAGGGGCGTTATGGGTAATTCGTAATGCCGTTGGTGATTGTGAATGGGTTTTTGGTTTTGATTACTTATTTGCAGCATACTCATCCGTCCTTGCCGCACTATGA

Coding sequence (CDS)

ATGAGCGAGTTCCCCACGCAAAGCCTCCTTTCACTCTCAGCCAAATCGAGAAAGCCATTCCTCCCCACTGCTTCCACCGCTCTCTTCTCCGTTCCTTCTCCTACTTACTTTCCGACCTCACCATTATCTCTCTCTTCTTCTACCTCGCCATTACCTATTTCCCTCTTCTCCCCAAACCGCTCCCTTACATTGCATGGCCCTTTTACTGGCTCTTCCAAGGCTGCTTCCTCACCGGCGTCTGGGTCATCGCTCACGAGTGCAGCCACCATGCTTTCTCCGACTACCAATTACTCGACGACATCTTCGGCCTCTTCTTCCACTCTGCTCTCCTCGTCCCCTACTTCTCCTGGAAGTACAGTCACCGGCGCCACCACTCCAACACCGCCTCCCTCGAACGGGATGGTCTTCGTCCCCAAGCCAAAATCCCAAATCCCTTGGTATCTAAACTACTTCAATAACCCACCAGGGACGCTCATTTCTCTCCTAGGAACACTCACTCTGGGCTGGCCTTTGTACTTAGCCTTCAACGCCTCAGGCCGTTCCTACAACCGATTCGCCTGCCACTACGATCCCTACGGCCCAATATTCACCAAACGTGAACGGATTCAAATTTACATCTCGGATGCAGGGATTTTAGGGATGGCGTTCGTGCTCTACCGAATTGGTGCTGCGAAAGGGGCGTTATGGGTAATTCGTAATGCCGTTGGTGATTGTGAATGGGTTTTTGGTTTTGATTACTTATTTGCAGCATACTCATCCGTCCTTGCCGCACTATGA

Protein sequence

MSEFPTQSLLSLSAKSRKPFLPTASTALFSVPSPTYFPTSPLSLSSSTSPLPISLFSPNRSLTLHGPFTGSSKAASSPASGSSLTSAATMLSPTTNYSTTSSASSSTLLSSSPTSPGSTVTGATTPTPPPSNGMVFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIRNAVGDCEWVFGFDYLFAAYSSVLAAL

Homology

[Close]

BLAST of CcUC02G041440 vs. NCBI nr
Match: XP_022943671.1 (delta(12)-oleate desaturase [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-43
Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GP
Sbjct: 147 VFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYLAFNVSGRPYDRFACHYDPHGP 206

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE +QIYISD GILGM FVLYRIG AKGALWV+R
Sbjct: 207 IFTKREWVQIYISDTGILGMCFVLYRIGVAKGALWVMR 244

[Close]

BLAST of CcUC02G041440 vs. NCBI nr
Match: KAG6570369.1 (Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-43
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GP
Sbjct: 147 VFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYLAFNVSGRPYDRFACHYDPHGP 206

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE +Q+YISD GILGM FV+YRIG AKGALWV+R
Sbjct: 207 IFTKREWVQVYISDTGILGMCFVVYRIGVAKGALWVMR 244

[Close]

BLAST of CcUC02G041440 vs. NCBI nr
Match: Q84UB9.1 (RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii] >AAO37752.1 delta-12 oleate desaturase [Trichosanthes kirilowii])

HSP 1 Score: 184.9 bits (468), Expect = 8.9e-43
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPWYL YFNNPPG LISL+GTLTLGWPLYLAFN SGR Y+RFACHYDPY P
Sbjct: 141 VFVPKPKSQIPWYLKYFNNPPGRLISLIGTLTLGWPLYLAFNMSGRPYDRFACHYDPYSP 200

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE IQ+YISDAGILGMAF+LYRIG  KG+ WV+R
Sbjct: 201 IFTKREWIQVYISDAGILGMAFMLYRIGVEKGSFWVMR 238

[Close]

BLAST of CcUC02G041440 vs. NCBI nr
Match: XP_023512996.1 (delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo] >XP_023522472.1 delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-42
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GP
Sbjct: 147 VFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYLAFNVSGRPYDRFACHYDPHGP 206

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE +QIYISD GILGM  VLYRI  AKGALWV+R
Sbjct: 207 IFTKREWVQIYISDTGILGMCLVLYRISVAKGALWVMR 244

[Close]

BLAST of CcUC02G041440 vs. NCBI nr
Match: XP_022957911.1 (delta(12)-oleate desaturase-like [Cucurbita moschata] >XP_023533966.1 delta(12)-oleate desaturase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-41
Identity = 82/98 (83.67%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R+ACHYDPY P
Sbjct: 142 VFVPKPKSQIPWYSKYFNNPPGRLISLIATLTLGWPLYLAFNVSGRPYDRWACHYDPYAP 201

