CcUC02G031780 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCATCAGCCAACAACAAGACACAAAAGCGCCCCAAGTCGCCCTCCTGCTGGTTCTCCATCTTCGGCTTGTTCAAGTCTCGAGATGGCGGAAGAAGGCGGGACGATACGATGACAATGGAAGATACACGAAAGGTGTGGCCGAGCGATGGCGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATTGATAGAAAAGCCAAAGCTTATATCGATAAGATCCATTATCAAATCCGCTCCTCCCAAACCGAATGA ATGGCCTCATCAGCCAACAACAAGACACAAAAGCGCCCCAAGTCGCCCTCCTGCTGGTTCTCCATCTTCGGCTTGTTCAAGTCTCGAGATGGCGGAAGAAGGCGGGACGATACGATGACAATGGAAGATACACGAAAGGTGTGGCCGAGCGATGGCGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATTGATAGAAAAGCCAAAGCTTATATCGATAAGATCCATTATCAAATCCGCTCCTCCCAAACCGAATGA ATGGCCTCATCAGCCAACAACAAGACACAAAAGCGCCCCAAGTCGCCCTCCTGCTGGTTCTCCATCTTCGGCTTGTTCAAGTCTCGAGATGGCGGAAGAAGGCGGGACGATACGATGACAATGGAAGATACACGAAAGGTGTGGCCGAGCGATGGCGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATTGATAGAAAAGCCAAAGCTTATATCGATAAGATCCATTATCAAATCCGCTCCTCCCAAACCGAATGA MASSANNKTQKRPKSPSCWFSIFGLFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE Homology
BLAST of CcUC02G031780 vs. NCBI nr
Match: KAA0056089.1 (hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ96428.1 hypothetical protein E5676_scaffold546G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 156.8 bits (395), Expect = 8.5e-35 Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CcUC02G031780 vs. NCBI nr
Match: KAG6586063.1 (hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.5 bits (306), Expect = 1.8e-24 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of CcUC02G031780 vs. NCBI nr
Match: KAG6599163.1 (hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.2 bits (300), Expect = 8.8e-24 Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of CcUC02G031780 vs. NCBI nr
Match: XP_021898970.1 (uncharacterized protein LOC110815469 [Carica papaya]) HSP 1 Score: 82.4 bits (202), Expect = 2.0e-12 Identity = 47/75 (62.67%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of CcUC02G031780 vs. NCBI nr
Match: ESR41577.1 (hypothetical protein CICLE_v10013222mg [Citrus clementina]) HSP 1 Score: 70.9 bits (172), Expect = 6.2e-09 Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CcUC02G031780 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CcUC02G031780 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34 Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CcUC02G031780 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.0e-09 Identity = 41/79 (51.90%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of CcUC02G031780 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.0e-09 Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CcUC02G031780 vs. ExPASy TrEMBL
Match: W9R5Q4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022654 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.0e-09 Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CcUC02G031780 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 7.3e-08 Identity = 35/69 (50.72%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of CcUC02G031780 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 2.8e-07 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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