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CcUC02G035860 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAACGTATACTTATTAATTTTATGAAACTAAAGGTTGGGTTGGGTTTAGTTTATTTAATTGTTTTTCTTTTAACGTAAACATTTAGAGGAAAACCGAAAACAATTCGGTTTTTTCATTCTCGAAGCGACAAGAATGGAGAATCGAATTAAACATGATACCGTCTGCCGCACTGCAATCGGAACTCATCTTCAGCACTAAAAAGGTCGCAGCATTTTACAGATTTCATTTCTAAATATCAGAGTAGGAGCTTAAAGGAATACAACCCATGTTTTGTAAGTTTCAACACTTGTACCCTTTTTCCCCACCCTATATTAATCAAGAAACGATTAAAAAGGAAAAGTGATCATCAAATCTCTTTCCGTCACATCTAGTTTTGCGTTAAATTGCTCTTTCATTGAAGATAATTGCTTGGATTTTGTTGGGTCATTTTTATTTTTGATTCCTATGTCTGTTACCCAAAATGGGAAAAGGGATTTAGCTTCCAGGACGTCTCTCGGTGAATTAAGAAATGGGTAATAAATGGAAGATGCAATGAATGAGTTAAGAAGCATTGGAATTATAATGAACAGTTGAGCAACTCTATGAATTGTATTTTCTCTTAATATTTGTTTAAAACATCCTAATGGGTAACTGGGCACTGGCGCTGCAGCAAAACATTGCTCTTAGGATGATTGTGTAACAGTTGAGTTTTTCTGAAATGGGAAATGAAATGACAACATCTGTCTGGGAGAACTGAGTTACAATATACCTGTTTACAACTACAGAGAATGGAAATATGTTCTGTATCTCACTTTAAAATCTTGAATAATGATGCCTATATTTAGGCAAAGTTTAGAAATCAGAACTAAACTTTAATAAAATCAAGTAATTAGAGAACTAGAACAGTTGAGTATGTAACTTAACATCTGGAATGCAATATCATCTTTGATATTCATGTAACTTACTTGAAGATAACGATTGCCTTTCTTATGTAGAGCAGTCAAATGGAGTGTGGTTGAGAATCTGAGATTGTTTATGCAACTGCTTAGATGTTTACGTTGAGAATTTGGATATCTAGCCTAAAGACCATATCACTTGCTTCTTATCTAGCCGATGGACTCGAGAGAAAATAAAGTACCACCTAAAGGTCTTCCATTTTATCCTTATTTGTTACAGCCCACAGTTATTTTAGTTTCCTGAGGATATGAGTAAAAGTAACTCTGCTATTGAACTAATTATTTATGCAGGTGAGATTGCTCAGATTCTAGTTGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTATTCTCTCTTTAATCTGCCTAAGATCCTATTTTCTGCTTTATTTCTGGGGAAGTATGGTGATAGCATGATGTTTTTTTCACTTTATTTCTATCAAATTATTGATAAAGTTGGGTTTTTGGTCTTTACCCCTTCCCAACCGCAGGTAATAAGATATCAGTAGTTGATATTAATGAATTAAAGAAAAGAAGGAAAAGATAGGAATTGGAACTAATTATTGGTGGGGTTTATGTGAAGGTGCTTTTGAAAGAAGGAGGTACACGAATGCGGTTGTGCAGAAAGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCCACTGTTTCAGGGCTACTGCCTTTCGTCCAAAAGGTTGACCATTCACTTGTATTCTTTGTCCTCTATCTGGTGAAGATGGTTCTAAATTTCTTGTCTACCCATGTGCCATTTAGAATTGAAACCAAGTTCTTTTGTCAAGGGCAATTTTGAACAGTGGACTATTTCTTTCACATGGCTACTTCTTGCTAGGTTTTAGGGAAAGTGAGAGTGGTTTCTGATTAGAACCAGTGAAGGGAACTATTGGGTTCTGTGGTTGCAAGTATTAGATGTAAACATTAAATTCGGGGTGCTAGATGTTAAGGCTATAAGCTGGGAATGGTTTGATTATATACTGGTATTCTCATGATATAAGACCTCCTGTTTTTGCAAATGCAAACCCGATTAATGAATCTCGAACCAAGAGAAGTCCATCGAAAACATAAAGTAGGTTTCTAGGCGATGCAGTTGCAATATGACACATTCAACTTGATTTATCTCAGAGAAATAGTAGACTATTTTATGATTATAGAACTTAGATTAATTAACTACTTCTTCCTTAGGGCACATCCAACAGTATCTGGTTGCTGGATTTCAGCCTCACTTTGAGAGTCTGAGCACGAAACATTACTGCTATATTCAGATCGATCTCCTGCTTTTCTTATCCTGTTAGGCAGAGAAAGTTTTGACATTCTTACTACAATATCTGTCAAAGAAACACGCAACTATGAAACTTCATAAACCCAAAGAAAACTAAAGAAATAACAATAATTCTCAAATAATTCTGCGTCCAATTTACTTAGTCTGAACAGGAGTTTCCTCTACAACTAGGGACTGGTGGATAGAGTGGCGGTCATATTTTTCAACGGTGATAATGTCCAACTGGAGAGATTTATTTTCAAGCTCACAGTGAACCAGTCTTATGAATCGAAGGTCGAAAATTCCAACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTTCGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTTATCTTACTAGCTTTTTTCATACTTCAATCCTTAGAAATCTCCATCTGTTCAATTTTGAATAAATATTTCATACAAAATTAAAAGAACTTCTATAAGTTTATCTTCTTATAACAGATTGCAAATGGGAAATAACTGCCTACTTCCAAACACTCCCAAGTTCCGGTACAAGTAAGGATGCAAAGTCATGGATCCCAACAGATACCAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGTCAACCTCTGAGTTTGCAGCTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCTTGTGAATGAATCTGCATTACTGGGTCTGTGAGAATATTTTGCTTAGATTGTTCAAATGAAAAGTTTCTTGAGCTTGTATGTTAGATCTTCTGGAGGCTATCCATAGTGTATATATAAACTCAATACAGCAATTACTCCTTTGAAAGGCTCAAGATGTGTCAAGTTTCAATTTTGCAGCTAAAAGATTCCTTCTTTTTCAGTTTTTTTCAGTCTCTGCTACTATTGAGTTGATATTGTATTTAAAAACAAATCTTGATATCTTATGTAACATGAGGTGAAGTTGTTGTCCAGGTCAGAGATATTGATTTAAGTAATAGATTGGAATATCTATGAAAATTTTGAAGACATATGTCAGAAACCAGAAGGCCTCATGGTTGATAAGGTTGGGTCCATTATTACCCAGAAGTTGGAGATAGATCTGAAAGCAAAAAAGAAAGAGAGAAAAAAAAAAAAAAAAAAAAGGGAAAGGGGTTTTTGTTTGGTAGGTTAATGAGAGACATCATAAGTTGGGGTTTGAGGGTGGATCCCAGGTTGTGAGGCCTGCTACTGTTTCTGTCTTCATTCATGATGGCAATGACAGAACTTCCCACTCTGTTTTCTTTAAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTCTTACTTTTCAGACCATCAACTAGATGCTC