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Sbjct: 202 IFTKREWIQVYISDAGILGMAFVLYRIAMAKGAFWVMR 239

[Close]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot
Match: Q84UB9 (Delta(12)-oleate desaturase OS=Trichosanthes kirilowii OX=3677 GN=FAD2 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-45
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPWYL YFNNPPG LISL+GTLTLGWPLYLAFN SGR Y+RFACHYDPY P
Sbjct: 141 VFVPKPKSQIPWYLKYFNNPPGRLISLIGTLTLGWPLYLAFNMSGRPYDRFACHYDPYSP 200

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE IQ+YISDAGILGMAF+LYRIG  KG+ WV+R
Sbjct: 201 IFTKREWIQVYISDAGILGMAFMLYRIGVEKGSFWVMR 238

[Close]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot
Match: Q8GZC3 (Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-36
Identity = 69/97 (71.13%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPK KS I W+  Y NNPPG L +L  TLTLGWPLYLAFN SGR Y+RFACHYDPYGP
Sbjct: 156 VFVPKKKSSIRWFSKYLNNPPGRLFTLTITLTLGWPLYLAFNVSGRPYDRFACHYDPYGP 215

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI 232
           I+T RER +IYISDAG+L + F LYR+ AAKG  WVI
Sbjct: 216 IYTDRERTEIYISDAGVLAVTFGLYRLAAAKGLAWVI 252

[Close]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot
Match: Q41131 (Oleate hydroxylase FAH12 OS=Ricinus communis OX=3988 GN=FAH12 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-35
Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPK KS+I WY  Y NNPPG +++L  TL LGWPLYLAFN SGR Y+RFACHYDPYGP
Sbjct: 160 VFVPKSKSKISWYSKYLNNPPGRVLTLAATLLLGWPLYLAFNVSGRPYDRFACHYDPYGP 219

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IF++RER+QIYI+D GI    FVLY+   AKG  WV+R
Sbjct: 220 IFSERERLQIYIADLGIFATTFVLYQATMAKGLAWVMR 257

[Close]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot
Match: Q84VT2 (Delta(12)-acyl-lipid-desaturase OS=Punica granatum OX=22663 GN=FAD12 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 5.4e-35
Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKS++PW+  Y NNPPG +++L+ TLTLGWPLYLA N SG  Y+RFACH+DPYGP
Sbjct: 160 VFVPKPKSKMPWFSKYLNNPPGRVMTLIVTLTLGWPLYLALNVSGWPYDRFACHFDPYGP 219

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI 232
           I+T RER+QIYISD GI+   + LY+I AA+G  W++
Sbjct: 220 IYTDRERLQIYISDVGIMAATYTLYKIAAARGLAWLV 256

[Close]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot
Match: P48631 (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max OX=3847 GN=FAD2-2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-34
Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPK KS I WY  Y NNPPG +++L  TLTLGWPLYLA N SGR Y+RFACHYDPYGP
Sbjct: 156 VFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGP 215

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI 232
           I++ RER+QIYISDAG+L + + L+R+  AKG  WV+
Sbjct: 216 IYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVV 252

[Close]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL
Match: A0A6J1FSC4 (delta(12)-oleate desaturase OS=Cucurbita moschata OX=3662 GN=LOC111448353 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 6.6e-44
Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GP
Sbjct: 147 VFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYLAFNVSGRPYDRFACHYDPHGP 206

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE +QIYISD GILGM FVLYRIG AKGALWV+R
Sbjct: 207 IFTKREWVQIYISDTGILGMCFVLYRIGVAKGALWVMR 244

[Close]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL
Match: A0A6J1H0J3 (delta(12)-oleate desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111459302 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 82/98 (83.67%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQIPWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R+ACHYDPY P
Sbjct: 142 VFVPKPKSQIPWYSKYFNNPPGRLISLIATLTLGWPLYLAFNVSGRPYDRWACHYDPYAP 201

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Sbjct: 202 IFTKREWIQVYISDAGILGMAFVLYRIAMAKGAFWVMR 239

[Close]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL
Match: A0A6J1K4R6 (delta(12)-oleate desaturase OS=Cucurbita maxima OX=3661 GN=LOC111490747 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41
Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQ+PWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R ACHYDPY P
Sbjct: 142 VFVPKPKSQVPWYSKYFNNPPGRLISLIATLTLGWPLYLAFNVSGRPYDRLACHYDPYAP 201

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR 233
           IFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Sbjct: 202 IFTKREWIQVYISDAGILGMAFVLYRIAMAKGAFWVMR 239

[Close]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL
Match: A0A2P6QMU7 (Putative oxidoreductase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0080581 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.9e-36
Identity = 73/97 (75.26%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKS+IPWY  YFNNPPG LIS++ TLTLGWPLYLAFN SGR Y+RFACHYDPYGP
Sbjct: 149 VFVPKPKSKIPWYNKYFNNPPGRLISIVFTLTLGWPLYLAFNVSGRPYDRFACHYDPYGP 208

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI 232
           IF+ RE +QIYISD GIL  A VLYRI  AKG  W++
Sbjct: 209 IFSDRETVQIYISDLGILVTASVLYRIAMAKGLAWLV 245

[Close]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL
Match: A0A2P5EEE4 (Fatty acid desaturase OS=Trema orientale OX=63057 GN=TorRG33x02_201950 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.6e-36
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPKPKSQ+ WY  Y NNPPG ++SLL TLTLGWPLYLAFN SGR Y+RFACHYDPYGP
Sbjct: 157 VFVPKPKSQMAWYSKYLNNPPGRVLSLLVTLTLGWPLYLAFNVSGRPYDRFACHYDPYGP 216

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI 232
           I++ RER+QI+ISDAGI  M FVLY++ AAKG  WV+
Sbjct: 217 IYSDRERLQIFISDAGIFLMTFVLYQLAAAKGLAWVV 253

[Close]

BLAST of CcUC02G041440 vs. TAIR 10
Match: AT3G12120.1 (fatty acid desaturase 2 )

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27
Identity = 56/92 (60.87%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPK KS I WY  Y NNP G ++ L     LGWPLYLAFN SGR Y+ FACH+ P  P
Sbjct: 156 VFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAP 215

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKG 227
           I+  RER+QIY+SDAGIL + F LYR  AA+G
Sbjct: 216 IYNDRERLQIYLSDAGILAVCFGLYRYAAAQG 247

[Close]

BLAST of CcUC02G041440 vs. TAIR 10
Match: AT3G12120.2 (fatty acid desaturase 2 )

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27
Identity = 56/92 (60.87%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 135 VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGP 194
           VFVPK KS I WY  Y NNP G ++ L     LGWPLYLAFN SGR Y+ FACH+ P  P
Sbjct: 156 VFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAP 215

Query: 195 IFTKRERIQIYISDAGILGMAFVLYRIGAAKG 227
           I+  RER+QIY+SDAGIL + F LYR  AA+G
Sbjct: 216 IYNDRERLQIYLSDAGILAVCFGLYRYAAAQG 247

The following BLAST results are available for this feature:

BLAST of CcUC02G041440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943671.1	1.4e-43	86.73	delta(12)-oleate desaturase [Cucurbita moschata]	[more]
KAG6570369.1	4.0e-43	84.69	Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
Q84UB9.1	8.9e-43	84.69	RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii...	[more]
XP_023512996.1	3.4e-42	84.69	delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo] >XP_023522472.1 delta(1...	[more]
XP_022957911.1	2.2e-41	83.67	delta(12)-oleate desaturase-like [Cucurbita moschata] >XP_023533966.1 delta(12)-...	[more]

BLAST of CcUC02G041440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84UB9	1.2e-45	84.69	Delta(12)-oleate desaturase OS=Trichosanthes kirilowii OX=3677 GN=FAD2 PE=2 SV=1	[more]
Q8GZC3	3.8e-36	71.13	Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV...	[more]
Q41131	3.2e-35	67.35	Oleate hydroxylase FAH12 OS=Ricinus communis OX=3988 GN=FAH12 PE=1 SV=2	[more]
Q84VT2	5.4e-35	63.92	Delta(12)-acyl-lipid-desaturase OS=Punica granatum OX=22663 GN=FAD12 PE=2 SV=2	[more]
P48631	2.1e-34	65.98	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max OX...	[more]

BLAST of CcUC02G041440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSC4	6.6e-44	86.73	delta(12)-oleate desaturase OS=Cucurbita moschata OX=3662 GN=LOC111448353 PE=3 S...	[more]
A0A6J1H0J3	1.1e-41	83.67	delta(12)-oleate desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111459302 P...	[more]
A0A6J1K4R6	1.8e-41	82.65	delta(12)-oleate desaturase OS=Cucurbita maxima OX=3661 GN=LOC111490747 PE=4 SV=...	[more]
A0A2P6QMU7	3.9e-36	75.26	Putative oxidoreductase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0080581 PE=3...	[more]
A0A2P5EEE4	6.6e-36	73.20	Fatty acid desaturase OS=Trema orientale OX=63057 GN=TorRG33x02_201950 PE=3 SV=1	[more]

BLAST of CcUC02G041440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12120.1	1.1e-27	60.87	fatty acid desaturase 2	[more]
AT3G12120.2	1.1e-27	60.87	fatty acid desaturase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	PANTHER	PTHR32100:SF40	OLEATE HYDROXYLASE FAH12	coord: 134..232
None	No IPR available	PANTHER	PTHR32100	OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC	coord: 134..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G041440.1	CcUC02G041440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water