CcUC02G040250 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G040250
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pectinesterase
Location	CicolChr02: 35588368 .. 35591334 (-)
RNA-Seq Expression	CcUC02G040250
Synteny	CcUC02G040250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTAATGGCACGAAATTTAGTTAAATCACCTATTTCTCTCTTTATGAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAGTATATATATAGTAATAATAATAATAAAAATAAATATGCAGGCGGAGAGAGTGTTAAGGGGGATTGAGGGATTATTGGTGATTAGGAGAAATCGGGTTTCAGTTGGAGAAAGATCTCTAGGTGGTTTTTTTTATTAGTTAAGTTGCGTTGTAAGGAAAAGGAAAGAAAGGGGAAGAAGGGAAAGGTCAAAATCTCTCTCTCGACCACCTCTTCGTTACTCAGTCGCCGCCCCCTTCAGCCCTCATTGTCTCCATCATCTCCAGCCCTCACTGTCGCTGTCATCGCGGTACTAATCGCTACCGTCATCAGCACTTGTCACCATCATCGCAGCTTTCAGCGTAGCGGCACCATCATAATCCTCGCGCCGCAACGTTTCAGTCCATGGCTACATCATCAATCCATCGCCGCATCGTCACAGCCCGCACATCACCGCATCATCATAGTCTTCATCGCCACGTCGCCTCAGCCCTCTCCGCGACGCGTCGACACAACTTTCATAGCACACTGCCGCAGTGTAAGGGAGTCGCTCAGTCTCGCTGTCTCGCTCAGTCTCGCTGGTAAGGGACTTACTACCGGGCTTTAAGTGACGCCTAATGTCTAATTGTGTTATTGAACTACTGAATGTCGCTGTGTAACGTTTGCCTCGGTGTTGATTGCTATGATTGTTTCGATATGCCAAGTTTGTAGCTCGTATGCAATGTACATATGATTATGTGCCTATGACTCTGTGAAACTCTGCGATGAACTAGATATGCCATGACATGTTACAGGTTACCTCACTTGTCGTGCCCCGTACCCCTAATGTACTATGTTATGAAGGGTGTCCCTCGGAATCACCACCTATGTTCATGTTACAAATGTAATCACTGCGTACCCTCGGGCCGCTTCCTATGCTTATGCCTATGCTTATGCCTACGCTTATGTCTATGCCGGGTACTCGGGTGCACACGACAAAAAGAGTGATAGCTAGGCCCAGTAGTGGGCCCCTTGCTGAGTATAATTGCTCACCCTTTTCTATGTTTTTCTCTCAGGTAAGGAGTATGGTGGTCAAGCGCATGGCCGAGGAAATCCGTGATCGTACCATGGGACCGTCGACACTGCTTCCGCACCATAACCTAGGGTATAGCGTACTGGAGTTGTGGGGTGGTAGTATTTGCATACATTGGACCGTTTATTATTTGTTTTGTTTATTGTTATGTTCGGATTTTTTCTTGAGGTTTTGCCTAACTATTTAAGGGGTACCCCGCTAAAGCATTTTATTTAATAAACTATTAAGAAGTTCAGCCATTTTATAAATTTGACCAAGTTTATCTAAAGTGTGTCAAACTGTGTCTCTTAGTTTCCAACGCATTTACTAAATGGTCATGCATGACGTAGCGACGTGTTAGTTATTAAAGGGCCAGGTCGTTACAGATGCTGCCAAATATGACACCGTTTACAGTGCAACCTTGATTGTTGAGTCTGATTATTCACCGCCGCCAATCTCATCATTGAGGTATTATTTTTTTTAGGAACGATTCACCCTAATTACATGCTCCCTCTCTTTTACCAACAACGAATTTTAGAAAAATAATAAAAATGTCGAATTTATGTCTAATGGATTAATTGATTTTTTTTTCAAAAAAAAAAAAATTGAATATCTTAAGTTTCATATGTAACTTTTCTTAATAGCCTTAGTTATCTATTATATATAGTATTAAAAACATTGGATTAAAATAGATACAAACATAAGTGTTGATCAATGAATAACTAAACTTAATTTAATCATAGTTTTATTATATTACCTTTTTTGTGGTTTAGTAATTAAAACTGCATGCCAATCATTTTTTTTCTTTTTATTAATGGGGAATTATTATTATTTTTTTGTTATATTTGTTTGAAAAGTAATTCCAGAATTCATCCCAAGGCCAGATGGGAAAAGAAAAGGAGCACAAGCATTAGTAGCAAGACTATTAGGGACTAAAGCGGCAGTATACAATTGCAAATTCTATGGATTTCAAGATACCCTTTGCGACGACGACGGTTTGCATCTCTACAAAGATTGCTTCGTTCAAGGCACCGTCGACTTCATTTTCGGAAAGGGAACATCTCTTTATTTGGTACTTCCAAATTGCCCTTCAAACAAAAATTATATAATTAATATAATTATAACATAATGTTTTTGAGATTTAATAATAACATGGTAATTTCATATAAATATATTTGTGTGAGAATAATTGCAGAATAGTCAATTGGATGTGGTGGGAGACGGAGGATTGGGAGTGATCACGGCCCATTCAAGGGAACAGGAATCGGACGGAAGTGGATATTCGTTCGTGCATTGTAGCATTACGGGAATTGGTGGCAAAAACACTTATTTGGGAAGAGCTTGGATGCCGAGATCTAGGGTTGTTTTCGCCTACACTACAATAGCTGACATCATTCATTTTGAAGGCTGGAACGATATGAACCATGCCGGTTTCGACGCATAATTACCAAATTCTCTATATTTTTAATTGGGCACGACACATTTCAAAGTTACGTTCAAGGTGCTTTAGGATGTGACAGTCACATTGAATAACTTTTTTCTTTTATTTTTTACACAGTATGATTTTGTTTGGAGAATATAAGTGTTCGGGACCAGGATCGGAGCCGAGCGGACGTGTAAAATATAGCAAGCAATTGAGTAATATAGAAGTGAAACCGTTCATTAATCTTGGCTACGTGTAGAGCGAGAAGTGGTTGCTTCCTCCTCCCAATCCTCAAGCTTAAGAGTTTTAGGATATATTTGTAATTAGCTGTGTCTTTTGTTATTTTTTTGCTATTTATATTCATATTATTTGTATGTCTAATCTTATTAATAAAAATTTGGGCAAGTTATTTACTCTTGAGTTCCTTAATATGGTA