GTAACGTATACTTATTAATTTTATGAAACTAAAGGTTGGGTTGGGTTTAGTTTATTTAATTGTTTTTCTTTTAACGTAAACATTTAGAGGAAAACCGAAAACAATTCGGTTTTTTCATTCTCGAAGCGACAAGAATGGAGAATCGAATTAAACATGATACCGTCTGCCGCACTGCAATCGGAACTCATCTTCAGCACTAAAAAGGTCGCAGCATTTTACAGATTTCATTTCTAAATATCAGAGTAGGAGCTTAAAGGAATACAACCCATGTTTTAGCAGTCAAATGGAGTGTGGTTGAGAATCTGAGATTGTTTATGCAACTGCTTAGATGTTTACGTTGAGAATTTGGATATCTAGCCTAAAGACCATATCACTTGCTTCTTATCTAGCCGATGGACTCGAGAGAAAATAAAGTACCACCTAAAGGTGAGATTGCTCAGATTCTAGTTGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTATTCTCTCTTTAATCTGCCTAAGATCCTATTTTCTGCTTTATTTCTGGGGAAGTGCTTTTGAAAGAAGGAGGTACACGAATGCGGTTGTGCAGAAAGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCCACTGTTTCAGGGCTACTGCCTTTCGTCCAAAAGGGACTGGTGGATAGAGTGGCGGTCATATTTTTCAACGGTGATAATGTCCAACTGGAGAGATTTATTTTCAAGCTCACAGTGAACCAGTCTTATGAATCGAAGGTCGAAAATTCCAACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTTCGAACCTCTAACCAAGGTTCTTCCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACACTCCCAAGTTCCGGTACAAGTAAGGATGCAAAGTCATGGATCCCAACAGATACCAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGTCAACCTCTGAGTTTGCAGCTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCTTGTGAATGAATCTGCATTACTGGGTCTGTGAGAATATTTTGCTTAGATTGTTCAAATGAAAAGTTTCTTGAGCTTGTATGTTAGATCTTCTGGAGGCTATCCATAGTGTATATATAAACTCAATACAGCAATTACTCCTTTGAAAGGCTCAAGATGTGTCAAGTTTCAATTTTGCAGCTAAAAGATTCCTTCTTTTTCAGTTTTTTTCAGTCTCTGCTACTATTGAGTTGATATTGTATTTAAAAACAAATCTTGATATCTTATGTAACATGAGGTGAAGTTGTTGTCCAGGTCAGAGATATTGATTTAAGTAATAGATTGGAATATCTATGAAAATTTTGAAGACATATGTCAGAAACCAGAAGGCCTCATGGTTGATAAGGTTGGGTCCATTATTACCCAGAAGTTGGAGATAGATCTGAAAGCAAAAAAGAAAGAGAGAAAAAAAAAAAAAAAAAAAAGGGAAAGGGGTTTTTGTTTGGTAGGTTAATGAGAGACATCATAAGTTGGGGTTTGAGGGTGGATCCCAGGTTGTGAGGCCTGCTACTGTTTCTGTCTTCATTCATGATGGCAATGACAGAACTTCCCACTCTGTTTTCTTTAAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTCTTACTTTTCAGACCATCAACTAGATGCTC ATGGACTCGAGAGAAAATAAAGTACCACCTAAAGGTGAGATTGCTCAGATTCTAGTTGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTATTCTCTCTTTAATCTGCCTAAGATCCTATTTTCTGCTTTATTTCTGGGGAAGTGCTTTTGAAAGAAGGAGGTACACGAATGCGGTTGTGCAGAAAGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCCACTGTTTCAGGGCTACTGCCTTTCGTCCAAAAGGGACTGGTGGATAGAGTGGCGGTCATATTTTTCAACGGTGATAATGTCCAACTGGAGAGATTTATTTTCAAGCTCACAGTGAACCAGTCTTATGAATCGAAGGTCGAAAATTCCAACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTTCGAACCTCTAACCAAGGTTCTTCCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACACTCCCAAGTTCCGGTACAAGTAAGGATGCAAAGTCATGGATCCCAACAGATACCAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGTCAACCTCTGAGTTTGCAGCTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCTTGTGAATGA MDSRENKVPPKGEIAQILVEFLEVAITSIVFLKGIYPSGAILSLICLRSYFLLYFWGSAFERRRYTNAVVQKARHPELQDYIHSTVSGLLPFVQKGLVDRVAVIFFNGDNVQLERFIFKLTVNQSYESKVENSNLEFALRAFLIKLSVFEPLTKVLPPDCKWEITAYFQTLPSSGTSKDAKSWIPTDTKQWQQPPVITPIKSMNSQPLSLQLYLEHPSLSEPKPCE Homology
BLAST of CcUC02G035860 vs. NCBI nr
Match: XP_022947722.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947723.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947724.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947725.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata]) HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104 Identity = 194/226 (85.84%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of CcUC02G035860 vs. NCBI nr
Match: XP_038900295.1 (DNA polymerase zeta processivity subunit [Benincasa hispida] >XP_038900296.1 DNA polymerase zeta processivity subunit [Benincasa hispida]) HSP 1 Score: 384.0 bits (985), Expect = 8.7e-103 Identity = 194/226 (85.84%), Postives = 203/226 (89.82%), Query Frame = 0
BLAST of CcUC02G035860 vs. NCBI nr
