CcUC02G039000 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G039000
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor TCP7
Location	CicolChr02: 34409189 .. 34409737 (-)
RNA-Seq Expression	CcUC02G039000
Synteny	CcUC02G039000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAAAAAACATGAGAGTTAAGAAGGCTACATCTAACTCCCCAAGAAATGCACCAAAATCCAACTCACCAAATTCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCACCGTTGTGTGCAGCTCGCGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACTGTAGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTTTAACTGGTAAAGATATTGCCTCTGCTAGTCTCGATTTGCCTGGCTGCAAGCCTTTTGATCCAACTTCATCAAATCTTTCTACTACTACAAGCTGCTTTGAAGAAGAAACATTTGGTGTAAACAACTATGCTTTTCCAATAGTTAATGAATGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATCGCCACGCTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAGACGACGATGACTGA

mRNA sequence

ATGGGTTCAAAAAACATGAGAGTTAAGAAGGCTACATCTAACTCCCCAAGAAATGCACCAAAATCCAACTCACCAAATTCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCACCGTTGTGTGCAGCTCGCGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACTGTAGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTTTAACTGGTAAAGATATTGCCTCTGCTAGTCTCGATTTGCCTGGCTGCAAGCCTTTTGATCCAACTTCATCAAATCTTTCTACTACTACAAGCTGCTTTGAAGAAGAAACATTTGGTGTAAACAACTATGCTTTTCCAATAGTTAATGAATGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATCGCCACGCTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAGACGACGATGACTGA

Coding sequence (CDS)

ATGGGTTCAAAAAACATGAGAGTTAAGAAGGCTACATCTAACTCCCCAAGAAATGCACCAAAATCCAACTCACCAAATTCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCACCGTTGTGTGCAGCTCGCGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACTGTAGAGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTTTAACTGGTAAAGATATTGCCTCTGCTAGTCTCGATTTGCCTGGCTGCAAGCCTTTTGATCCAACTTCATCAAATCTTTCTACTACTACAAGCTGCTTTGAAGAAGAAACATTTGGTGTAAACAACTATGCTTTTCCAATAGTTAATGAATGCATACCTTTGCCAAATTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATCGCCACGCTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAGACGACGATGACTGA

Protein sequence

MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLSTTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDDDD

Homology

[Close]

BLAST of CcUC02G039000 vs. NCBI nr
Match: XP_038900506.1 (transcription factor TCP16-like [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 7.3e-84
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNM+VKKATSNSPRNAPK NSPN+SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMKVKKATSNSPRNAPKPNSPNASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDP-TSSNLST 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA+LDLPGCKPFDP +SSNLST
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLPGCKPFDPSSSSNLST 120

Query: 121 TTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQED 180
           TT+ F EETF  NNYAFP+ NECIPLPNYEFDLVSDFDMELFAHHIA LQEVAENSE+E 
Sbjct: 121 TTNFF-EETFDGNNYAFPMANECIPLPNYEFDLVSDFDMELFAHHIAMLQEVAENSERET 180

Query: 181 DDD 183
           +DD
Sbjct: 181 EDD 182

[Close]

BLAST of CcUC02G039000 vs. NCBI nr
Match: XP_008465370.1 (PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription factor TCP7 [Cucumis melo var. makuwa] >TYK22396.1 transcription factor TCP7 [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVKK TSNSPRNAPK NSP +SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGC-KPFDPTSSNL-S 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA+LDLPGC KPFDP+SSN+ S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTS FEEET G NNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 DDD 182
            +D
Sbjct: 181 TED 183

[Close]

BLAST of CcUC02G039000 vs. NCBI nr
Match: XP_004145813.1 (transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa_020689 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 165/184 (89.67%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSK+MRVK+ TSNSPRNAPK NSP +SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGC-KPFDPTSSNL-S 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA+LDLPGC KP DP+SSN  S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTS FEEET G NNYAFP+VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 DDDD 183
            +DD
Sbjct: 181 TEDD 184

[Close]

BLAST of CcUC02G039000 vs. NCBI nr
Match: XP_022140679.1 (transcription factor TCP15-like [Momordica charantia])