mRNA sequence

ATGCTTCGCCGCCCCCTTCAGCCCTCATTGTCTCCATCATCTCCAGCCCTCACTGTCGCTGTCATCGCGGTACTAATCGCTACCGTCATCAGCACTTGTCACCATCATCGCAGCTTTCAGCGTAGCGGCACCATCATAATCCTCGCGCCGCAACTAATTCCAGAATTCATCCCAAGGCCAGATGGGAAAAGAAAAGGAGCACAAGCATTAGTAGCAAGACTATTAGGGACTAAAGCGGCAGTATACAATTGCAAATTCTATGGATTTCAAGATACCCTTTGCGACGACGACGGTTTGCATCTCTACAAAGATTGCTTCGTTCAAGGCACCGTCGACTTCATTTTCGGAAAGGGAACATCTCTTTATTTGAATAGTCAATTGGATGTGGTGGGAGACGGAGGATTGGGAGTGATCACGGCCCATTCAAGGGAACAGGAATCGGACGGAAGTGGATATTCGTTCGTGCATTGTAGCATTACGGGAATTGGTGGCAAAAACACTTATTTGGGAAGAGCTTGGATGCCGAGATCTAGGGTTGTTTTCGCCTACACTACAATAGCTGACATCATTCATTTTGAAGGCTGGAACGATATGAACCATGCCGGTTTCGACGCATAATTACCAAATTCTCTATATTTTTAATTGGGCACGACACATTTCAAAGTTACGTTCAAGGTGCTTTAGGATGTGACAGTCACATTGAATAACTTTTTTCTTTTATTTTTTACACAGTATGATTTTGTTTGGAGAATATAAGTGTTCGGGACCAGGATCGGAGCCGAGCGGACGTGTAAAATATAGCAAGCAATTGAGTAATATAGAAGTGAAACCGTTCATTAATCTTGGCTACGTGTAGAGCGAGAAGTGGTTGCTTCCTCCTCCCAATCCTCAAGCTTAAGAGTTTTAGGATATATTTGTAATTAGCTGTGTCTTTTGTTATTTTTTTGCTATTTATATTCATATTATTTGTATGTCTAATCTTATTAATAAAAATTTGGGCAAGTTATTTACTCTTGAGTTCCTTAATATGGTA

