CcUC02G038320 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G038320
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	WUSCHEL-related homeobox 3
Location	CicolChr02: 33695998 .. 33697739 (-)
RNA-Seq Expression	CcUC02G038320
Synteny	CcUC02G038320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAACAAAAAGGAAAAAGAAAAAAAAAAATTATGTCCCCAGCAGCAGGTATTACTACTCCTTCAAGATGGTGTCCAACTCCAGAACAAGTCATGATTTTGGAGGAAATTTACAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAGCATATTACTTCTCATCTTTCTTTGTATGGTAAAATTGAAGGTAAAAATGTGTTCTATTGGTTTCAAAATCACAAGGCTAGAGATCGCCAAAAGCTGAGAAGGAAGCTCTATAAACAGCTTCAGCAACATCATTTTCTTATGAAACGTCACCGTTTTGATGAGCATAATCAGTTCTTTCAGTACTTCCTTCCCCAGCACCATCAGCTTGTACCTCAACTACTCCCGCTTCCATCTCCCTCTTCTCATCAGGTACTTCTCTTTCTATATTACCATAACACTGGTTTTTTCTTTGACTTTTTGCCAGCTATGTTCAAACCCACAAATTATTATGCGGTTAAATATAGGGATACAAAATTTAAACAAAAATACTTGAGTCCATTTTAGGTTGCATCCAGCTTTGTGCAATCTAGCTAAGTGTCTAATCATAAATTGTCACGAGACACTTTTTTTTTTTATTTTCTAAAAAAAATATATATTTTTTTTTCGAAAAGATTCATTGTGATTGAAAGGAATACATAGAGATGACTACATTCATTATTTTTTAAATTTAAATTGGTTGAAAATATATTAAAATATAACAAAATATTGCTGTCTATGGGTGATAGACAACATGCTATCTTGTTATATTTATAAATAGTTTGGCTCAATTTGCTATATTTGTAAATATTTTGATTTTTTTTACTATATTTAAAAATAACCATAAATTAATCTAATTATTTTAATCTAATGATGATAGAAAATCTGAACTTTCTATCTTAAGAGGAAAATTACCTTTTAATTATGATGGAGCTATATGCTCATTTTGGTAATCGGGTGGAGTAAAATTTTTTGCCACAACAGAATACTAACATGTAACCGTTTTTTTGGGCTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTGTAGAAAATTCAAAATTTTAATAAGAATATATACATATTTATTGCATGGTATATATATATATATATATATATTTTACAACTATGTTGGCTATTTATGTGAATAATGCTATTTTAATATTAAGTTGAGTGTAGTGAATTAACGAGATTTTGTTTATGCAGAGGGAGGGTGAAGAGGAGGCGGCGACGGAGGTGGAGGGTGGTGGGAGGACGTGGTTGGGCGGCGATGAGGGAAGGACGGTGGCGGAGGAAGATGGAGAGACGACATGTCGTACGGGGACTTTGAGGACGTTGGAGCTGTTTCCAGTGAGAGCGAGTTGGGTGGAGGAGGAAGAAGGCACGAGTGGAAACGGTGGATGCGGGAATTAATGAAAATTAAAAAGAAAAAAAAAAGGGAAATTTGAAGGGAAAGTATAGGGTACGGCGTGGCGTAGGGTAAGTCAGTGCGTAGGGTTTAAAATTAGGTGTCATAATTAATATTGTAAAAATTGGAA

