CcUC02G036020 (gene) Watermelon (PI 537277) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGTTTTTATTTTCTGATTTCCTTCCGTTATATTATCTTTTCAATGAATTCATTTCTCCCCCAAGTTACTGAGGGGAGTAGGTTTCTCTCGTTGAATTTCGGTTCTTCTTTGCCTCTGCTTTATGTTTATGGCTTTTGATTTATGTTTAGTTTGATTATTTGGAGATTCCTTCGCCGTTCGGGAAGTTGTTTCTTCGTGCCGTCTCGATTTCTGTTGTGTTTGTTTCCTCGTTTTATCCATGTCTTCGTTGTTGAGGAGATGTTATGGAAACTCTGGTCTTTTTATCAATTCTAATAACATGCGTTTGCTTCGGATTTCGTGTCATTGCATGAGCCAATGGATGACGGATTAAGAAATTGGCGTTAGTGATTTCATTTTTCTTGCTTGTTGGGTTTAGCAGACATGTTAAGTTGGATTGCTGGAGTAAGTTTTCTTTTCAAAATGATATTTAATATGTTTGCGTCTCTTAAGTTTATGCTTGTTCTTTATCGTGTGTTTGTTTATCATATTTTAGCTTCTTCCAACTCGATTTTGTTTTCAGGTGTATTTTTATATTCTTGCCAATTCACTTTATCAAAAAAATTATTTTCCACAGAAACTGTTGTGGCAATTTGATTCCAGCGTGCCTTTTTTTAATAATCATATTTTTAATTTTGGAATGCGCATTTCTTCTAGCTTCAAACAGGGGAGATTAGTGAATTTGGTTTTATTGATTTGTTTTTACGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGTATGCATTTACCTTCTTCTCCAATTACTTCAACTACAATGACCGTGACTTTCTATATCCATTTGATATGTGGTTAACTTGTTTAATCTCCCTCAAATATGTCAATATGCGCTCTCTGTTTAAGAATAGAATTTGGTGTGGAGCTTTCCTACTTTGCAAAGGGTTCGTTAATAGTTATTGGAAAGAAACAATAAAGTTGGTGGATTTTAGAATCCAACATTTTTTTCATACTTGAGTTTTATTTAAAAATGTCCTGACATTACACAAGCGAAGGACTGATCTATTGCTGATTTGAGAAGAGTTTAGTGGATTAAATATCTATTTCCCTTTCCTAAGGTTGAAGGATCCATCTCTTAAAAATAGAAGGCCGGACATGCCTATTAAGTATCTTGTATGTGTGTTGTATTTTGACATGTTTCAATTCGAAGTTTTATACTGAATAGTGAAATGTACACAATACATTTATAATATGACATAAATGAAGATGTAAGATTTATAATACTCAGCTAGGTAATGTCTTTTAATGAAGGTTTATTAAAGAAACCTTGGAGCAATAAGCATATTTTCTAGTTGCTTCAAAAAATTATAGTTTTTCAAAATTGAATTTAATATTAAAATACTAGTTTATTTCAATTTTAAGTTAGCGAATTATGGTAAAAATATCATCCTTTTCAAATTGGCTAAACAAAAGTCTATGAAATTTTATTTCAAAATCTAGTAAAATTAAAACATCAAATTATCAAAACAATAAATAAATAAATAATTAGAAAAAATATTCTTCTAAAATTTTTAGTTTATTTTAAACATAACTATCTTACAATAATTAAGATGACTAATTTAAACTAATCTAAAATCTAACCACTGATTAATACAAGAAAATATTTCACAAACTCAAGATTTATAAATTTGCAATTCATTTCTAGGCTTCCTAAGCTTGCCTTCCAAATACATGCTTCTTAAACCCAGGCTTCCAAAACTTGCACTTCAAACATAGTTTTTTTAAACCCAGGCTACCTAAACCTCCCAGCCTAACCCCGAGGCTTAACATTTCTAGACTTAAGATTCCAAACTTGCATGACAAACACCTTTTTTAAGGATGGGAATTCAAAATAAACATTTCATGTAAAATAGTGTTGAAGCTGTTGATTCAGAATACTGATATAGACTGACAGAGACTTTTGTTAGTTTCACATACTTAGAAAACTAACTCCACGTTTCAACTTCAAGTATCTGAATTCATATAAATGAATGATTTCAGAAGGTCTAATACAGTAATGCTCAAGTGCCTGAAGATCGATAGTTTTATAGAGTTAGACAGCCACGTTACTTAAGTTCAAGTGTCCATGATTTCTAGGCTTTCTCTAGTTGTCTTCCCATGCTCTTTCTTCTAATATCCATTGTCTGCTATTATTTTATGGAGTGGCATTAAATATATCCTACCCACGTAATGACAATTAGTGAGTCAACAATTCTGAATTCCATCAAAATTCTTTCTTATATTTCATGTTGTCGGTCATCTATGAACTCTTACCGGGTTAACGGTATTTGTCATTGCTTTTATGGCACTTGGACTGTGCTTCTTGTAACTTTCCCCGCTTTTTGCAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTGGCCCTGAGGGGTGGTTATCTGTAAATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTGGCCCTGAGGGGTGGTTATCTGTAA ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTGGCCCTGAGGGGTGGTTATCTGTAA MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL Homology
BLAST of CcUC02G036020 vs. NCBI nr
Match: XP_004139900.1 (ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NEDD8-like protein RUB1 [Benincasa hispida] >KAE8646873.1 hypothetical protein Csa_020638 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. NCBI nr
Match: XP_022149770.1 (ubiquitin-NEDD8-like protein RUB1 [Momordica charantia]) HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. NCBI nr
Match: XP_008456305.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa] >TYK08596.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa]) HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. NCBI nr
Match: XP_028067984.1 (ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-NEDD8-like protein RUB2 isoform X1 [Malus domestica] >KAB1216920.1 Ubiquitin-NEDD8-like protein RUB2 [Morella rubra] >KAB2608029.1 polyubiquitin [Pyrus ussuriensis x Pyrus communis] >RXH76481.1 hypothetical protein DVH24_019369 [Malus domestica]) HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. NCBI nr
Match: KAA3464467.1 (ubiquitin-NEDD8-like protein RUB2 isoform X1 [Gossypium australe]) HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77 Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2) HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy Swiss-Prot
Match: P0C073 (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 2.1e-79 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3) HSP 1 Score: 295.0 bits (754), Expect = 4.8e-79 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy Swiss-Prot
Match: Q8RUC6 (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 SV=3) HSP 1 Score: 292.0 bits (746), Expect = 4.0e-78 Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy TrEMBL
Match: A0A6J1D6N8 (ubiquitin-NEDD8-like protein RUB1 OS=Momordica charantia OX=3673 GN=LOC111018120 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.3e-78 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy TrEMBL
Match: A0A5D3CE17 (Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00180 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy TrEMBL
Match: A0A1S3C469 (ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy TrEMBL
Match: A0A498I4U3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. ExPASy TrEMBL
Match: A0A6A1W291 (Ubiquitin-NEDD8-like protein RUB2 OS=Morella rubra OX=262757 GN=CJ030_MR4G016067 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. TAIR 10
Match: AT1G31340.1 (related to ubiquitin 1 ) HSP 1 Score: 295.0 bits (754), Expect = 3.4e-80 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CcUC02G036020 vs. TAIR 10
Match: AT2G35635.1 (ubiquitin 7 ) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-79 Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of CcUC02G036020 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 ) HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of CcUC02G036020 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein ) HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of CcUC02G036020 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 ) HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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