Coding sequence (CDS)

ATGCTTCGCCGCCCCCTTCAGCCCTCATTGTCTCCATCATCTCCAGCCCTCACTGTCGCTGTCATCGCGGTACTAATCGCTACCGTCATCAGCACTTGTCACCATCATCGCAGCTTTCAGCGTAGCGGCACCATCATAATCCTCGCGCCGCAACTAATTCCAGAATTCATCCCAAGGCCAGATGGGAAAAGAAAAGGAGCACAAGCATTAGTAGCAAGACTATTAGGGACTAAAGCGGCAGTATACAATTGCAAATTCTATGGATTTCAAGATACCCTTTGCGACGACGACGGTTTGCATCTCTACAAAGATTGCTTCGTTCAAGGCACCGTCGACTTCATTTTCGGAAAGGGAACATCTCTTTATTTGAATAGTCAATTGGATGTGGTGGGAGACGGAGGATTGGGAGTGATCACGGCCCATTCAAGGGAACAGGAATCGGACGGAAGTGGATATTCGTTCGTGCATTGTAGCATTACGGGAATTGGTGGCAAAAACACTTATTTGGGAAGAGCTTGGATGCCGAGATCTAGGGTTGTTTTCGCCTACACTACAATAGCTGACATCATTCATTTTGAAGGCTGGAACGATATGAACCATGCCGGTTTCGACGCATAA

Protein sequence

MLRRPLQPSLSPSSPALTVAVIAVLIATVISTCHHHRSFQRSGTIIILAPQLIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFDA

Homology

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BLAST of CcUC02G040250 vs. NCBI nr
Match: XP_038902684.1 (putative pectinesterase 63 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 133/159 (83.65%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 47  ILAPQLIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCF 106
           + A  +I    PRPDG RKGAQAL ARL+GTKAA+YNCKF GFQDTLCDD+GLHLYKDCF
Sbjct: 156 VAANLVIENSSPRPDGIRKGAQALAARLMGTKAAIYNCKFIGFQDTLCDDEGLHLYKDCF 215

Query: 107 VQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKN 166
           +QGTVDFIFGKGTSLYLNS+LDVVGDGGL VITAHSRE+ESD SGYSF HCSITG GGKN
Sbjct: 216 IQGTVDFIFGKGTSLYLNSRLDVVGDGGLAVITAHSREEESDSSGYSFAHCSITGTGGKN 275

Query: 167 TYLGRAWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFDA 206
           TYLGRAWMPRSRVVFAYTT+ADIIH EGWNDMNH+G+DA
Sbjct: 276 TYLGRAWMPRSRVVFAYTTMADIIHAEGWNDMNHSGYDA 314

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BLAST of CcUC02G040250 vs. NCBI nr
Match: XP_011657599.1 (putative pectinesterase 63 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 132/153 (86.27%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 52  LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTV 111
           +I    PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTV
Sbjct: 163 IIENSSPRPDGVRKGAQALAARFMGTKAAIYNCKFLGFQDTLCDDDGLHFYKDCFIQGTV 222

Query: 112 DFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGR 171
           DFIFGKGTSLYLN+QLDV GDGGL VITAHSREQE+D SGYSFVHCSITG GGKNTYLGR
Sbjct: 223 DFIFGKGTSLYLNTQLDVAGDGGLAVITAHSREQEADTSGYSFVHCSITGTGGKNTYLGR 282

Query: 172 AWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFD 205
           AWMPRSRVVFAYTTIADIIH EGWNDM HAGFD
Sbjct: 283 AWMPRSRVVFAYTTIADIIHPEGWNDMKHAGFD 315

[Close]

BLAST of CcUC02G040250 vs. NCBI nr
Match: XP_016900732.1 (PREDICTED: pectinesterase PPME1-like [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTVDFIFGK
Sbjct: 163 PRPDGVRKGAQALAARFMGTKAAIYNCKFTGFQDTLCDDDGLHFYKDCFIQGTVDFIFGK 222