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 153/184 (83.15%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPK--SNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATS+SPRNAPK  SNSPN+SESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLS 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA+L+L  C P  P+SSNLS
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP-SPSSSNLS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
            TTSCF++ET   NNY FP+ N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN EQ+
Sbjct: 121 ATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQD 178

Query: 181 DDDD 183
           D  D
Sbjct: 181 DGQD 178

[Close]

BLAST of CcUC02G039000 vs. NCBI nr
Match: XP_022996075.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 270.8 bits (691), Expect = 8.7e-69
Identity = 145/182 (79.67%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVKKATSNSPR       PN+SESK IPSKA KDRHAKV GRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKATSNSPRGV-----PNASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLSTT 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA+ +L GCKP DP+SS  +TT
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTTTT 120

Query: 121 TSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDD 180
           T+    +TF  NNYAFP V+E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E +
Sbjct: 121 TA----KTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAE 173

Query: 181 DD 183
           DD
Sbjct: 181 DD 173

[Close]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 30  SKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSI 89
           S ++     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSI
Sbjct: 31  SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI 90

Query: 90  IALTGKDIASAS 102
           IA TG     AS
Sbjct: 91  IAATGTGTTPAS 102

[Close]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-19
Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 22  SNSPNSSESKLIPSK-APKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEW 81
           ++ PNS   K  P + + KDRH KV GR RRIR+P +CAARVFQLTRELG+K+DG+T+EW
Sbjct: 35  TSEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEW 94

Query: 82  LLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLSTTTS 123
           LL++AEP++IA TG           G  P + TS N+S  +S
Sbjct: 95  LLQQAEPAVIAATG----------TGTIPANFTSLNISLRSS 126

[Close]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 23  NSPNSSESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWL 82
           N  + ++++L P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++WL
Sbjct: 62  NKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWL 121

Query: 83  LKKAEPSIIALTGKDIASAS 102
           L++AEPSIIA TG     AS
Sbjct: 122 LQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 27  SSESKLI------PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEW 86
           SSE K +        +  KDRH KV GR RRIR+P LCAARVFQLTRELG+KTDG+T+EW
Sbjct: 135 SSEKKAVVAAGAGAKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEW 194

Query: 87  LLKKAEPSIIALTG 95
           LL++AEP+I+A TG
Sbjct: 195 LLQQAEPAIVAATG 208

[Close]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18
Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 3   SKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAP-------KDRHAKVHGRDRRIRLP 62
           S++    ++  + P+   K       ES ++ +K P       KDRH KV GR RRIR+P
Sbjct: 75  SQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMP 134

Query: 63  PLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSS 122
            LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG           G  P + TS 
Sbjct: 135 ALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG----------TGTIPANFTSL 191

[Close]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL
Match: A0A5A7T0X8 (Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00200 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.0e-84
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVKK TSNSPRNAPK NSP +SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGC-KPFDPTSSNL-S 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA+LDLPGC KPFDP+SSN+ S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTS FEEET G NNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 DDD 182
            +D
Sbjct: 181 TED 183

[Close]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL
Match: A0A1S3CNQ2 (transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.0e-84
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVKK TSNSPRNAPK NSP +SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGC-KPFDPTSSNL-S 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA+LDLPGC KPFDP+SSN+ S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTS FEEET G NNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 DDD 182
            +D
Sbjct: 181 TED 183

[Close]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL
Match: A0A0A0KDC7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 165/184 (89.67%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSK+MRVK+ TSNSPRNAPK NSP +SESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGC-KPFDPTSSNL-S 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA+LDLPGC KP DP+SSN  S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTS FEEET G NNYAFP+VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 DDDD 183
            +DD
Sbjct: 181 TEDD 184

[Close]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL
Match: A0A6J1CGC4 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 153/184 (83.15%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPK--SNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVKKATS+SPRNAPK  SNSPN+SESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLS 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA+L+L  C P  P+SSNLS
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP-SPSSSNLS 120

Query: 121 TTTSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
            TTSCF++ET   NNY FP+ N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN EQ+
Sbjct: 121 ATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLEQD 178

Query: 181 DDDD 183
           D  D
Sbjct: 181 DGQD 178

[Close]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL
Match: A0A6J1K5P6 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.2e-69
Identity = 145/182 (79.67%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MGSKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVKKATSNSPR       PN+SESK IPSKA KDRHAKV GRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKATSNSPRGV-----PNASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLSTT 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASA+ +L GCKP DP+SS  +TT
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGCKPTDPSSSTTTTT 120

Query: 121 TSCFEEETFGVNNYAFPIVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQEDD 180
           T+    +TF  NNYAFP V+E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E +
Sbjct: 121 TA----KTFDGNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSEREAE 173

Query: 181 DD 183
           DD
Sbjct: 181 DD 173

[Close]

BLAST of CcUC02G039000 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-21
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 30  SKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSI 89
           S ++     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSI
Sbjct: 31  SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI 90

Query: 90  IALTGKDIASAS 102
           IA TG     AS
Sbjct: 91  IAATGTGTTPAS 102

[Close]

BLAST of CcUC02G039000 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 22  SNSPNSSESKLIPSK-APKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEW 81
           ++ PNS   K  P + + KDRH KV GR RRIR+P +CAARVFQLTRELG+K+DG+T+EW
Sbjct: 35  TSEPNSEPKKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEW 94

Query: 82  LLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSSNLSTTTS 123
           LL++AEP++IA TG           G  P + TS N+S  +S
Sbjct: 95  LLQQAEPAVIAATG----------TGTIPANFTSLNISLRSS 126

[Close]

BLAST of CcUC02G039000 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 23  NSPNSSESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWL 82
           N  + ++++L P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++WL
Sbjct: 62  NKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWL 121

Query: 83  LKKAEPSIIALTGKDIASAS 102
           L++AEPSIIA TG     AS
Sbjct: 122 LQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of CcUC02G039000 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 3   SKNMRVKKATSNSPRNAPKSNSPNSSESKLIPSKAP-------KDRHAKVHGRDRRIRLP 62
           S++    ++  + P+   K       ES ++ +K P       KDRH KV GR RRIR+P
Sbjct: 75  SQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMP 134

Query: 63  PLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASASLDLPGCKPFDPTSS 122
            LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG           G  P + TS 
Sbjct: 135 ALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG----------TGTIPANFTSL 191

[Close]

BLAST of CcUC02G039000 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 22  SNSPNSSESKLIPSKAP-----KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQ 81
           + +PNS+ + +  +K P     KDRH KV GR RRIR+P +CAARVFQLTREL +K+DG+
Sbjct: 34  TTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGE 93

Query: 82  TVEWLLKKAEPSIIALTGKDIASASL 103
           T+EWLL++AEP+IIA TG     A++
Sbjct: 94  TIEWLLQQAEPAIIAATGTGTIPANI 119

The following BLAST results are available for this feature:

BLAST of CcUC02G039000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900506.1	7.3e-84	90.71	transcription factor TCP16-like [Benincasa hispida]	[more]
XP_008465370.1	1.2e-83	91.26	PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription ...	[more]
XP_004145813.1	3.1e-82	89.67	transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa...	[more]
XP_022140679.1	3.4e-73	83.15	transcription factor TCP15-like [Momordica charantia]	[more]
XP_022996075.1	8.7e-69	79.67	transcription factor TCP14-like [Cucurbita maxima]	[more]

BLAST of CcUC02G039000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	1.3e-19	65.28	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9C9L2	2.3e-19	51.96	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q9LSD5	2.9e-19	58.75	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q53PH2	5.0e-19	63.51	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
Q93Z00	1.5e-18	44.88	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of CcUC02G039000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0X8	6.0e-84	91.26	Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNQ2	6.0e-84	91.26	transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1	[more]
A0A0A0KDC7	1.5e-82	89.67	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV...	[more]
A0A6J1CGC4	1.6e-73	83.15	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 P...	[more]
A0A6J1K5P6	4.2e-69	79.67	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4...	[more]

BLAST of CcUC02G039000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	9.4e-21	65.28	TCP family transcription factor	[more]
AT1G69690.1	1.6e-20	51.96	TCP family transcription factor	[more]
AT3G27010.1	2.1e-20	58.75	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT3G47620.1	1.0e-19	44.88	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G35560.1	1.4e-19	54.65	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 38..122 e-value: 3.0E-26 score: 92.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 38..92 score: 25.429598
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR31072:SF123	TRANSCRIPTION FACTOR PCF1-LIKE	coord: 14..181
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 14..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G039000.1	CcUC02G039000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding