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CcUC02G030840 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATTAAAACAAAATTAAACAGAACTTGCACGATAGAACCAAAGGAAAGATCATTGTTTTTTGCGTTGTTCTTCTTCCTCGCTCTGCTCCGCCTGTCGCCGCCCTAAAATCGCGAACCATAATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCCTTTCTTCTCGTCACGCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGTGCGTTCTCGCTATTTCTGTATGTCTAGGATATTTATAGGTTATATTTTTAGTTTTTTAGTTATTTGTTGTGGCTGGGTTTGGCGATGGAGTTATTTCGACTGTGGTATGAGTTCCTATTGCTGATTTGAATTTGGTTGTTGGTGAGAGGAGCCTGGTGGAGATTTATTAGAAGATTATAGCGCAGGCTAATGGAGTGTCCTTGATTTCTCGCCGTTGCTATCAGTGTTTTCAACCTAATGAGTTTTAAGAATTTACATGAATATGAGTTGTTTGAAAAATTTGTTATTGGGTGATTTGTTGACATTCTTTTTAGTGGAATTGTAGTTTATGAAATTATTTAGGCTAGTTTGATATTTGTTTTTAGCTTTTTGAATTTCGAGAATTAAGCTTATCAACACAACTTCTGCCTATGGATTTTTTTGTTTCGACGTCCACTTTTTAGGGATATATTCAAAAAAAAAAAAAAAAGTTTTTAGAAAGGTTGTTTTTGTACTTGAAATTTGATTATGAATTCGAATCTTTCAACTGAAAGGAAATTGTAAGGAATGAAGCGCTATTGTCAAAAATCAAATAGGACTATTTTCAAAAACTATATGATGGAGTTAATCATTGATGAGCTTAAAAAGAAACATTTCGACTTAACTAGCATTTTAGTGATAAAAATTGAAAACAATAATCTTGATGTTGGATCTCTCTTCGCATTCATATGTGCTACGATTCTGTCAATTAATTACTTTAATTTAGCGTTCAGATATTCATTTGCAGAACTATGTCTTAATCAGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACACTGGGCTGTTCAGGTGAGAAAATCAGGTATAAGATCCTCATTTAAGCATTTAATTTTCTTTTCTACATCTGTTGAAGTAGCTTTATTTCCAACTTGTATTGAAGAGGATTTAGTTACACTTAGGAAGGGTTGGTTACACATCCAGCTATTGATGAGAAGTAGGTTCTTTCCCCCATCTTCATTTGCAGTGAAGAATTTCTTTTTCCATAATTCATTGACACAACATACTTCCTCATCACCGAGCTTGGATATCTGGATAGCCAAGAAATAAGGATGGCTAGTGTATTTTTATTTTTATTTCTTTCATTTCCAATTTAAGATAGAAAAATGTCCCCTCACTTATCTTTCTAAATTAGCGTGTTTTTTTTAATCTTTTTATCCTTTTTTTTTTTTTTTTTTTGAAGAAACAAGAATTCCATTGATGAATACAAAAGAGGAAGCAAAAACTTCCGAAAAGTGATTCCTCATAGCTAAAAGTTTAGTGTGACTAGTCCTTGAAGGACTTCGTACATTTTCTCCAACTAAAAGCATTAAAGAGAACCAAGTCAATAAAATGATCACGAGCCTTATCTTTGTTACTGAAAATGTGGTTGTTCTTCTCTTTCTAAAGGGTTCATAACAATGCTCTGATAAGATAGTTTCCTCTTTTGAAGTGGTGGCCCATGAGCATATAGGAGAGGAAGTCATGAATGCTGATAGGGTATGTAGGTGCCAACTAAACGCTTCCAAAATCGAGGGCCAGAAGTGCCCAACAAAGGAACAAGTTTATAAAGACAGACTGATGGGAATACGTTTTGATGTGGAGCTTCTTTTGCATTCTGTCATTGGTGTTGATATTGTTGTGGCTGAGCTCCCAAAGAAAAATCTTTGCTCTCCTAGGGTACTTTCCATCCCAAAGGCATTTATTGAGGGGCCTCTCTCACTGTTTTGGGTGTTTTGGAGAGCGATTATAGGATTATAGGACTCCACTGAGTAAATGTTGAATGGTCTATTGGCAAACCCATTTATCCATAGTATTTGAAAGAGCAACCGTTTTTAGCGATTGTAGCAAGGAAGCCTATTCATTGATCTCATTTTCTTTTAAATTTCTATGTTGGTCAAGAGTCTATGATTTGAAGGTTCGATTCCAGCTTTCTGAAATGAAAGTGTATGACTTGTATGTTAGTATGTAAAGATCGAGGAAGGATTGAGGCAACTAGCTAGCACCAATCCATTGCTCATTCTAGGAAGATCTCTCCTTTCCCTCACCAATTTTTCGCCTACAAAGGTCTTTAATGCTGCTAGATAACTGAAGATCTACAGTCAACAGGCTTCAGGGATAATTTCCTCGAAGGGGGAGGCCATTGATAGCAAGGGTCAAATAAGTGATACTTAGACATGATAACCTTGCTTCAGAGGTTTTGTCATATATTAGTGAATCTTCAAATCCATTCAGCAAATCGAGCTTCATTTTTATTTTATTATTTTTTCTTTTACACTGCCAATGCGCAAGCCTCCGAGGTTGGGGGGGCTTATTCACAATATCACATCTAACATTGTGCATCCCTTTCCCCATCTTAAGGCCCTTCCCAAAAGAATTTTTTTATGACCGTTTCATCTGTCCTGCCACCTCAACTGGAATGTTAAACAGAGACTAGTAATAAATGGGGAGATTGGAGAGCGTAGTATTTTAAAGCGTTTTACGGCTGCCGTTAGTTATATAGCAGTATTTTCAATTATAGAACTTATTTGTCTTGCGTTCCATGATTGGCTCCCAAAAGGTGCTTGTTCTTGGTTTTTCCATATGTAGTTCATGGCATAAAATCCTTGATATGATACAATTTTTTCTGCTACCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCACGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGTAAGACCCTTTAAGCTAACTGAATCTTATCTTCTTCACATGTTCTTATGATATTCAATCTCCAGTATTCATACTTTCCTCTTGCCACAGGGTTTTTCCATAATTGCACTTAATCACGAAGATGTTTACATGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTGGCCACAGGTATAGCAAAGGACGTTCATGGGCAGGTACCGTTTTGTTGTTTTTATAACTTCCATGTTTATCAATATCATTTTATATACCTATTTACGTTTGATATATTTTTCCCTACATCTTCCTTGGTTGAGAATTGTGCAACAACTTGAATTACCTTTGTTTTCCTGATCTTAATTACCTATGCTTTCCTCTAGATTTCTCTCATTATATGTGCGGAGCAGTTGATGACATTATTGTCTCAATAATGTGATTGTATGGTGTTTAGTTCTCTAGATGTCAATGATTTCATACAAGTTCTATGCTGCAAGCAAGGAAAAAATCATTGAAAAATAGTCTTTCTTTTGATTGGAGGCTCTCTTGACCCCACTTTTCATTAATTCTGTTATATGAATAATATCACGAAAAAAATCAGAAAATACATAACCTTGTATACCGGAGAGAATATGAGCCTAATGAATTCACATTGTCTCCTTAATGAATTCACATTGTCTCCTTAAGACAACTTTACTCACTCTAGTGCCTAAATTTCATGAGTAAATTGTCTCCCAAGATAGAACAAACTACCTTTCTTATAGAAGCAGCACCTCATCCACAAGATTCCACGAACTATACTTTATGTAAATAAACCAAACTTCAAAAATTTTATAAAATAAAAAGGGAGAAAGTTTCAAGGAAGAAAAATGCTTATAAAAAGTTAAAATGCAATTTGAAGAAAAGACATTTATAGACTAATTCGTAGCCATTCGAATAATCGTGTCTTTTCTTTAATTTGGTTATTTATGAAAAAGACATACTTTCATAAAACAATACAACTCTACATGAATGGTCACGTCTCATTTATTCCAACAAATTCTTTCCCCATTTTAGATGTAAATTTAGGTAGTACTGTTGAGACAATATGATGCTAATTCGCTGTCAAGCTGCTAATCATACTTTTTCCTGTTTCATCGGTGGACTCGAATTTATTCATATTTCCTGCTGCCACTCGTTTGAGTGATCTTAATCATGTTTCATTTTCTTCTCTGCAGCTGACAGTTTTGAACAAGCCAGTTGAAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGAGGATAGTTTTGGGCAAGAAAAGTAGACAGATGTGTTTTGATAATTATACCTTTGTAGTACCCTTCGGCTTTTATTAGCCCAACTTCGAGCAACTGTTGCTACTCTTTGTGATGCAATTAGAAAGGCGCTCTATTGAAATTCTAACAAACAGAAAAAGACATT AAAAATTAAAACAAAATTAAACAGAACTTGCACGATAGAACCAAAGGAAAGATCATTGTTTTTTGCGTTGTTCTTCTTCCTCGCTCTGCTCCGCCTGTCGCCGCCCTAAAATCGCGAACCATAATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCCTTTCTTCTCGTCACGCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACACTGGGCTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCACGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTTTTCCATAATTGCACTTAATCACGAAGATGTTTACATGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTGGCCACAGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAGCCAGTTGAAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGAGGATAGTTTTGGGCAAGAAAAGTAGACAGATGTGTTTTGATAATTATACCTTTGTAGTACCCTTCGGCTTTTATTAGCCCAACTTCGAGCAACTGTTGCTACTCTTTGTGATGCAATTAGAAAGGCGCTCTATTGAAATTCTAACAAACAGAAAAAGACATT ATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCCTTTCTTCTCGTCACGCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACACTGGGCTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCACGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTTTTCCATAATTGCACTTAATCACGAAGATGTTTACATGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTGGCCACAGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAGCCAGTTGAAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGA MDRLTSNLLDEAIGFDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRALSSRHASNAVIFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVNALIQENKRHVTIVIDDIPLLEVAANGSINHVLDFLHYCHTLTSEIGFSIIALNHEDVYMDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVHNFHFYIKENGTEFFYSGSRA Homology
BLAST of CcUC02G030840 vs. NCBI nr
Match: XP_038893352.1 (elongator complex protein 6 [Benincasa hispida]) HSP 1 Score: 498.4 bits (1282), Expect = 3.7e-137 Identity = 245/260 (94.23%), Postives = 254/260 (97.69%), Query Frame = 0
BLAST of CcUC02G030840 vs. NCBI nr
Match: XP_022139240.1 (elongator complex protein 6 [Momordica charantia]) HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130 Identity = 233/259 (89.96%), Postives = 243/259 (93.82%), Query Frame = 0
BLAST of CcUC02G030840 vs. NCBI nr
Match: XP_011654922.1 (elongator complex protein 6 [Cucumis sativus] >KGN50480.1 hypothetical protein Csa_000558 [Cucumis sativus]) HSP 1 Score: 474.2 bits (1219), Expect = 7.4e-130 Identity = 236/260 (90.77%), Postives = 246/260 (94.62%), Query Frame = 0
BLAST of CcUC02G030840 vs. NCBI nr
Match: XP_008445832.1 (PREDICTED: elongator complex protein 6 [Cucumis melo] >KAA0034041.1 elongator complex protein 6 [Cucumis melo var. makuwa]) HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129 Identity = 234/260 (90.00%), Postives = 247/260 (95.00%), Query Frame = 0
BLAST of CcUC02G030840 vs. NCBI nr
Match: XP_023533346.1 (elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 236/260 (90.77%), Postives = 244/260 (93.85%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy Swiss-Prot
Match: Q8L9Y2 (Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.7e-73 Identity = 143/264 (54.17%), Postives = 191/264 (72.35%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy Swiss-Prot
Match: Q0IHA2 (Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17 Identity = 73/251 (29.08%), Postives = 126/251 (50.20%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy Swiss-Prot
Match: Q8BK75 (Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17 Identity = 73/249 (29.32%), Postives = 123/249 (49.40%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy Swiss-Prot
Match: B2RYG8 (Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.8e-17 Identity = 78/252 (30.95%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy Swiss-Prot
Match: Q0PNE2 (Elongator complex protein 6 OS=Homo sapiens OX=9606 GN=ELP6 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16 Identity = 73/252 (28.97%), Postives = 126/252 (50.00%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy TrEMBL
Match: A0A6J1CBS2 (elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130 Identity = 233/259 (89.96%), Postives = 243/259 (93.82%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy TrEMBL
Match: A0A0A0KLF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 3.6e-130 Identity = 236/260 (90.77%), Postives = 246/260 (94.62%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy TrEMBL
Match: A0A5A7SX52 (Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00250 PE=3 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130 Identity = 234/260 (90.00%), Postives = 247/260 (95.00%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy TrEMBL
Match: A0A1S3BDL6 (elongator complex protein 6 OS=Cucumis melo OX=3656 GN=LOC103488736 PE=3 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130 Identity = 234/260 (90.00%), Postives = 247/260 (95.00%), Query Frame = 0
BLAST of CcUC02G030840 vs. ExPASy TrEMBL
Match: A0A6J1GYT6 (elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458756 PE=3 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129 Identity = 233/260 (89.62%), Postives = 245/260 (94.23%), Query Frame = 0
BLAST of CcUC02G030840 vs. TAIR 10
Match: AT4G10090.1 (elongator protein 6 ) HSP 1 Score: 277.3 bits (708), Expect = 1.2e-74 Identity = 143/264 (54.17%), Postives = 191/264 (72.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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