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLY+N+QLDV GDGGL VITAHSREQESDGSGYSFVHCSITG GGKNT+LGRAWMPRS
Sbjct: 223 GTSLYVNTQLDVAGDGGLAVITAHSREQESDGSGYSFVHCSITGTGGKNTFLGRAWMPRS 282

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDM HAGFD
Sbjct: 283 RVVFAYTTMADIIHPEGWNDMKHAGFD 309

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BLAST of CcUC02G040250 vs. NCBI nr
Match: KAA0061749.1 (pectinesterase PPME1-like [Cucumis melo var. makuwa] >TYJ96089.1 pectinesterase PPME1-like [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTVDFIFGK
Sbjct: 167 PRPDGVRKGAQALAARFMGTKAAIYNCKFTGFQDTLCDDDGLHFYKDCFIQGTVDFIFGK 226

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLY+N+QLDV GDGGL VITAHSREQESDGSGYSFVHCSITG GGKNT+LGRAWMPRS
Sbjct: 227 GTSLYVNTQLDVAGDGGLAVITAHSREQESDGSGYSFVHCSITGTGGKNTFLGRAWMPRS 286

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDM HAGFD
Sbjct: 287 RVVFAYTTMADIIHPEGWNDMKHAGFD 313

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BLAST of CcUC02G040250 vs. NCBI nr
Match: XP_008449623.1 (PREDICTED: putative pectinesterase 63 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-72
Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR+ G KAA+YNCKF GFQDTLCDDDGLHLYKDCF+QGTVDFIFGK
Sbjct: 168 PRPDGVRKGAQALAARIRGNKAAIYNCKFIGFQDTLCDDDGLHLYKDCFIQGTVDFIFGK 227

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLYLN+QLDVVG+GGLGVI AHSR+QESDGSGYSFVHCSITG GG+NTYLGRAW PRS
Sbjct: 228 GTSLYLNTQLDVVGNGGLGVIAAHSRDQESDGSGYSFVHCSITGTGGRNTYLGRAWRPRS 287

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDMNH G+D
Sbjct: 288 RVVFAYTTMADIIHPEGWNDMNHFGYD 314

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BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot
Match: Q9FKF3 (Putative pectinesterase 63 OS=Arabidopsis thaliana OX=3702 GN=PME63 PE=3 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 90/169 (53.25%), Postives = 119/169 (70.41%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S T+I+L+        ++    P PDGKRKGAQAL  R+ G KAA YNCKFYG+QDT+CD
Sbjct: 119 SATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICD 178

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+++GT DFIFG G SLYL +QL+VVGD G+ VITAH+ +  ++ SGYSFV
Sbjct: 179 DTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGD-GIRVITAHAGKSAAEKSGYSFV 238

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFD 205
           HC +TG  G   YLGR+WM   +VV+AYT ++ +++  GW +   AG D
Sbjct: 239 HCKVTGT-GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRD 285

[Close]

BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot
Match: Q9LY19 (Probable pectinesterase 48 OS=Arabidopsis thaliana OX=3702 GN=PME48 PE=2 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S ++IIL+        ++    P PDGK KGAQAL  R+ G  AA YNCKFYGFQDT+CD
Sbjct: 142 SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICD 201

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+V+GT DFIFG GTS+YL +QL VVGD G+ VI AH+ +   + SGYSFV
Sbjct: 202 DTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGD-GIRVIAAHAGKSAEEKSGYSFV 261

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWND 198
           HC +TG GG   YLGRAWM   +VV+AYT +  +++  GW +
Sbjct: 262 HCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301

[Close]

BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot
Match: Q84WM7 (Pectinesterase PPME1 OS=Arabidopsis thaliana OX=3702 GN=PPME1 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S ++IIL+        ++    P PDGK KGAQAL  R+ G  AA YNCKFYGFQDT+CD
Sbjct: 142 SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICD 201

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+V+GT DFIFG GTS+YL +QL VVGD G+ VI AH+ +   + SGYSFV
Sbjct: 202 DTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGD-GIRVIAAHAGKSAEEKSGYSFV 261

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWND 198
           HC +TG GG   YLGRAWM   +VV+AYT +  +++  GW +
Sbjct: 262 HCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301

[Close]

BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot
Match: B2VPR8 (Pectinesterase 2 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-43
Identity = 80/138 (57.97%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDGKR GAQA   R+ G KA+ YN K YGFQDTLCDD G H YKDC+++GTVDFIFG 
Sbjct: 166 PRPDGKRVGAQAAALRISGDKASFYNVKIYGFQDTLCDDKGKHFYKDCYIEGTVDFIFGS 225

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           G S++LN++L  V      +ITA +R+ ES+ +GY FV+C +TG G    +LGR+WMP +
Sbjct: 226 GKSIFLNTELHAVPGDQPAIITAQARKTESEDTGYYFVNCRVTGGG---AFLGRSWMPAA 285

Query: 178 RVVFAYTTIADIIHFEGW 196
           +VVFAYT + D IH EGW
Sbjct: 286 KVVFAYTEMGDAIHPEGW 300

[Close]

BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot
Match: D8VPP5 (Pectinesterase 1 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-43
Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDGKR GAQA   R+ G KA+ YN K YGFQDTLCDD G H YKDC+++GTVDFIFG 
Sbjct: 166 PRPDGKRVGAQAAALRISGDKASFYNVKIYGFQDTLCDDKGKHFYKDCYIEGTVDFIFGS 225

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           G S++LN++L  V      +ITA +R+ +S+ +GY FV+C +TG G    +LGR+WMP +
Sbjct: 226 GKSIFLNTELHAVPGDQPAIITAQARKTDSEDTGYYFVNCRVTGGG---AFLGRSWMPAA 285

Query: 178 RVVFAYTTIADIIHFEGW 196
           +VVFAYT + D IH EGW
Sbjct: 286 KVVFAYTEMVDAIHPEGW 300

[Close]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL
Match: A0A0A0KEH2 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_6G428030 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.4e-74
Identity = 132/153 (86.27%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 52  LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTV 111
           +I    PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTV
Sbjct: 163 IIENSSPRPDGVRKGAQALAARFMGTKAAIYNCKFLGFQDTLCDDDGLHFYKDCFIQGTV 222

Query: 112 DFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGR 171
           DFIFGKGTSLYLN+QLDV GDGGL VITAHSREQE+D SGYSFVHCSITG GGKNTYLGR
Sbjct: 223 DFIFGKGTSLYLNTQLDVAGDGGLAVITAHSREQEADTSGYSFVHCSITGTGGKNTYLGR 282

Query: 172 AWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFD 205
           AWMPRSRVVFAYTTIADIIH EGWNDM HAGFD
Sbjct: 283 AWMPRSRVVFAYTTIADIIHPEGWNDMKHAGFD 315

[Close]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL
Match: A0A5A7V7V3 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00480 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTVDFIFGK
Sbjct: 167 PRPDGVRKGAQALAARFMGTKAAIYNCKFTGFQDTLCDDDGLHFYKDCFIQGTVDFIFGK 226

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLY+N+QLDV GDGGL VITAHSREQESDGSGYSFVHCSITG GGKNT+LGRAWMPRS
Sbjct: 227 GTSLYVNTQLDVAGDGGLAVITAHSREQESDGSGYSFVHCSITGTGGKNTFLGRAWMPRS 286

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDM HAGFD
Sbjct: 287 RVVFAYTTMADIIHPEGWNDMKHAGFD 313

[Close]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL
Match: A0A1S4DXM9 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103491454 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 130/147 (88.44%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR +GTKAA+YNCKF GFQDTLCDDDGLH YKDCF+QGTVDFIFGK
Sbjct: 163 PRPDGVRKGAQALAARFMGTKAAIYNCKFTGFQDTLCDDDGLHFYKDCFIQGTVDFIFGK 222

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLY+N+QLDV GDGGL VITAHSREQESDGSGYSFVHCSITG GGKNT+LGRAWMPRS
Sbjct: 223 GTSLYVNTQLDVAGDGGLAVITAHSREQESDGSGYSFVHCSITGTGGKNTFLGRAWMPRS 282

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDM HAGFD
Sbjct: 283 RVVFAYTTMADIIHPEGWNDMKHAGFD 309

[Close]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL
Match: A0A5D3B8A8 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00490 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR+ G KAA+YNCKF GFQDTLCDDDGLHLYKDCF+QGTVDFIFGK
Sbjct: 154 PRPDGVRKGAQALAARIRGNKAAIYNCKFIGFQDTLCDDDGLHLYKDCFIQGTVDFIFGK 213