mRNA sequence

AAACAAACAAAAAGGAAAAAGAAAAAAAAAAATTATGTCCCCAGCAGCAGGTATTACTACTCCTTCAAGATGGTGTCCAACTCCAGAACAAGTCATGATTTTGGAGGAAATTTACAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAGCATATTACTTCTCATCTTTCTTTGTATGGTAAAATTGAAGGTAAAAATGTGTTCTATTGGTTTCAAAATCACAAGGCTAGAGATCGCCAAAAGCTGAGAAGGAAGCTCTATAAACAGCTTCAGCAACATCATTTTCTTATGAAACGTCACCGTTTTGATGAGCATAATCAGTTCTTTCAGTACTTCCTTCCCCAGCACCATCAGCTTGTACCTCAACTACTCCCGCTTCCATCTCCCTCTTCTCATCAGAGGGAGGGTGAAGAGGAGGCGGCGACGGAGGTGGAGGGTGGTGGGAGGACGTGGTTGGGCGGCGATGAGGGAAGGACGGTGGCGGAGGAAGATGGAGAGACGACATGTCGTACGGGGACTTTGAGGACGTTGGAGCTGTTTCCAGTGAGAGCGAGTTGGGTGGAGGAGGAAGAAGGCACGAGTGGAAACGGTGGATGCGGGAATTAATGAAAATTAAAAAGAAAAAAAAAAGGGAAATTTGAAGGGAAAGTATAGGGTACGGCGTGGCGTAGGGTAAGTCAGTGCGTAGGGTTTAAAATTAGGTGTCATAATTAATATTGTAAAAATTGGAA

Coding sequence (CDS)

ATGTCCCCAGCAGCAGGTATTACTACTCCTTCAAGATGGTGTCCAACTCCAGAACAAGTCATGATTTTGGAGGAAATTTACAGAAATGGGCTTAAAACTCCTAATGCCACTCAAATTCAGCATATTACTTCTCATCTTTCTTTGTATGGTAAAATTGAAGGTAAAAATGTGTTCTATTGGTTTCAAAATCACAAGGCTAGAGATCGCCAAAAGCTGAGAAGGAAGCTCTATAAACAGCTTCAGCAACATCATTTTCTTATGAAACGTCACCGTTTTGATGAGCATAATCAGTTCTTTCAGTACTTCCTTCCCCAGCACCATCAGCTTGTACCTCAACTACTCCCGCTTCCATCTCCCTCTTCTCATCAGAGGGAGGGTGAAGAGGAGGCGGCGACGGAGGTGGAGGGTGGTGGGAGGACGTGGTTGGGCGGCGATGAGGGAAGGACGGTGGCGGAGGAAGATGGAGAGACGACATGTCGTACGGGGACTTTGAGGACGTTGGAGCTGTTTCCAGTGAGAGCGAGTTGGGTGGAGGAGGAAGAAGGCACGAGTGGAAACGGTGGATGCGGGAATTAA

Protein sequence

MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPSSHQREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRASWVEEEEGTSGNGGCGN

Homology

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BLAST of CcUC02G038320 vs. NCBI nr
Match: XP_038902731.1 (WUSCHEL-related homeobox 3-like [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86
Identity = 167/191 (87.43%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP+    TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFYW
Sbjct: 1   MSPSG--ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPS 120
           FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEH QFF YFLPQH   VPQLLP PSP 
Sbjct: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHTQFFHYFLPQH---VPQLLPFPSP- 120

Query: 121 SHQREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRASWVEEE 180
           SHQ+EGEEE ATEVEGG  TW GGDEG TVAEEDGETTCR GTLRTLELFPVRASW++EE
Sbjct: 121 SHQKEGEEEPATEVEGGRTTWFGGDEGTTVAEEDGETTCRNGTLRTLELFPVRASWMKEE 180

Query: 181 EGTSGNGGCGN 192
           EGTSGNGG  N
Sbjct: 181 EGTSGNGGWMN 185

[Close]

BLAST of CcUC02G038320 vs. NCBI nr
Match: XP_004148244.1 (WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Csa_022936 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 167/198 (84.34%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP++   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFYW
Sbjct: 1   MSPSS--ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFD----EHNQFFQYFLPQHHQLVPQLLP- 120
           FQNHKARDRQKLRRKLYKQLQQHHF MKR RFD    +H+ FFQYFLP H   VPQLLP 
Sbjct: 61  FQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHH---VPQLLPQ 120

Query: 121 LPSPSSHQRE-GEEEAATEVE-GGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVR 180
           LPSPSS QRE GEEEAATEVE GGGR W+GGDEG TV EEDGETTC  GTLRTLELFPVR
Sbjct: 121 LPSPSSLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVR 180

Query: 181 ASWVEEEEGTSGNGGCGN 192
           ASWV+EEEGTSGNGG GN
Sbjct: 181 ASWVKEEEGTSGNGGWGN 193

[Close]

