CcUC02G032580 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G032580
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein RALF-like 33
Location	CicolChr02: 28196371 .. 28198758 (-)
RNA-Seq Expression	CcUC02G032580
Synteny	CcUC02G032580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTCCAAAACGAAGAAGAAGCACAACCCACCGACGATTCGCCGGAGCCACTGCCGGAGCTGAGGAAACCGTCAATTCCGAGTAGAAGACAGAGACAGAGACAGTACGAGCTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTTGTCTTCAGCTGCTCCTCAACCGCCGTCCATGCCGGCCTCGGGATCCACCACAGTCTTGCATGGATTCCTAACCAATCCACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGTGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATTTTGGCCACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACACGGTACCGTGCTCGAGACGCGGTGCATCCTATTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAGCGCCATTACGAGGTGCCGGAGTTGAATAATTTGTTTGTACTCTTTGTTTAATAATCTCTCTCTCCCTTTCAATGTTCATTGATCTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCACTTCTTTATCTTTTCTTTGAGATGGCTTTGATTGTTATACAAATTGAAAAGGGGAGATTGATTATATAGTGTCGTCGTTGTCGTTGTTGTAAGTGGTGAAAAATTGTTGTGTGTTAATTAATTATATATCTCTGCTCAATAATGTGGTAGTCTTATAGTGGCTTGGATGTTCATCTCTCTTTCTTTTCAAAGAAAATGAGGAAGAAGAAAGACTGTAATTAGTCGAAATTAGGGAGAATCATGGAATCCCATCATGAGATAGGAGTGAGTGAAGATAAATTGATTGTTTTTTTTTAGTATATTTCTCTCCTAGAAAATGTCAGAGATTGTGTTTCTGGTGTTGTTTTTGGGTTTAGATGAACTTCACAAGGTCATTTCTTTCCATATCCTTGTTTTCTCTTTTATTTGTGGTAAAGAATCTTCAACTCTTTAGGGAAATTATTTAGAGAAAAAGTTTTCCAGGAGGAATCATACTACCATTTTGATTCTTGGTGCTCTTGAATGGGCTATCATCATGTTGAGATTGTGTAGTTTACTTTGAACTCACATTTTATTGACAACACAAATAGATAACAGGCAACTATTAGGATATGTATATCTCCGTCAATTGATTGTGGTCTACTTAGTTTTAGTAAATTTCTGATGATAATTATGCATAAGTACGGCTACTTCTCCGACCCAAATGTTTTCGGGTAACGGTTTCAAATTGGGTGGTGTCGTGGTGGCTATCTATCTAGGATGTTGAATGTTCTTCTATACTCTACTAACTAGGCTGGTTGTTTTATGAGATTGGTCGAATTGTACATGACGTGGATTGGACATTATATACATCTATGAGCCATCTATTTGAGTAAAGGTAAAGATATGTTTGTATGAATTGTTTAGACTTGAAAGATGGAAATTTTAAAGTTAAAAAGTGTCATCTTGAATACAAATGAGAGTCCCAAATAATTGAGGGTATGATTAGGCTTCTTGAACAAGGGAATTGAATTTGGCTGAAATTTGAGAAGTGGTTGTGATGTCCTGTTTGTTGTTTGATTTGACATGCTAAGAAAAAGCTAGATGTTGGATGGATATTATAGTTTGGTATGATTTTGACATGCCAATTTCCCATTTCTCCTTTTTTATAGTTTAAATGTCAGTTATGTGTGTGTGTGTGTATTAAACCATGGTTTAGGAGTAATTTTGAAGAAAGAAAATCCAAATTTAGAAAACCTCACACGACCTTACTTGAACAGGTTATGTTCTAAAGGTTGTACGTTTGAATCATTGAGTTCTAAAATCTGGAAAACGTTACCATATTTGACAGATACGATTTCCAAACTTTACCAACCAAACTCTACCCACCATATCTTTTGATAGCTTGAATGTTGACAAAACAATATCTCCTCTCTCTTCCCCCTTAACTTCAGTTCAGATCTGATATGAGTTCATATAGATGTTTTGAGAAGGCTATGCCAATCTCAAAAACGAGAGAAGAAAGGAAGAAACCCCAATTCTTTGTAGCCCTTTCCCAGATCTTACACAATTTCCTCTGACTGAGTTAGCTGTTTGGTAGGGAAGGTAGGGGTTTTGAGTAGTTTCACATTAGATCTTGTAGGATTTGAATCTGCTGCACAATCTTTTGATTTTGATTTGAATGGATTACAGATCTAACTTGTTTCTGCTGGGGTTTGTTAATTGTTGTATGATGTCGATTTTGAAAAATGAATCTGAGACCGTG

