CcUC02G038230 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGACCTTCCTCTTCCCTTTCTCTCAACCGCCTTCTGATCGGATCCTTTCTTATTCCTCACGCGCCGCCGTCCCTCTCATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGTCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAAATAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTTCCCGCCGGCGATTTTCAGGTGAGGCTTATAAAAATTATTATTTAAAAAATATGTGAGAAAAAAAATTAATCAATGTGACTATTATTCTCACCACAAAAGAATTATTTGATGAAATAAATACGATGGAGTGGAACTAAAATTCATAGTTTCGTTAGCGATTGCAAAGATAACTATCAAACTCAAAATATTAGTCAGGGAAACAAAATTTAGATCCAACTCCCAAAGTATATTAGTAAACAAGAAGTTTATCATTTTAAAAATAAAATTTGCTATATTTGTAATTTTTTAGAAATATTGTTATACACTTAATTATTAAGTACCATTCGTTACAATTATCTATGGAACATTCGAAGAAAAGTAATTACAATGTGATCATATTGAATAAATTTCCATTCAATACAGATTTAAATTCATTGCACTCTACCAAAAGGGCAGTCACAATAAATGTAACAATCAAATCAAATATATCTTTTTTTTTCTCTTTTGTGTATAATTAAGTTAAAAATATTTCTGTATTTCAGTCTCTTGAATAATTTATCCAATTAATGGAAGGTACTTACAATCATGGTCAATTTCCATGGGAAGGATCATTAAAAAAAATTGGCTTTTCATGAATCCAAAGAGTTTGTTTTATTATTCTTTTATTGAAGAGGGTCTTGGGTATAATATTTAAATGAAAATGGGATTAAAAGGAGCATGTAAGATAATATTATATAAAGTGGATTTTGAATATTTATTAATGACTTTGGAAAATGGTGAATGGCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGTATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTTCATTTTTTCTTTTTCTTTTTGAATTTCTTTCTTATATTCTTCTTTATCTATCCTACTTGAAATTATAATGGATTAATTCTGTAGAATAAATAATTTCACCTCTTATTCTACCTACACATTATTTCATAGATTCTAGATGCCAACAACTATCAAGTAATGTTGTTGTATTTTTATATTATTGTCATCATATAACTTCTCAATTATGANCCAAAATATTAGTCAGGGAAACAAAATTTAGATCCAACTCCCAAAGTATATTAGTAAACAAGAAGTTTATCATTTTAAAAATAAAATTTGCTATATTTGTAATTTTTTAGAAATATTGTTATACACTTAATTATTAAGTACCATTCGTTACAATTATCTATCGAACATTCGAAGAAAAGTAATTACAATGTGATCATATTGAATAAATTTCCATTCAATACAGATTTAAATTCATTGCACTCTACCAAAAGGGCAGTCACAATAAATGTAACAATCAAATCAAATATATCTTTTTTTTTCTCTTTTGTGTATAATTAAGTTAAAAATATTTCTGTATTTCAGTCTCTTGAATAATTTATCCAATTAATGGAAGGTACTTACAATCATGGTCAATTTCCATGGGAAGGATCATTAAAAAAAATTGGCTTTTCATGAATCCAAAGAGTTTGTTTTATTATTCTTTTATTGAAGAGGGTCTTGGGTATAATATTTAAATGAAAATGGGATTAAAAGGAGCATGTAAGATAATATTATATAAAGTGGATTTTGAATATTTATTAATGACTTTGGAAAATGGTGAATGGCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGTATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTTCATTTTTTCTTTTTCTTTTTGAATTTCTTTCTTATATTCTTCTTTATCTATCCTACTTGAAATTATAATGGATTAATTCTGTAGAATAAATAATTTCACCTCTTATTCTACCTACACATTATTTCATAGATTCTAGATGCCAACAACTATCAAGTAATGTTGTTGTATTTTTATATTATTGTCATCATATAACTTCTCAATTATGACTTTATAATATATATTTCATGTTTAATTATAAATTTGGTCTCCATAATTTGAAAAAAAAAATTAGAAATATAGTGTTTACTTAGTACTTTTGATTCCATAAAAATAGTTCATATGGATTAGTAAAATTCTTATACATAGTTTTCAATTAAGAGGACTTTATCAAATCCCTAACTTCTAATTTAGGTATAAAATTTGGTTTTAAACTTATAAATTATAATAATTCAAATTATATAACTAATTTATTATGTAGTTGTATGTTATTTCAATTTCACCTTCATCTTTTTGCTTGTCACATCTAACTTATGAGAAACTCCAAAGTACTCCTTTTATTCTCTCTCTTTCTCATTTTAAAGGTTGAAAGGTCATTTCAATATTTAAAAGAGGGTCAGAATGGAAAAGACAGATTTTAAAACCATCCCAAAATTTGTCCAAAAGACAATTAAACAACATTAATTTCATTCAATAAAAAATGATAAGACAATCAATCCCCGTCACATCTTCTCATAGATGTGATATTTTTAGGTCCTTCATAATAATATTGCTTGAGATACTATTTAATTCTAATTAAGTAAATGATTTTTTTTTTTTTTTTTTTTTTTGTAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCAAGATACAACGACGACGTAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGAAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGAATCTCACACCATAACAACAACAACTAATAATGTAGTTCCTAGTCTAGTTGCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTGCGTGAGAATGTCATATTTACTTATTTTAGCTTCCTTTCTTTTTTGCCTTCACATGTATGGAAAATTTCAAGTCTATATAAATTATATTTGTAGTAATAATAATGAAGAGAACGTTGTTATTGGGTTGTGAATATGAGGGGGGTTTTAACAAAAATGTTTAAAATACCATTTTGGTCTTTATACTTTATAATTTATTCAATCTCAGTCACCAACTTTCGAATATCCAATTTTGGTTCTTGTACTTTTAGTTAATCTTAAATTTAGTTGTTTGAAGTTAATTTTTATAGAAATTGATTAAATAAAAATAATAATTTTTATGTAAG CGACCTTCCTCTTCCCTTTCTCTCAACCGCCTTCTGATCGGATCCTTTCTTATTCCTCACGCGCCGCCGTCCCTCTCATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGTCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAAATAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTTCCCGCCGGCGATTTTCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGTATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCAAGATACAACGACGACGTAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGAAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGAATCTCACACCATAACAACAACAACTAATAATGTAGTTCCTAGTCTAGTTGCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTGCGTGAGAATGTCATATTTACTTATTTTAGCTTCCTTTCTTTTTTGCCTTCACATGTATGGAAAATTTCAAGTCTATATAAATTATATTTGTAGTAATAATAATGAAGAGAACGTTGTTATTGGGTTGTGAATATGAGGGGGGTTTTAACAAAAATGTTTAAAATACCATTTTGGTCTTTATACTTTATAATTTATTCAATCTCAGTCACCAACTTTCGAATATCCAATTTTGGTTCTTGTACTTTTAGTTAATCTTAAATTTAGTTGTTTGAAGTTAATTTTTATAGAAATTGATTAAATAAAAATAATAATTTTTATGTAAG ATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGTCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATCAAGCTTTGGAACTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGACTTCTCCGCCGCAACCCCTAACAATCCGTCCATCAAATAACAATTTTTCATTACACCAATCTTTCCCCCTCCTTAATCCTTCTCTCCAATCCAATGATTTATTTCTTCAACGCACCTTCTCTTCCTCCTCGCCTCCGCCCTCCACCGCCACCGTCGATACTCTCGTCAACCGCCCGCTCTTTCCCGCCGGCGATTTTCAGAAGAATAATCAAAGAGCAGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTGAAGGTATGAGCAGAGCATGTAGGTACAGCCCAGAAGAGAAGAAGGAAAGAATTGAAAGATATAGAACCAAAAGAAATCAGAGGAACTTCAACAAGAAGATTAAGGTTATACTCACTAATATTATTTGGGTGTGGTTAAAGTATGCTTGTAGGAAGTCATTGGCGGATAGTCGACCACGGATCAGAGGACGATTTGCAAGATACAACGACGACGTAGTGAAGAATTATCCAATGCAATGGAGTGAAGGGCGAGAAGAGGAAGAAGAACAACAAGAAGAAAATAATTGTGGTGATAATTGGATCAAGTATTTCATTGATGCATATTCCACGAACCTTATTCCATGA MAFSPFLSAASHSSVDLAGVDFDWLPDSSIKLWNSEFSDSCGDGSPTSPPQPLTIRPSNNNFSLHQSFPLLNPSLQSNDLFLQRTFSSSSPPPSTATVDTLVNRPLFPAGDFQKNNQRAESPVSCESSITIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKVILTNIIWVWLKYACRKSLADSRPRIRGRFARYNDDVVKNYPMQWSEGREEEEEQQEENNCGDNWIKYFIDAYSTNLIP Homology
BLAST of CcUC02G038230 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]) HSP 1 Score: 413.3 bits (1061), Expect = 1.5e-111 Identity = 214/249 (85.94%), Postives = 220/249 (88.35%), Query Frame = 0
BLAST of CcUC02G038230 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]) HSP 1 Score: 374.0 bits (959), Expect = 9.8e-100 Identity = 200/252 (79.37%), Postives = 213/252 (84.52%), Query Frame = 0
BLAST of CcUC02G038230 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 372.1 bits (954), Expect = 3.7e-99 Identity = 199/253 (78.66%), Postives = 213/253 (84.19%), Query Frame = 0
BLAST of CcUC02G038230 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus]) HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98 Identity = 204/259 (78.76%), Postives = 216/259 (83.40%), Query Frame = 0
BLAST of CcUC02G038230 vs. NCBI nr
Match: XP_022944273.1 (uncharacterized protein LOC111448769 isoform X1 [Cucurbita moschata]) HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94 Identity = 187/251 (74.50%), Postives = 204/251 (81.27%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04 Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04 Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.7e-04 Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.7e-04 Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 8.0e-04 Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 4.7e-100 Identity = 200/252 (79.37%), Postives = 213/252 (84.52%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99 Identity = 199/253 (78.66%), Postives = 213/253 (84.19%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99 Identity = 199/253 (78.66%), Postives = 213/253 (84.19%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98 Identity = 204/259 (78.76%), Postives = 216/259 (83.40%), Query Frame = 0
BLAST of CcUC02G038230 vs. ExPASy TrEMBL
Match: A0A6J1FXW4 (uncharacterized protein LOC111448769 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448769 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 6.0e-95 Identity = 187/251 (74.50%), Postives = 204/251 (81.27%), Query Frame = 0
BLAST of CcUC02G038230 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein ) HSP 1 Score: 102.8 bits (255), Expect = 3.9e-22 Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of CcUC02G038230 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein ) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15 Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 0
BLAST of CcUC02G038230 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein ) HSP 1 Score: 79.7 bits (195), Expect = 3.6e-15 Identity = 73/200 (36.50%), Postives = 102/200 (51.00%), Query Frame = 0
BLAST of CcUC02G038230 vs. TAIR 10
Match: AT5G59990.2 (CCT motif family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of CcUC02G038230 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein ) HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13 Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|