BLAST of CcUC02G038320 vs. NCBI nr
Match: XP_008463857.1 (PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 166/197 (84.26%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP++   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFYW
Sbjct: 1   MSPSS--ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFD---EHNQFFQYFLPQHHQLVPQLLP-L 120
           FQNHKARDRQKLRRKLYKQLQQHHF MKR RFD   +H+ FFQYFLP H   VPQLLP L
Sbjct: 61  FQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHH---VPQLLPQL 120

Query: 121 PSPSSHQRE-GEEEAATEVE-GGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRA 180
           PSPSS QRE GEEEAATEVE GGGR WLGGD+G TVAEEDGETTC  G+LRTLELFPVR 
Sbjct: 121 PSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRG 180

Query: 181 SWVEEEEGTSGNGGCGN 192
           SWV+EEEGTSGNGG GN
Sbjct: 181 SWVKEEEGTSGNGGWGN 192

[Close]

BLAST of CcUC02G038320 vs. NCBI nr
Match: XP_022944088.1 (putative WUSCHEL-related homeobox 2 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 146/193 (75.65%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MSP--AAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60
           MSP  AA   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPS 120
           YWFQNHKARDRQKLRRKLYKQLQQHHF +KR RFD+H+ FF  FL  H + +P LLPL  
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHH-FFHCFLQHHQRFLPPLLPL-- 120

Query: 121 PSSHQREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRASWVE 180
           P+  Q EG E   TEVEG      GGD+G  V EED ETTC  GTLRTLELFPVRA WV+
Sbjct: 121 PTHFQGEGGEGRTTEVEG------GGDDGMAVGEEDAETTCGNGTLRTLELFPVRAGWVK 180

Query: 181 EEEGTSGNGGCGN 192
           EEEG SGNGG GN
Sbjct: 181 EEEGGSGNGGWGN 184

[Close]

BLAST of CcUC02G038320 vs. NCBI nr
Match: KAG6570743.1 (WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68
Identity = 148/197 (75.13%), Postives = 154/197 (78.17%), Query Frame = 0


Query: 1   MSP-AAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY 60
           MSP AA   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY
Sbjct: 1   MSPAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY 60

Query: 61  WFQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQ-----HHQLVPQLL 120
           WFQNHKARDRQKLRRKLYKQLQQHHF +KR RFD+H+ FF  FL Q     HHQ  P  L
Sbjct: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHH-FFHCFLQQQQHHHHHQRFPPPL 120

Query: 121 PLPSPSSHQREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRA 180
            LP P+  Q EG     TEVEG      GGD+G  V EED ETTCR GTLRTLELFPVRA
Sbjct: 121 -LPLPTHFQGEGR---TTEVEG------GGDDGMAVGEEDAETTCRNGTLRTLELFPVRA 180

Query: 181 SWVEEEEGTSGNGGCGN 192
            WV+EEEG SGNGG GN
Sbjct: 181 GWVKEEEGGSGNGGWGN 186

[Close]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 70/118 (59.32%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 4   AAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQN 63
           AA + + +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQN
Sbjct: 19  AAAVGSTTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQN 78

Query: 64  HKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPSS 122
           HKARDRQKLRR+L      HH L   H +  H       +P      PQLLP   PSS
Sbjct: 79  HKARDRQKLRRRL---CISHHLLSCAHYYHHHLAAAAAVVPP-----PQLLPPLHPSS 128

[Close]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.6e-28
Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 4   AAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQN 63
           AA + + +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQN
Sbjct: 19  AAAVGSTTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQN 78

Query: 64  HKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPSS 122
           HKARDRQKLRR+L      HH L   H +  H       +P   +L+  L P  S SS
Sbjct: 79  HKARDRQKLRRRL---CISHHLLSCAHYYHHHLAAAAAVVPT-TKLLTTLNPSSSSSS 132

[Close]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.6e-28
Identity = 78/163 (47.85%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP A     +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+ YG+IEGKNVFYW
Sbjct: 1   MSPVAS----TRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQL-QQHHFL-------------------MKRHRFDEHNQFFQ 120
           FQNHKARDRQKLR+KL KQL QQ H L                   + ++  D HN +  
Sbjct: 61  FQNHKARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHH 120