mRNA sequence

GAACTCCAAAACGAAGAAGAAGCACAACCCACCGACGATTCGCCGGAGCCACTGCCGGAGCTGAGGAAACCGTCAATTCCGAAGACAGAGACAGTACGAGCTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTTGTCTTCAGCTGCTCCTCAACCGCCGTCCATGCCGGCCTCGGGATCCACCACAGTCTTGCATGGATTCCTAACCAATCCACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGTGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATTTTGGCCACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACACGGTACCGTGCTCGAGACGCGGTGCATCCTATTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAGCGCCATTACGAGTAAATTTCTGATGATAATTATGCATAAGTACGGCTACTTCTCCGACCCAAATGTTTTCGGATCTAACTTGTTTCTGCTGGGGTTTGTTAATTGTTGTATGATGTCGATTTTGAAAAATGAATCTGAGACCGTG

Coding sequence (CDS)

GAACTCCAAAACGAAGAAGAAGCACAACCCACCGACGATTCGCCGGAGCCACTGCCGGAGCTGAGGAAACCGTCAATTCCGAAGACAGAGACAGTACGAGCTTTTTCTTGCATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTTGTCTTCAGCTGCTCCTCAACCGCCGTCCATGCCGGCCTCGGGATCCACCACAGTCTTGCATGGATTCCTAACCAATCCACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGTGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATTTTGGCCACTAGCCAGTACATCAGCTACGGCGCTCTTCGGAGGAACACGGTACCGTGCTCGAGACGCGGTGCATCCTATTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAGCGCCATTACGAGTAAATTTCTGATGATAATTATGCATAAGTACGGCTACTTCTCCGACCCAAATGTTTTCGGATCTAACTTGTTTCTGCTGGGGTTTGTTAATTGTTGTATGATGTCGATTTTGAAAAATGAATCTGAGACCGTG

Protein sequence

ELQNEEEAQPTDDSPEPLPELRKPSIPKTETVRAFSCMAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITSKFLMIIMHKYGYFSDPNVFGSNLFLLGFVNCCMMSILKNESETV

Homology

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BLAST of CcUC02G032580 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNSPTFFLICAAVFV+FSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

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BLAST of CcUC02G032580 vs. NCBI nr
Match: KGN60987.2 (hypothetical protein Csa_021272 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-58
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNSPTFFLICAAVF++FSCSST VHAGLGI HSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEINRRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AIT
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAIT 117

[Close]

BLAST of CcUC02G032580 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-58
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNS TFFLICAAVFVVFSCSSTAVH GLGIHHSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

[Close]

BLAST of CcUC02G032580 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 4.9e-57
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNS TFFLICAAVFVVFSCSSTAVH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

[Close]

BLAST of CcUC02G032580 vs. NCBI nr
Match: KAG7021083.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 4.9e-57
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNS TFFLICAAVFVVFSCSSTAVH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

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BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 71/111 (63.96%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 47  TFFLICAAVFVVFSCSSTAVHAGLGIH-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 106
           T FL    + VVF  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 107 EINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAI 154
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGCS I
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKI 115

[Close]

BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 70/118 (59.32%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 40  MAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAEC---FGGE 99
           M G ++    +I A + V F      + A +    S  ++P +S C G+IAEC      E
Sbjct: 1   MRGLSTKPVAIIIAILTVHF------LFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEE 60

Query: 100 EFEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           EFE DSEINRRILAT++YISYGALRRNTVPCSRRGASYYNC+ GAQANPYSRGCSAIT
Sbjct: 61  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAIT 112

[Close]

BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 80  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 139
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 140 NTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           NT+PCSRRGASYYNC+ GAQANPYSRGCSAIT
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAIT 133

[Close]

BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-27
Identity = 66/113 (58.41%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 46  PTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWI-PNQS--TCKGSIAECFG-GEEFEFD 105
           P+  ++C  +   F   + A  +G     +  W+ P +S   CKGSI EC    EEFE D
Sbjct: 4   PSGLILCVLIGAFFISMAAAGDSG-----AYDWVMPARSGGGCKGSIGECIAEEEEFELD 63

Query: 106 SEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           SE NRRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPYSRGCSAIT
Sbjct: 64  SESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAIT 111

[Close]

BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.9e-26
Identity = 57/73 (78.08%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 83  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGA 142
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 143 QANPYSRGCSAIT 155
           QANPYSRGCS IT
Sbjct: 103 QANPYSRGCSTIT 115

[Close]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.8e-58
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNS TFFLICAAVFVVFSCSSTAVH GLGIHHSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

[Close]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.8e-58
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNSPTFFLICAAVF++FSCSST VHAGLGI HSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEINRRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AIT
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAIT 117

[Close]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.4e-57
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNS TFFLICAAVFVVFSCSSTAVH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 117

[Close]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.5e-56
Identity = 109/117 (93.16%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGFNSPTFFLI AAVF++FSCSSTAVHAG+GI +SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEINRRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AIT
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAIT 117

[Close]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.9e-55
Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 38  MAMAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 97
           MAMAGF+SPT FLICAAVFVVF+CSSTAVH GLGIHHSLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 98  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           FEFDSEI+RRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAIT
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAIT 116

[Close]

BLAST of CcUC02G032580 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 71/111 (63.96%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 47  TFFLICAAVFVVFSCSSTAVHAGLGIH-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 106
           T FL    + VVF  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 107 EINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAI 154
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGCS I
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKI 115

[Close]

BLAST of CcUC02G032580 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 70/118 (59.32%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 40  MAGFNSPTFFLICAAVFVVFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAEC---FGGE 99
           M G ++    +I A + V F      + A +    S  ++P +S C G+IAEC      E
Sbjct: 1   MRGLSTKPVAIIIAILTVHF------LFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEE 60

Query: 100 EFEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           EFE DSEINRRILAT++YISYGALRRNTVPCSRRGASYYNC+ GAQANPYSRGCSAIT
Sbjct: 61  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAIT 112

[Close]

BLAST of CcUC02G032580 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 80  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 139
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 140 NTVPCSRRGASYYNCQPGAQANPYSRGCSAIT 155
           NT+PCSRRGASYYNC+ GAQANPYSRGCSAIT
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAIT 133

[Close]

BLAST of CcUC02G032580 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 57/73 (78.08%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 83  STCKGSIAECFG-GEEFEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGA 142
           S C GSIAEC    EE EFDS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 143 QANPYSRGCSAIT 155
           QANPYSRGCS IT
Sbjct: 103 QANPYSRGCSTIT 115

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BLAST of CcUC02G032580 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 81.3 bits (199), Expect = 9.9e-16
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 78  WIPNQSTCKGSIAECFG--GE-EFEFDSEINRRILATSQ-YISYGALRRNTVPCSRRGAS 137
           W   +S   G    C G  GE ++  DSE NRR LA  + YISYGALR+N VPCSRRG S
Sbjct: 25  WTLTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRS 84

Query: 138 YYNCQPGAQANPYSRGCSAIT 155
           YY+C+   +ANPY RGCS IT
Sbjct: 85  YYDCKKRKRANPYRRGCSVIT 103

The following BLAST results are available for this feature:

BLAST of CcUC02G032580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889183.1	1.2e-60	99.15	protein RALF-like 33 [Benincasa hispida]	[more]
KGN60987.2	5.8e-58	94.87	hypothetical protein Csa_021272 [Cucumis sativus]	[more]
XP_022966015.1	5.8e-58	95.73	protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu...	[more]
XP_022937540.1	4.9e-57	94.87	protein RALF-like 33 [Cucurbita moschata]	[more]
KAG7021083.1	4.9e-57	94.87	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC02G032580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRY3	1.7e-28	63.96	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q8L9P8	1.7e-28	59.32	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9LUS7	2.5e-27	67.39	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	4.2e-27	58.41	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9MA62	7.9e-26	78.08	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CcUC02G032580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQE4	2.8e-58	95.73	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A0A0LFW9	2.8e-58	94.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]
A0A6J1FH12	2.4e-57	94.87	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A5A7TYI2	1.5e-56	93.16	Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1DA82	2.9e-55	92.31	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1	[more]

BLAST of CcUC02G032580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02900.1	1.2e-29	63.96	rapid alkalinization factor 1	[more]
AT4G15800.1	1.2e-29	59.32	ralf-like 33	[more]
AT3G16570.1	1.7e-28	67.39	rapid alkalinization factor 23	[more]
AT3G05490.1	5.6e-27	78.08	ralf-like 22	[more]
AT2G33775.1	9.9e-16	55.56	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 96..154 e-value: 1.3E-27 score: 96.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 43..154
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 43..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G032580.1	CcUC02G032580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region