CcUC02G041240 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G041240
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Lipoxygenase
Location	CicolChr02: 36418138 .. 36418662 (-)
RNA-Seq Expression	CcUC02G041240
Synteny	CcUC02G041240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCCAGTTCTCACCACTCCTCAAGACCTAATAGCATAGTAACAAACATTGCTTGGGTAGCATCAGCGCACCATGCAGCCGTGAACTTTGGGCAATATGCATATTCAGCGTGTTTCCCAAATAGGCCCAGTATAACAAGAACGAACATGCCCACAGAAGATTATAGTCCTGGACTTTGGAAAAGCTTTTTGGAAAAACCAGAAGAGTTGCTTCTTAATTCCTTCCCTTCACAATATCAAGCAACACAATGTTCATGGTGGATGTGTTATCAAGTCACTCACCAGATGAAGAGTCTTGGGAAGAATATGGAGCCGTCGTGGAAAGATAAGCTTGTCATAAAGGCAACATTTGAAAGGTTTAGGGCAAAGATGAAAGAATTGGAGTTGATAATTGATAATAGGAATGTTGATTTCAACTTGAAGAATAGAACTAGAGCTGGGTTTACTCCGTATGAACTTTTGAAGCCATTTTCAGGGCCTGAAGTGACTGGAAAGGGAGTTCCATATAGTATTTCTATTTAA

mRNA sequence

ATGGTGGCCAGTTCTCACCACTCCTCAAGACCTAATAGCATAGTAACAAACATTGCTTGGGTAGCATCAGCGCACCATGCAGCCGTGAACTTTGGGCAATATGCATATTCAGCGTGTTTCCCAAATAGGCCCAGTATAACAAGAACGAACATGCCCACAGAAGATTATAGTCCTGGACTTTGGAAAAGCTTTTTGGAAAAACCAGAAGAGTTGCTTCTTAATTCCTTCCCTTCACAATATCAAGCAACACAATGTTCATGGTGGATGTGTTATCAAGTCACTCACCAGATGAAGAGTCTTGGGAAGAATATGGAGCCGTCGTGGAAAGATAAGCTTGTCATAAAGGCAACATTTGAAAGGTTTAGGGCAAAGATGAAAGAATTGGAGTTGATAATTGATAATAGGAATGTTGATTTCAACTTGAAGAATAGAACTAGAGCTGGGTTTACTCCGTATGAACTTTTGAAGCCATTTTCAGGGCCTGAAGTGACTGGAAAGGGAGTTCCATATAGTATTTCTATTTAA

Coding sequence (CDS)

ATGGTGGCCAGTTCTCACCACTCCTCAAGACCTAATAGCATAGTAACAAACATTGCTTGGGTAGCATCAGCGCACCATGCAGCCGTGAACTTTGGGCAATATGCATATTCAGCGTGTTTCCCAAATAGGCCCAGTATAACAAGAACGAACATGCCCACAGAAGATTATAGTCCTGGACTTTGGAAAAGCTTTTTGGAAAAACCAGAAGAGTTGCTTCTTAATTCCTTCCCTTCACAATATCAAGCAACACAATGTTCATGGTGGATGTGTTATCAAGTCACTCACCAGATGAAGAGTCTTGGGAAGAATATGGAGCCGTCGTGGAAAGATAAGCTTGTCATAAAGGCAACATTTGAAAGGTTTAGGGCAAAGATGAAAGAATTGGAGTTGATAATTGATAATAGGAATGTTGATTTCAACTTGAAGAATAGAACTAGAGCTGGGTTTACTCCGTATGAACTTTTGAAGCCATTTTCAGGGCCTGAAGTGACTGGAAAGGGAGTTCCATATAGTATTTCTATTTAA

Protein sequence

MVASSHHSSRPNSIVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLLNSFPSQYQATQCSWWMCYQVTHQMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELIIDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI

Homology

[Close]

BLAST of CcUC02G041240 vs. NCBI nr
Match: XP_038901038.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 128/163 (78.53%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVTNIAWVASAHHAAVNFGQYAY+  FPNRPSITRTNMPTEDY+P LWKSFLEKPEELLL
Sbjct: 744 IVTNIAWVASAHHAAVNFGQYAYAGYFPNRPSITRTNMPTEDYNPALWKSFLEKPEELLL 803

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N+FPSQYQATQ    +    +H    + LGKNMEPSW D  VIKA FE+F AKMKELELI
Sbjct: 804 NAFPSQYQATQVMLVLNVLSSHSPDEEYLGKNMEPSWNDNHVIKAAFEKFSAKMKELELI 863

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID+RN D NLKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 864 IDHRNSDSNLKNRTGAGVTPYELLKPVSGPGVTGKGVPYSISI 906

[Close]

BLAST of CcUC02G041240 vs. NCBI nr
Match: XP_004142137.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus] >KGN54488.2 hypothetical protein Csa_018102 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 126/163 (77.30%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVTNIAWVASAHHAAVNFGQYAY+  FPNRPSI RTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 749 IVTNIAWVASAHHAAVNFGQYAYAGYFPNRPSIARTNMPTEDYNPTLWKSFLEKPEDLLL 808

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N+FPSQYQATQ  + +    +H    + LGKNMEPSW D  +IKA+FERF AK+KELELI
Sbjct: 809 NAFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPIIKASFERFSAKLKELELI 868

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKPFSGP VTGKGVPYSISI
Sbjct: 869 IDTRNVDPILKNRTGAGVTPYELLKPFSGPGVTGKGVPYSISI 911

[Close]

BLAST of CcUC02G041240 vs. NCBI nr
Match: KAA0041376.1 (linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 7.5e-62
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVT+IAWVASAHHAAVNFGQYAYS  FPNRPSITRTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 750 IVTSIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNMPTEDYNPTLWKSFLEKPEDLLL 809

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           NSFPSQYQATQ  + +    +H    + LGKNMEPSW D   IKA FERF A++KELELI
Sbjct: 810 NSFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPAIKAAFERFSARLKELELI 869

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 870 IDTRNVDPILKNRTGAGVTPYELLKPLSGPGVTGKGVPYSISI 912

[Close]

BLAST of CcUC02G041240 vs. NCBI nr
Match: XP_008449749.1 (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo] >TYK21640.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 7.5e-62
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVT+IAWVASAHHAAVNFGQYAYS  FPNRPSITRTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 750 IVTSIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNMPTEDYNPTLWKSFLEKPEDLLL 809

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           NSFPSQYQATQ  + +    +H    + LGKNMEPSW D   IKA FERF A++KELELI
Sbjct: 810 NSFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPAIKAAFERFSARLKELELI 869

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 870 IDTRNVDPILKNRTGAGVTPYELLKPLSGPGVTGKGVPYSISI 912

[Close]

BLAST of CcUC02G041240 vs. NCBI nr
Match: KAG6605891.1 (Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 123/163 (75.46%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVTNIAWVASAHHAAVNFGQYAY+  FP+RPSI RTNMPTED +P LWKSFLEKPEE+LL
Sbjct: 739 IVTNIAWVASAHHAAVNFGQYAYAGYFPSRPSIARTNMPTEDTNPALWKSFLEKPEEVLL 798

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N+FPSQYQATQ    +    +H    + LGKNMEPSW D   IKA F+RF  +MKELELI
Sbjct: 799 NAFPSQYQATQVMLVLDVLSSHSPDEEYLGKNMEPSWGDNPAIKAAFDRFNKRMKELELI 858

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID+RN DFNLKNRT AG TPYELLKPFSGP VTGKGVPYSISI
Sbjct: 859 IDHRNADFNLKNRTGAGVTPYELLKPFSGPGVTGKGVPYSISI 901

[Close]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot
Match: O24370 (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-43
Identity = 91/163 (55.83%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           I+T I WV S HHAAVNFGQY+Y+  FPNRP++ R+ MPTED +   W+ F+ KPEE LL
Sbjct: 737 IITTIVWVTSGHHAAVNFGQYSYAGYFPNRPTVARSKMPTEDPTAEEWEWFMNKPEEALL 796

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
             FPSQ QAT+    +     H    + +G+ +EP W +  VI A FE F  K+KELE I
Sbjct: 797 RCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELEGI 856

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RN D  L NR  AG  PYELLKP+S P VTGKGVPYSISI
Sbjct: 857 IDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPYSISI 899

[Close]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot
Match: R9WS04 (Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-41
Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           +V+ I WV+S HH+AVNFGQY +   FPNRP+I RT MP ED +   W++F+EKPE++LL
Sbjct: 737 VVSTIMWVSSGHHSAVNFGQYDFGGYFPNRPTIARTKMPNEDPTFEEWEAFMEKPEDVLL 796

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N FP+Q QAT+    +    +H    + +G +ME SW+ +  IK+ FE F  ++K+L+ I
Sbjct: 797 NCFPTQIQATKVMAILDVLSSHSPDEEYIGTSMEASWEAEPAIKSAFEEFCGRLKKLDDI 856

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID+RN D  L+NRT AG   Y+LLKPFSG  VTGKGVPYSISI
Sbjct: 857 IDSRNRDPILRNRTGAGLVQYQLLKPFSGHGVTGKGVPYSISI 899

[Close]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-40
Identity = 88/163 (53.99%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           +VT IAWV S HHAAVNFGQY Y   FPNRP+ TR  MPTED +    K F E PE++LL
Sbjct: 734 VVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLL 793

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
            ++PSQ QAT     +    TH    + +G+  E SW ++ VI A FERF+ K++ LE +
Sbjct: 794 KTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGV 853

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNV+  LKNR  AG   YELLKP S   VTG GVPYSISI
Sbjct: 854 IDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896

[Close]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot
Match: Q8GSM2 (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           I+T I WV S HHAAVNFGQY Y+  FPNRP++ R N+P E+      K F+ +PEE+LL
Sbjct: 734 ILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLL 793

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
            S PSQ QA +    +    +H    + +G+  EP+W  + ++KA FE+F  ++KE E  
Sbjct: 794 QSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGT 853

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RN +   KNR  AG  PYELLKPFS P VTG+G+P SISI
Sbjct: 854 IDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896

[Close]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot
Match: Q84YK8 (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.8e-33
Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 15  VTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPG-LWKSFLEKPEELLL 74
           +T I WVA+AHHAAVNFGQY +   FPNRPSI RT MP E+   G   + FL+ P++ L 
Sbjct: 779 LTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALR 838

Query: 75  NSFPSQYQATQCSWWMCYQVTHQM--KSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 134
             FPSQ QAT     +    TH    + LG      W     ++A +  F A++KE+E +
Sbjct: 839 ECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGV 898

Query: 135 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RN D  LKNR  AG  PY+L+KPFS   VTG G+P S SI
Sbjct: 899 IDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941

[Close]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL
Match: A0A5D3DDW6 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00020 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVT+IAWVASAHHAAVNFGQYAYS  FPNRPSITRTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 750 IVTSIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNMPTEDYNPTLWKSFLEKPEDLLL 809

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           NSFPSQYQATQ  + +    +H    + LGKNMEPSW D   IKA FERF A++KELELI
Sbjct: 810 NSFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPAIKAAFERFSARLKELELI 869

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 870 IDTRNVDPILKNRTGAGVTPYELLKPLSGPGVTGKGVPYSISI 912

[Close]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL
Match: A0A5A7TH45 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00210 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVT+IAWVASAHHAAVNFGQYAYS  FPNRPSITRTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 750 IVTSIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNMPTEDYNPTLWKSFLEKPEDLLL 809

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           NSFPSQYQATQ  + +    +H    + LGKNMEPSW D   IKA FERF A++KELELI
Sbjct: 810 NSFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPAIKAAFERFSARLKELELI 869

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 870 IDTRNVDPILKNRTGAGVTPYELLKPLSGPGVTGKGVPYSISI 912

[Close]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL
Match: A0A1S3BMR0 (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491540 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVT+IAWVASAHHAAVNFGQYAYS  FPNRPSITRTNMPTEDY+P LWKSFLEKPE+LLL
Sbjct: 750 IVTSIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNMPTEDYNPTLWKSFLEKPEDLLL 809

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           NSFPSQYQATQ  + +    +H    + LGKNMEPSW D   IKA FERF A++KELELI
Sbjct: 810 NSFPSQYQATQVMFTLNVLSSHSPDEEYLGKNMEPSWNDNPAIKAAFERFSARLKELELI 869