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLYLN+QLDVVG+GGLGVI AHSR+QESDGSGYSFVHCSITG GG+NTYLGRAW PRS
Sbjct: 214 GTSLYLNTQLDVVGNGGLGVIAAHSRDQESDGSGYSFVHCSITGTGGRNTYLGRAWRPRS 273

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDMNH G+D
Sbjct: 274 RVVFAYTTMADIIHPEGWNDMNHFGYD 300

[Close]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL
Match: A0A1S3BMG4 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103491453 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 58  PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFGK 117
           PRPDG RKGAQAL AR+ G KAA+YNCKF GFQDTLCDDDGLHLYKDCF+QGTVDFIFGK
Sbjct: 168 PRPDGVRKGAQALAARIRGNKAAIYNCKFIGFQDTLCDDDGLHLYKDCFIQGTVDFIFGK 227

Query: 118 GTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPRS 177
           GTSLYLN+QLDVVG+GGLGVI AHSR+QESDGSGYSFVHCSITG GG+NTYLGRAW PRS
Sbjct: 228 GTSLYLNTQLDVVGNGGLGVIAAHSRDQESDGSGYSFVHCSITGTGGRNTYLGRAWRPRS 287

Query: 178 RVVFAYTTIADIIHFEGWNDMNHAGFD 205
           RVVFAYTT+ADIIH EGWNDMNH G+D
Sbjct: 288 RVVFAYTTMADIIHPEGWNDMNHFGYD 314

[Close]

BLAST of CcUC02G040250 vs. TAIR 10
Match: AT5G61680.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49
Identity = 90/169 (53.25%), Postives = 119/169 (70.41%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S T+I+L+        ++    P PDGKRKGAQAL  R+ G KAA YNCKFYG+QDT+CD
Sbjct: 119 SATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICD 178

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+++GT DFIFG G SLYL +QL+VVGD G+ VITAH+ +  ++ SGYSFV
Sbjct: 179 DTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGD-GIRVITAHAGKSAAEKSGYSFV 238

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWNDMNHAGFD 205
           HC +TG  G   YLGR+WM   +VV+AYT ++ +++  GW +   AG D
Sbjct: 239 HCKVTGT-GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRD 285

[Close]

BLAST of CcUC02G040250 vs. TAIR 10
Match: AT1G69940.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S ++IIL+        ++    P PDGK KGAQAL  R+ G  AA YNCKFYGFQDT+CD
Sbjct: 142 SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICD 201

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+V+GT DFIFG GTS+YL +QL VVGD G+ VI AH+ +   + SGYSFV
Sbjct: 202 DTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGD-GIRVIAAHAGKSAEEKSGYSFV 261

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWND 198
           HC +TG GG   YLGRAWM   +VV+AYT +  +++  GW +
Sbjct: 262 HCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301

[Close]

BLAST of CcUC02G040250 vs. TAIR 10
Match: AT5G07410.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-47
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 0


Query: 42  SGTIIILAPQ------LIPEFIPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S ++IIL+        ++    P PDGK KGAQAL  R+ G  AA YNCKFYGFQDT+CD
Sbjct: 142 SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICD 201

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +KDC+V+GT DFIFG GTS+YL +QL VVGD G+ VI AH+ +   + SGYSFV
Sbjct: 202 DTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGD-GIRVIAAHAGKSAEEKSGYSFV 261

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWND 198
           HC +TG GG   YLGRAWM   +VV+AYT +  +++  GW +
Sbjct: 262 HCKVTGTGG-GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQE 301

[Close]

BLAST of CcUC02G040250 vs. TAIR 10
Match: AT5G07420.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-42
Identity = 80/162 (49.38%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 42  SGTIIILAPQLIPEFI------PRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCD 101
           S T+I+ A   +   +      P P    +G QAL  R+ G KAA YNC+FYGFQDTLCD
Sbjct: 143 SATLIVWATNFLAANLNIINTSPMPKPGTQG-QALAMRINGDKAAFYNCRFYGFQDTLCD 202

Query: 102 DDGLHLYKDCFVQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFV 161
           D G H +K+C+++GT DFIFG+G SLYL +QL  VGD GL VI AH+R+  ++ +GYSFV
Sbjct: 203 DRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVGD-GLRVIAAHNRQSTTEQNGYSFV 262

Query: 162 HCSITGIGGKNTYLGRAWMPRSRVVFAYTTIADIIHFEGWND 198
           HC +TG+ G   YLGRAWM   +VV++YT ++ +++  GW +
Sbjct: 263 HCKVTGV-GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQE 301

[Close]

BLAST of CcUC02G040250 vs. TAIR 10
Match: AT5G07430.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.4e-41
Identity = 74/148 (50.00%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 57  IPRPDGKRKGAQALVARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFVQGTVDFIFG 116
           +P+P  +    QAL  R+   KAA Y+C+F+GFQDTLCDD G H +KDC+++GT DFIFG
Sbjct: 166 MPKPGSQ---GQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFG 225

Query: 117 KGTSLYLNSQLDVVGDGGLGVITAHSREQESDGSGYSFVHCSITGIGGKNTYLGRAWMPR 176
           +G SLYLN+QL  VGD GL VITA  R+  ++ +GY+FVHC +TG  G   YLGR+WM  
Sbjct: 226 RGASLYLNTQLHAVGD-GLRVITAQGRQSATEQNGYTFVHCKVTGT-GTGIYLGRSWMSH 285

Query: 177 SRVVFAYTTIADIIHFEGWNDMNHAGFD 205
            +VV+A+T +  +++  GW +  + G+D
Sbjct: 286 PKVVYAFTEMTSVVNPSGWRENLNRGYD 308

The following BLAST results are available for this feature:

BLAST of CcUC02G040250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902684.1	1.2e-74	83.65	putative pectinesterase 63 [Benincasa hispida]	[more]
XP_011657599.1	1.3e-73	86.27	putative pectinesterase 63 [Cucumis sativus]	[more]
XP_016900732.1	2.2e-73	88.44	PREDICTED: pectinesterase PPME1-like [Cucumis melo]	[more]
KAA0061749.1	2.2e-73	88.44	pectinesterase PPME1-like [Cucumis melo var. makuwa] >TYJ96089.1 pectinesterase ...	[more]
XP_008449623.1	3.2e-72	87.07	PREDICTED: putative pectinesterase 63 [Cucumis melo]	[more]

BLAST of CcUC02G040250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKF3	1.5e-48	53.25	Putative pectinesterase 63 OS=Arabidopsis thaliana OX=3702 GN=PME63 PE=3 SV=2	[more]
Q9LY19	4.2e-46	54.32	Probable pectinesterase 48 OS=Arabidopsis thaliana OX=3702 GN=PME48 PE=2 SV=2	[more]
Q84WM7	4.2e-46	54.32	Pectinesterase PPME1 OS=Arabidopsis thaliana OX=3702 GN=PPME1 PE=1 SV=1	[more]
B2VPR8	2.5e-43	57.97	Pectinesterase 2 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
D8VPP5	5.6e-43	57.25	Pectinesterase 1 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of CcUC02G040250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEH2	6.4e-74	86.27	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_6G428030 PE=4 SV=1	[more]
A0A5A7V7V3	1.1e-73	88.44	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00480...	[more]
A0A1S4DXM9	1.1e-73	88.44	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103491454 PE=4 SV=1	[more]
A0A5D3B8A8	1.6e-72	87.07	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00490...	[more]
A0A1S3BMG4	1.6e-72	87.07	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103491453 PE=4 SV=1	[more]

BLAST of CcUC02G040250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61680.1	1.1e-49	53.25	Pectin lyase-like superfamily protein	[more]
AT1G69940.1	2.9e-47	54.32	Pectin lyase-like superfamily protein	[more]
AT5G07410.1	2.9e-47	54.32	Pectin lyase-like superfamily protein	[more]
AT5G07420.1	2.2e-42	49.38	Pectin lyase-like superfamily protein	[more]
AT5G07430.1	5.4e-41	50.00	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 39..205 e-value: 5.1E-48 score: 166.1
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 66..199 e-value: 1.2E-25 score: 89.9
None	No IPR available	PANTHER	PTHR31321	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	coord: 41..200
None	No IPR available	PANTHER	PTHR31321:SF87	PECTINESTERASE 63-RELATED	coord: 41..200
IPR033131	Pectinesterase, Asp active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 107..116
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 64..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G040250.1	CcUC02G040250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0030599	pectinesterase activity