Match: XP_022970847.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucurbita maxima] >XP_022970848.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita maxima] >XP_022970849.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita maxima] >XP_022970851.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita maxima]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 190/226 (84.07%), Postives = 205/226 (90.71%), Query Frame = 0
BLAST of CcUC02G035860 vs. NCBI nr
Match: XP_022947726.1 (DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >XP_022947728.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >KAG7034853.1 DNA polymerase zeta processivity subunit [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 372.1 bits (954), Expect = 3.4e-99 Identity = 186/226 (82.30%), Postives = 199/226 (88.05%), Query Frame = 0
BLAST of CcUC02G035860 vs. NCBI nr
Match: XP_023532096.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532097.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532098.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532099.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.5 bits (950), Expect = 1.0e-98 Identity = 185/226 (81.86%), Postives = 199/226 (88.05%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy Swiss-Prot
Match: Q94FL5 (DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.4e-71 Identity = 132/211 (62.56%), Postives = 163/211 (77.25%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy Swiss-Prot
Match: Q8QFR4 (Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis OX=8355 GN=mad2l2 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.2e-19 Identity = 63/209 (30.14%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy Swiss-Prot
Match: Q4KWZ6 (Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MAD2L2 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18 Identity = 62/209 (29.67%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy Swiss-Prot
Match: Q568H3 (Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio OX=7955 GN=mad2l2 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 61/209 (29.19%), Postives = 107/209 (51.20%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy Swiss-Prot
Match: Q28H85 (Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus tropicalis OX=8364 GN=mad2l2 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 63/209 (30.14%), Postives = 106/209 (50.72%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy TrEMBL
Match: A0A6J1G7Q4 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451503 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104 Identity = 194/226 (85.84%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy TrEMBL
Match: A0A6J1I6U9 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469702 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101 Identity = 190/226 (84.07%), Postives = 205/226 (90.71%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy TrEMBL
Match: A0A6J1G790 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451503 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99 Identity = 186/226 (82.30%), Postives = 199/226 (88.05%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy TrEMBL
Match: A0A6J1I0B4 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469702 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.3e-96 Identity = 182/226 (80.53%), Postives = 197/226 (87.17%), Query Frame = 0
BLAST of CcUC02G035860 vs. ExPASy TrEMBL
Match: A0A0A0KEI1 (HORMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139220 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95 Identity = 187/227 (82.38%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of CcUC02G035860 vs. TAIR 10
Match: AT1G16590.1 (DNA-binding HORMA family protein ) HSP 1 Score: 270.0 bits (689), Expect = 1.7e-72 Identity = 132/211 (62.56%), Postives = 163/211 (77.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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