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNVD  LKNRT AG TPYELLKP SGP VTGKGVPYSISI
Sbjct: 870 IDTRNVDPILKNRTGAGVTPYELLKPLSGPGVTGKGVPYSISI 912

[Close]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL
Match: A0A6J1H2B7 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111459461 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61
Identity = 123/163 (75.46%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVTNIAWVASAHHAAVNFGQYAY+  FP+RPSI RTNMPTED +P LWKSFLEKPEE+LL
Sbjct: 740 IVTNIAWVASAHHAAVNFGQYAYAGYFPSRPSIARTNMPTEDTNPALWKSFLEKPEEVLL 799

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N+FPSQYQATQ    +    +H    + LGKNMEPSW D   IKA F+RF  +MKELELI
Sbjct: 800 NAFPSQYQATQVMLVLDVLSSHSPDEEYLGKNMEPSWGDNPAIKAAFDRFNKRMKELELI 859

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID+RN DFNLKNRT AG TPYELLKPFSGP VTGKGVPYSISI
Sbjct: 860 IDHRNADFNLKNRTGAGVTPYELLKPFSGPGVTGKGVPYSISI 902

[Close]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL
Match: A0A6J1JXK9 (Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111490700 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 123/163 (75.46%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           IVTNIAWVASAHHAAVNFGQYAY   FP+RPSI RTNMPTED +P LWKSFLEKPEE+LL
Sbjct: 740 IVTNIAWVASAHHAAVNFGQYAYGGYFPSRPSIARTNMPTEDTNPALWKSFLEKPEEVLL 799

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
           N+FPSQYQATQ    +    +H    + LGKNMEPSW D   IKA F+RF  +MKELELI
Sbjct: 800 NAFPSQYQATQVMLVLDVLSSHSPDEEYLGKNMEPSWGDNPAIKAAFDRFNKRMKELELI 859

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID+RN DFNLKNRT AG TPYELLKPFSGP VTGKGVPYSISI
Sbjct: 860 IDHRNADFNLKNRTGAGVTPYELLKPFSGPGVTGKGVPYSISI 902

[Close]

BLAST of CcUC02G041240 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 88/163 (53.99%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 14  IVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLL 73
           +VT IAWV S HHAAVNFGQY Y   FPNRP+ TR  MPTED +    K F E PE++LL
Sbjct: 734 VVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLL 793

Query: 74  NSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPSWKDKLVIKATFERFRAKMKELELI 133
            ++PSQ QAT     +    TH    + +G+  E SW ++ VI A FERF+ K++ LE +
Sbjct: 794 KTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGV 853

Query: 134 IDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ID RNV+  LKNR  AG   YELLKP S   VTG GVPYSISI
Sbjct: 854 IDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896

[Close]

BLAST of CcUC02G041240 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 68/165 (41.21%), Postives = 93/165 (56.36%), Query Frame = 0


Query: 13  SIVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELL 72
           S++T I W+ASA HAA+NFGQY Y    PNRP + R  +P  D S   + SF+E P++  
Sbjct: 764 SVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIP--DESDPEFTSFIEDPQKYF 823

Query: 73  LNSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPS-WKDKLVIKATFERFRAKMKELE 132
            +S PS  Q T+    +    TH    + +G+  +PS W     I   F  F A++  +E
Sbjct: 824 FSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIE 883

Query: 133 LIIDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
             ID RN D + +NR  AG  PYEL+ P S P VT +GVP S+SI
Sbjct: 884 KEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926

[Close]

BLAST of CcUC02G041240 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-25
Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 12  NSIVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEEL 71
           + I+TN+ W+AS  HAA+NFGQY +    PNRP++ R  +P E  +   ++ F+  P+  
Sbjct: 753 SQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQE--TDPDYEMFMRNPQYS 812

Query: 72  LLNSFPSQYQATQCSWWMCYQVTHQMKSLG-------KNMEPSW-KDKLVIKATFERFRA 131
            L S P+Q QAT+    M  Q T    S         + ++  W +D+ V+K  F +F  
Sbjct: 813 FLGSLPTQLQATKV---MAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVK-YFNKFSE 872

Query: 132 KMKELELIIDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
           ++ ++E  I+ RN D  LKNRT AG  PYELL P S   VTG+G+P SISI
Sbjct: 873 ELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917

[Close]

BLAST of CcUC02G041240 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 )

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-24
Identity = 67/165 (40.61%), Postives = 92/165 (55.76%), Query Frame = 0


Query: 13  SIVTNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELL 72
           SI+T + W+ASA HAA+NFGQY Y    PNRP + R  +P  D S   + SF+  PE+  
Sbjct: 757 SILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIP--DESDPEYASFISHPEKYY 816

Query: 73  LNSFPSQYQATQCSWWMCYQVTH--QMKSLGKNMEPS-WKDKLVIKATFERFRAKMKELE 132
            +S PS  Q ++    +    TH    + +G+  +PS W     I   F  F A++  +E
Sbjct: 817 FSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIE 876

Query: 133 LIIDNRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
             I+ RN D + +NR  AG  PYELL P S P VT +GVP S+SI
Sbjct: 877 KEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

[Close]

BLAST of CcUC02G041240 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-22
Identity = 65/161 (40.37%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 16  TNIAWVASAHHAAVNFGQYAYSACFPNRPSITRTNMPTEDYSPGLWKSFLEKPEELLLNS 75
           T I WVASA HAAVNFGQY  +   PNRP+I+R  MP E+     ++   + P+++ L +
Sbjct: 701 TIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMPKENTPE--FEELEKNPDKVFLKT 760

Query: 76  FPSQYQATQCSWWMCYQVTHQMKS--LGKNMEPSWKDKLVIKATFERFRAKMKELELIID 135
             +Q Q       +    TH      LG+     W  +      FE+F  K+KE+E  ID
Sbjct: 761 ITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNID 820

Query: 136 NRNVDFNLKNRTRAGFTPYELLKPFSGPEVTGKGVPYSISI 175
            RN D  LKNRT     PY LL P S   VTG+G+P S+SI
Sbjct: 821 ERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859

The following BLAST results are available for this feature:

BLAST of CcUC02G041240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901038.1	3.1e-63	78.53	linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]	[more]
XP_004142137.1	1.2e-62	77.30	linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus] >KGN54488.2 hypo...	[more]
KAA0041376.1	7.5e-62	77.30	linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]	[more]
XP_008449749.1	7.5e-62	77.30	PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo] >TY...	[more]
KAG6605891.1	3.7e-61	75.46	Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]

BLAST of CcUC02G041240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24370	2.1e-43	55.83	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]
R9WS04	2.6e-41	52.76	Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=...	[more]
P38418	2.2e-40	53.99	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
Q8GSM2	1.5e-36	49.08	Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1	[more]
Q84YK8	5.8e-33	47.24	Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CcUC02G041240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDW6	3.6e-62	77.30	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00020 P...	[more]
A0A5A7TH45	3.6e-62	77.30	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00210 P...	[more]
A0A1S3BMR0	3.6e-62	77.30	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491540 PE=3 SV=1	[more]
A0A6J1H2B7	1.8e-61	75.46	Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111459461 PE=3 SV=1	[more]
A0A6J1JXK9	2.4e-61	75.46	Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111490700 PE=3 SV=1	[more]

BLAST of CcUC02G041240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45140.1	1.6e-41	53.99	lipoxygenase 2	[more]
AT1G72520.1	3.5e-25	41.21	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G67560.1	7.8e-25	39.77	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	3.9e-24	40.61	lipoxygenase 3	[more]
AT1G55020.1	4.8e-22	40.37	lipoxygenase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 13..157 e-value: 1.3E-40 score: 139.5
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..174 score: 43.457996
None	No IPR available	GENE3D	1.20.245.10		coord: 9..173 e-value: 3.7E-37 score: 130.2
None	No IPR available	PANTHER	PTHR11771:SF89	LINOLEATE 13S-LIPOXYGENASE 2-1, CHLOROPLASTIC	coord: 13..173
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 13..173
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	48484	Lipoxigenase	coord: 13..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G041240.1	CcUC02G041240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0034440	lipid oxidation
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen