CcUC02G034450 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGGTCTTTTCACTGTTCCCCATCTTCACAAAACAGACAAAACAAACCGGAAATGAAGTAGCTCCATTTTCTCTCTCTCTTTATATATATACCAATCAACAAATGCTTCCCAAAAAAGTTCATTGGATTCACATCTATTTTCTCCAATTCTCTCCAGAAGAAAAAAAAAAAAAATTCATCAAATTAATCAAAACCACAAAGTTTAAATCTTTTCTTGGTTCTCATAGCCATCATTATTGCTCTAAAAGCACAAGCTTTTCTTCATACATTCCAAATGAAGCTCTCTTCAATGGCGGTTCTTCTTCTTTTCCTTATCATGTCTCAAGCTCGAGGTATGTTATACCAATAATTAATTTCCTCAACTAAGTTTCCAAGTTGGGTTGTGTTTTTGTTTTTGTTTTGAATGTTTCGGCTTTTGATTTTTGATTTTTGGTAAATTAAGTTTATAGACACTGTTTTTACTTGTACTTTTCTTTGTTTCGTTATTTACTTTCTACTAATATTTTCAAAAGTTAAGTTAAGTTTTGAAAACAGAAAAAAAAGTAGCGTTTAAAAGCTCATTTTTGTTAAAATTTAAATGTCTTTTTAACCAAAGATGAAAACAAATATGAAGATAAAAACAAAAAGCTAAAAATAAAATTGATATCGAATGAGTCTAAATTAATTTCGAATGATTATAAGTATCTGTCAATGGGTTTTTGAACATGTAATTGTTATAACATCATCACTTACAAATAAGTTATTATAAGTCACACAAAACACGTTTTTATATACATAGAAAGTTATTGAGTCCTATGTTAACTGAAAAAAAAAATTGCTTTTTTTTTTTTTTTTTTCCTTGAAGGGATTAGGTTGTTGGAGAAAGGAATCAACAAAGAGTATAAGAAAAATGGAGCTGTCTTGGGTGGTAAAAATGGTGGAGATTTATTGACGACAATGAAGAAGAGAGCCCCAATCAGGGCTTTAAGAAAACCATATTCTCATTGGCTACCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTAGATTTTTATTATTATTATTTATATGGAATTATTTGAGGCGTACATAGAAACCGA ATGATTGCCATCATTATTGCTCTAAAAGCACAAGCTTTTCTTCATACATTCCAAATGAAGCTCTCTTCAATGGCGGTTCTTCTTCTTTTCCTTATCATGTCTCAAGCTCGAGGGATTAGGTTGTTGGAGAAAGGAATCAACAAAGAGTATAAGAAAAATGGAGCTGTCTTGGGTGGTAAAAATGGTGGAGATTTATTGACGACAATGAAGAAGAGAGCCCCAATCAGGGCTTTAAGAAAACCATATTCTCATTGGCTACCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTAGATTTTTATTATTATTATTTATATGGAATTATTTGAGGCGTACATAGAAACCGA ATGATTGCCATCATTATTGCTCTAAAAGCACAAGCTTTTCTTCATACATTCCAAATGAAGCTCTCTTCAATGGCGGTTCTTCTTCTTTTCCTTATCATGTCTCAAGCTCGAGGGATTAGGTTGTTGGAGAAAGGAATCAACAAAGAGTATAAGAAAAATGGAGCTGTCTTGGGTGGTAAAAATGGTGGAGATTTATTGACGACAATGAAGAAGAGAGCCCCAATCAGGGCTTTAAGAAAACCATATTCTCATTGGCTACCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTAG MIAIIIALKAQAFLHTFQMKLSSMAVLLLFLIMSQARGIRLLEKGINKEYKKNGAVLGGKNGGDLLTTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH Homology
BLAST of CcUC02G034450 vs. NCBI nr
Match: KAG6586348.1 (Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.1 bits (240), Expect = 9.8e-17 Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of CcUC02G034450 vs. NCBI nr
Match: KAE8126159.1 (hypothetical protein FH972_020903 [Carpinus fangiana]) HSP 1 Score: 62.0 bits (149), Expect = 3.5e-06 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0
BLAST of CcUC02G034450 vs. NCBI nr
Match: KAG6769267.1 (hypothetical protein POTOM_024887 [Populus tomentosa]) HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05 Identity = 39/98 (39.80%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of CcUC02G034450 vs. NCBI nr
Match: XP_024445403.1 (uncharacterized protein LOC112324937 [Populus trichocarpa]) HSP 1 Score: 55.5 bits (132), Expect = 3.3e-04 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CcUC02G034450 vs. NCBI nr
Match: RQP03046.1 (hypothetical protein POPTR_018G119850 [Populus trichocarpa]) HSP 1 Score: 54.7 bits (130), Expect = 5.6e-04 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CcUC02G034450 vs. ExPASy TrEMBL
Match: A0A0A0LJ48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009400 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.1e-29 Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of CcUC02G034450 vs. ExPASy TrEMBL
Match: A0A5N6RX03 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020903 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0
BLAST of CcUC02G034450 vs. ExPASy TrEMBL
Match: A0A6M2ES64 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05 Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 0
BLAST of CcUC02G034450 vs. ExPASy TrEMBL
Match: A0A3N7G9N2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G119850 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.7e-04 Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CcUC02G034450 vs. ExPASy TrEMBL
Match: A0A0D2U6Z9 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G057200 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.0e-04 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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