Query: 121 YFLPQHH-------QLVPQLLPLPSPS--SHQREGEEEAATEV 135
           +    HH        +       PSP    HQ  G  EA ++V
Sbjct: 121 HHHNHHHNHHRPYDHMSFDCCSHPSPMCLPHQGTGVGEAPSKV 159

[Close]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot
Match: A2ZH47 (WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica OX=39946 GN=WOX3 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-25
Identity = 75/193 (38.86%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 8   TTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKAR 67
           T  +RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL+ YG+IEGKNVFYWFQNHKAR
Sbjct: 4   TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 68  DRQKLRRKLYKQLQQ------------------------HHFLMKRHRFDEHNQFFQYFL 127
           +RQ+LRR+L  + QQ                        H  +M+ H    H        
Sbjct: 64  ERQRLRRRLCARHQQQPSPPSSTVPPAPTAAAAGAVVQVHPAVMQLHHHHHH-------- 123

Query: 128 PQHHQLVPQLLPLPSPSSH-QREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTG 176
             HH   P      + S H Q++ +++A         +        T A+      CR  
Sbjct: 124 --HH---PYAAAAAAQSHHLQQQQQQQAEWPAAVDYCSTASASASATAADMAIPPCCR-- 181

[Close]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot
Match: Q33DK1 (WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-25
Identity = 75/193 (38.86%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 8   TTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKAR 67
           T  +RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL+ YG+IEGKNVFYWFQNHKAR
Sbjct: 4   TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 68  DRQKLRRKLYKQLQQ------------------------HHFLMKRHRFDEHNQFFQYFL 127
           +RQ+LRR+L  + QQ                        H  +M+ H    H        
Sbjct: 64  ERQRLRRRLCARHQQQPSPPSSTVPPAPTAAAAGAVVQVHPAVMQLHHHHHH-------- 123

Query: 128 PQHHQLVPQLLPLPSPSSH-QREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTG 176
             HH   P      + S H Q++ +++A         +        T A+      CR  
Sbjct: 124 --HH---PYAAAAAAQSHHLQQQQQQQAEWPAAVDYCSTASASASATAADMAIPPCCR-- 181

[Close]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL
Match: A0A0A0KHT6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.7e-82
Identity = 167/198 (84.34%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP++   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFYW
Sbjct: 1   MSPSS--ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFD----EHNQFFQYFLPQHHQLVPQLLP- 120
           FQNHKARDRQKLRRKLYKQLQQHHF MKR RFD    +H+ FFQYFLP H   VPQLLP 
Sbjct: 61  FQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHH---VPQLLPQ 120

Query: 121 LPSPSSHQRE-GEEEAATEVE-GGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVR 180
           LPSPSS QRE GEEEAATEVE GGGR W+GGDEG TV EEDGETTC  GTLRTLELFPVR
Sbjct: 121 LPSPSSLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVR 180

Query: 181 ASWVEEEEGTSGNGGCGN 192
           ASWV+EEEGTSGNGG GN
Sbjct: 181 ASWVKEEEGTSGNGGWGN 193

[Close]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL
Match: A0A1S3CK69 (WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 166/197 (84.26%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP++   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFYW
Sbjct: 1   MSPSS--ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFD---EHNQFFQYFLPQHHQLVPQLLP-L 120
           FQNHKARDRQKLRRKLYKQLQQHHF MKR RFD   +H+ FFQYFLP H   VPQLLP L
Sbjct: 61  FQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDHDHHHFFQYFLPHH---VPQLLPQL 120

Query: 121 PSPSSHQRE-GEEEAATEVE-GGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRA 180
           PSPSS QRE GEEEAATEVE GGGR WLGGD+G TVAEEDGETTC  G+LRTLELFPVR 
Sbjct: 121 PSPSSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRG 180

Query: 181 SWVEEEEGTSGNGGCGN 192
           SWV+EEEGTSGNGG GN
Sbjct: 181 SWVKEEEGTSGNGGWGN 192

[Close]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL
Match: A0A6J1FXP0 (putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC111448632 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 146/193 (75.65%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MSP--AAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60
           MSP  AA   TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPS 120
           YWFQNHKARDRQKLRRKLYKQLQQHHF +KR RFD+H+ FF  FL  H + +P LLPL  
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHH-FFHCFLQHHQRFLPPLLPL-- 120

Query: 121 PSSHQREGEEEAATEVEGGGRTWLGGDEGRTVAEEDGETTCRTGTLRTLELFPVRASWVE 180
           P+  Q EG E   TEVEG      GGD+G  V EED ETTC  GTLRTLELFPVRA WV+
Sbjct: 121 PTHFQGEGGEGRTTEVEG------GGDDGMAVGEEDAETTCGNGTLRTLELFPVRAGWVK 180

Query: 181 EEEGTSGNGGCGN 192
           EEEG SGNGG GN
Sbjct: 181 EEEGGSGNGGWGN 184

[Close]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL
Match: A0A7J7DE76 (WUSCHEL-related homeobox 3 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00237 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.3e-33
Identity = 101/211 (47.87%), Postives = 119/211 (56.40%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSPA      SRWCPTPEQ+MILEE+YR G++TPNA+QIQHIT+ LS YGKIEGKNVFYW
Sbjct: 1   MSPAGS----SRWCPTPEQLMILEELYRTGIRTPNASQIQHITAQLSFYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPS 120
           FQNHKARDRQKLRRK+ KQLQQ       H+  +++    YF P       QL    SPS
Sbjct: 61  FQNHKARDRQKLRRKINKQLQQQQLYNHHHQLQQNH--LHYFEPPAACAFHQLSQHNSPS 120

Query: 121 SHQREGE-EEAATEVEGGGRTW-LGGDEGRTVAEE------------------------- 180
               EG  E+AA        TW LG  E R  AE+                         
Sbjct: 121 FLPHEGGLEDAAGASRATNYTWKLGIPETRETAEKSMMMYEHDWMMLMNVSPLPIQCSTT 180

Query: 181 DGETTCRTGTLRTLELFPVRASWVEEEEGTS 185
           +  T   T  L+TLELFPV A+ ++EE   S
Sbjct: 181 NTTTPTTTRPLKTLELFPVTATCLKEESDKS 205

[Close]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL
Match: A0A067LAA9 (Homeobox domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_05620 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32
Identity = 75/123 (60.98%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP++  ++ SRWCPTPEQ+MILEE+YRNG++TPNA+QIQ IT+HLSLYGKIEGKNVFYW
Sbjct: 1   MSPSSTTSSSSRWCPTPEQLMILEELYRNGIRTPNASQIQRITAHLSLYGKIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQLQ--QHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPS 120
           FQNHKARDRQKLRRKL KQLQ  Q       H    H     Y    HH L+      P 
Sbjct: 61  FQNHKARDRQKLRRKLIKQLQQPQQQLFYPYHDHQLHQNMSNYHHHHHHHLLGSFFDSPP 120

Query: 121 PSS 122
           P++
Sbjct: 121 PTA 123

[Close]

BLAST of CcUC02G038320 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-29
Identity = 78/163 (47.85%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 1   MSPAAGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYW 60
           MSP A     +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+ YG+IEGKNVFYW
Sbjct: 1   MSPVAS----TRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYW 60

Query: 61  FQNHKARDRQKLRRKLYKQL-QQHHFL-------------------MKRHRFDEHNQFFQ 120
           FQNHKARDRQKLR+KL KQL QQ H L                   + ++  D HN +  
Sbjct: 61  FQNHKARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHH 120

Query: 121 YFLPQHH-------QLVPQLLPLPSPS--SHQREGEEEAATEV 135
           +    HH        +       PSP    HQ  G  EA ++V
Sbjct: 121 HHHNHHHNHHRPYDHMSFDCCSHPSPMCLPHQGTGVGEAPSKV 159

[Close]

BLAST of CcUC02G038320 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 99.4 bits (246), Expect = 3.4e-21
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 11  SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQ 70
           +RW PT EQ+ ILE +Y+ G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 89  TRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148

Query: 71  KLRR 75
           K +R
Sbjct: 149 KQKR 152

[Close]

BLAST of CcUC02G038320 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 7   ITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKA 66
           +   SRW PTP+Q+ +LEE+YR G +TP+A  IQ IT+ L  YGKIEGKNVFYWFQNHKA
Sbjct: 71  VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130

Query: 67  RDRQKLRRKL----YKQLQQHHFLMKRHRFDEHNQFFQYFLPQHHQLVPQLLPLPSPSSH 126
           R+RQK RR++     + +     L+  H FD+ +    Y + Q    +  +     P   
Sbjct: 131 RERQKRRRQMETGHEETVLSTASLVSNHGFDKKDP-PGYKVEQVKNWICSVGCDTQPEKP 190

Query: 127 QREG--EEEAATEVEGGGRTWLGGDEGRT 150
            R+   EE A   VE   R   GGDE R+
Sbjct: 191 SRDYHLEEPANIRVEHNAR--CGGDERRS 216

[Close]

BLAST of CcUC02G038320 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-19
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 8  TTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKAR 67
          T   RW PT EQ+ IL +++R GL+TP   QIQ I++ LS YGKIE KNVFYWFQNHKAR
Sbjct: 20 TKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKAR 79

Query: 68 DRQKLRRKLYKQLQQHH 85
          +RQK RRK+      HH
Sbjct: 80 ERQK-RRKISIDFDHHH 95

[Close]

BLAST of CcUC02G038320 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-19
Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 5  AGITTPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNH 64
          AG  + SRW PT +Q+ +LE +Y+ G++TP+A QIQ IT  L  YG IEGKNVFYWFQNH
Sbjct: 7  AGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNH 66

Query: 65 KARDRQKLRRKLYKQLQQHHFLMKRHRF 93
          KAR RQK  +K  +    +  L K  RF
Sbjct: 67 KARQRQK--QKQERMAYFNRLLHKTSRF 92

The following BLAST results are available for this feature:

BLAST of CcUC02G038320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902731.1	2.2e-86	87.43	WUSCHEL-related homeobox 3-like [Benincasa hispida]	[more]
XP_004148244.1	1.6e-81	84.34	WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Cs...	[more]
XP_008463857.1	3.6e-81	84.26	PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]	[more]
XP_022944088.1	6.3e-70	75.65	putative WUSCHEL-related homeobox 2 [Cucurbita moschata]	[more]
KAG6570743.1	4.5e-68	75.13	WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC02G038320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5W7C3	1.1e-29	59.32	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
A2XZR3	3.6e-28	57.63	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]
Q9SIB4	3.6e-28	47.85	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
A2ZH47	8.4e-25	38.86	WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica OX=39946 GN=WOX3 PE=3 S...	[more]
Q33DK1	8.4e-25	38.86	WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX3 PE=1...	[more]

BLAST of CcUC02G038320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHT6	7.7e-82	84.34	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE...	[more]
A0A1S3CK69	1.7e-81	84.26	WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1	[more]
A0A6J1FXP0	3.1e-70	75.65	putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC11144863...	[more]
A0A7J7DE76	2.3e-33	47.87	WUSCHEL-related homeobox 3 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G002...	[more]
A0A067LAA9	2.5e-32	60.98	Homeobox domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_05620 PE...	[more]

BLAST of CcUC02G038320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28610.1	2.6e-29	47.85	Homeodomain-like superfamily protein	[more]
AT1G46480.1	3.4e-21	68.75	WUSCHEL related homeobox 4	[more]
AT3G18010.1	3.2e-19	42.95	WUSCHEL related homeobox 1	[more]
AT3G11260.1	4.1e-19	59.74	WUSCHEL related homeobox 5	[more]
AT5G59340.1	4.1e-19	53.41	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 8..75 e-value: 9.7E-6 score: 35.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 11..70 e-value: 2.1E-17 score: 62.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 16..71 score: 9.604237
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 12..71 e-value: 1.25031E-4 score: 36.8377
None	No IPR available	GENE3D	1.10.10.60		coord: 10..83 e-value: 4.8E-9 score: 37.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..158
None	No IPR available	PANTHER	PTHR45940:SF24	WUSCHEL-RELATED HOMEOBOX 3	coord: 9..124
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 9..124
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G038320.1	CcUC02G038320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity