![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G030590 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGTACGAAAAAGCGATTCACCGCGCAGCCCGAAAAATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGGTTTGAATATTAGCAATTTCGAATAAATAATTTCTCTTTCACTCGACTCTGTTTCTTTCTCTTTTGTAATCATCTTACGCTCGTCGATTCGATGATGGCTGTGATGTGAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGTCTCTCTCTATTCCCATTTTCTTGTTGGCTGATGAGAAAATCGATGAGAGTTCTGTTCTTTAGTAAACCTAGATTGTGGAGAAGAGTGAATGCCAATTCATTGTAATTCTTTTGCATCTTCTCTTGAATATAACAGTTTATATTTTTCCTAATCAGAACTCTTTTAGCTTTGAGAGTAGATTTTTTCCCCTCTGAAAAGGGAATCCTTGAGCTAGACTATTTAGTCTATTCTTTTACATCTTCTCAATAAATTGATTTTATGTTTAGTTTTTCCCTTATTCGAAATCAATACTTTATTATAGCTTTCCAATTAGAATTGTCTTTTATTAGAGAACGGAATGTTGTAATATTAGTCTATTCTTTTGCATCTTCTCATTGATTGATTTCAGTTTTCTCACTACAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTATCAGGTATTCTAGATTTTCTCCTCTCTCTTTTTGTTTTGCATTTTTCGTAGTCTTAAAAAACAATAATATTACCAACCATTGCTCTAAAGGTGTATGTTGTACTTCCGTGTTACCCTGCTGGTTCAGGATGATACCTTTGTCTTTCATATAATGTTTTTGGTAGGGACGCTATTAGGCGTATATTAGTAATTAGCTAGGAAGTTGGTTCGGGAGATTGGTTATGAATAGCGAGAGTGGTATTCAAGATTGACCTGCCCCTAGCCTCTCCAACAAATCTCGAGGAGGAAGTTCCAGTGGGCAGCCACAAGAACCCACAACGAGACTCGGTAGTCCCTTATACAGACAGTTGCCTCCGGTCAAAAGACTTAGAAGGATAGAGATACTGGAAGTATTTTTGAAGTATCTTTTTGGAGACAATATTTATGCGATTCCAAGAAGTGAGACCTGCAACCGTTTGATCGATTGTTAGGTGATCCAAAAGTTGCTGAACTATGGCCATCCTCCATTGTAGCCGTCTTTTAGTGTCTGAATTGTCTTGAAGAGAAAAAGGTTTGGTGTGCCATTTTTGTGTTGTGTGACAATGCACTTTTCTAGTGGGAATCTGTTGAAAGGTCTATTGATGTTAGTAATGGACTGTCACTTGGGCTTAGTTCGAGGAGGTATTCTTTAGAAAATAATTCCCTGCTAAAAATGGCACACGAAACCTTATCGCTTCAAGACAGTTCATGTGCTGAAAAATGGCTTTGATGGATGATAGTCACAGTTCAGCAACTGTCGAGTCACATTGAAATCTCGTAAATATTTTGTCTCCATTGAGATACTTCATGTATCTTGTTCCTCCTGAGTTATCTAACTGGTAGTGACTCATGTACAAAGGATTGCAGAGTCTCCAATAGTAAAAACATTGTGGGTCCTTGCGGCCAAGGTTCAAAATGTCGATGTCGACGGAAATATTGGGGCCTTAATTTTCGGAAATATCTGATTTCGATGGATATTTTTGGAAAAATAAAAAACATAAAAAAATTCAAAAAATAAATTTAAATTAGTAAATAAACTTTTTATGATTTTTAAACTCTATTATTTATATTATGTTTACATTAGTGACATTTTGTTGCTTGGTTATGTTTCGTGGTTTTTTCTATGATACAATAGAAATTTAGATTCACCTTTCATGTCAATGTCGAACTCATGGAAACATGGAAATATCGACATGTCAATGAAAATTTAATACTATGCTTGCAGCTGCCCCATTGGAACAATGCAACTTTTCAAAACCTTTATCGAGGGTCGTCACTACATGCTTAACTATTCTAATAAAACTTGGAGGTTAAATTTGCTTCACTTCAGAAGAAGATGGCGTAAAAATGTATATATAGGCTACTTTTAAGCAAAATGTCAATTGTTAGTGAGGTCCTTTAGCACAAGATGCAATTGACTCAAAAAACAGGAGCCCAAATTATTGTGGTGTTTATTGCTGCTTGTTTTTGGTTCATGTTATGCATGTTTACACGAAGAGTATCTGGTCTGGTTCACTCAAATTCCCCAGAAGGAAACAATATTAAGTTTCAAGGAAAAATTACGTTAAATGAAGTTTCTACGGAAAGACCTCTCTTGAAACTATCTTCTCCGATGCTCGATACAACCCAAATATATTGAACTATATAAGATTGCAGAATTACGGTAATTGGAATCTTCCCTCTCTTGAGATGCCACTCAGCCTCAAAACTGTTTACTTTACCTTCATTCCTTCCCCCTCACTCTATTTATATACAACAAGTTCCCACCAACAACTCCTTTGCTAAATACTAATATATCCTTAATATACCTCATAGTTTTCCCACTTCTATCCAAATAACTTTCCTATCTACTCTTTGATAAGGTTATACTGTGATGAAGAAGAGATCCATTCACACATCGTTTTTAATAATCGTTTTGAACTGTTACTCAGAAAACAAATCGCTTTGTTTTAGATCAATCTTATAATTCTTGATGAAGGTGAGTAACTAGAAACGAGATTGTCTATTATCTCACCATTCAGATGTGGGGCTTCTTGACGAGGATACGACACAGCTAAAATTAGCAGGAAAAGAGCTTACGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGGTATTTCGTCATTAAATTGTTTCCTTCGTTTGTTTTCTTCCTATAGACGACCAATTTCTCCAATTATCTATCAGATCGTTCTTAAACTACAACCGGAAATCACACCCCCCAGTTGAATACTGATATCGACTAACAAGTGGAACGTGCTTGATGACGTTCTGTGAAACCTGGTCAAGTTCAAATTCCTGTTATTATGTGCAACTTTTGGGCTTTGATGCTCATGGGATATGGAAAAGTGGACAAGATTTTGGATGTGAGAAAGTAGATAATATGTAAAATATTTTTGTTTGCTGACTGATATTTTGTATCATATATCAGATGGATTTTGAATATGCTTAATCCTTACATCATCAATATATTCTCTCTGTC CGAGTACGAAAAAGCGATTCACCGCGCAGCCCGAAAAATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTATCAGATGTGGGGCTTCTTGACGAGGATACGACACAGCTAAAATTAGCAGGAAAAGAGCTTACGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGATCGTTCTTAAACTACAACCGGAAATCACACCCCCCAGTTGAATACTGATATCGACTAACAAGTGGAACGTGCTTGATGACGTTCTGTGAAACCTGGTCAAGTTCAAATTCCTGTTATTATGTGCAACTTTTGGGCTTTGATGCTCATGGGATATGGAAAAGTGGACAAGATTTTGGATGTGAGAAAGTAGATAATATGTAAAATATTTTTGTTTGCTGACTGATATTTTGTATCATATATCAGATGGATTTTGAATATGCTTAATCCTTACATCATCAATATATTCTCTCTGTC ATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGAGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTATCAGATGTGGGGCTTCTTGACGAGGATACGACACAGCTAAAATTAGCAGGAAAAGAGCTTACGAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGATCGTTCTTAAACTACAACCGGAAATCACACCCCCCAGTTGA MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSEFEPRLLPFHGDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQYQQLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS Homology
BLAST of CcUC02G030590 vs. NCBI nr
Match: XP_038891955.1 (cilia- and flagella-associated protein 298-B-like isoform X2 [Benincasa hispida]) HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77 Identity = 155/174 (89.08%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of CcUC02G030590 vs. NCBI nr
Match: XP_008461611.1 (PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 3.1e-76 Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of CcUC02G030590 vs. NCBI nr
Match: XP_004143588.1 (cilia- and flagella-associated protein 298-B isoform X2 [Cucumis sativus] >KGN50501.1 hypothetical protein Csa_000186 [Cucumis sativus]) HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76 Identity = 151/174 (86.78%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of CcUC02G030590 vs. NCBI nr
Match: XP_038891954.1 (cilia- and flagella-associated protein 298-like isoform X1 [Benincasa hispida]) HSP 1 Score: 293.9 bits (751), Expect = 9.1e-76 Identity = 154/187 (82.35%), Postives = 163/187 (87.17%), Query Frame = 0
BLAST of CcUC02G030590 vs. NCBI nr
Match: KAG6601023.1 (Cilia- and flagella-associated protein 298-B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74 Identity = 149/174 (85.63%), Postives = 158/174 (90.80%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy Swiss-Prot
Match: Q8BL95 (Cilia- and flagella-associated protein 298 OS=Mus musculus OX=10090 GN=Cfap298 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.6e-09 Identity = 64/241 (26.56%), Postives = 95/241 (39.42%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy Swiss-Prot
Match: A0A1L8H579 (Cilia- and flagella-associated protein 298-B OS=Xenopus laevis OX=8355 GN=cfap298-b PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-09 Identity = 55/207 (26.57%), Postives = 96/207 (46.38%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy Swiss-Prot
Match: Q5U3Z0 (Cilia- and flagella-associated protein 298 OS=Rattus norvegicus OX=10116 GN=Cfap298 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.8e-09 Identity = 63/241 (26.14%), Postives = 95/241 (39.42%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy Swiss-Prot
Match: A0A1L8HCK2 (Cilia- and flagella-associated protein 298-A OS=Xenopus laevis OX=8355 GN=cfap298-a PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08 Identity = 56/224 (25.00%), Postives = 99/224 (44.20%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy Swiss-Prot
Match: Q6DRC3 (Cilia- and flagella-associated protein 298 OS=Danio rerio OX=7955 GN=cfap298 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08 Identity = 56/226 (24.78%), Postives = 94/226 (41.59%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy TrEMBL
Match: A0A1S3CF44 (UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76 Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy TrEMBL
Match: A0A0A0KS44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.4e-76 Identity = 151/174 (86.78%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy TrEMBL
Match: A0A6J1GZ65 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111458205 PE=3 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 8.3e-75 Identity = 147/174 (84.48%), Postives = 158/174 (90.80%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy TrEMBL
Match: A0A6J1JQP0 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488970 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.1e-70 Identity = 142/174 (81.61%), Postives = 153/174 (87.93%), Query Frame = 0
BLAST of CcUC02G030590 vs. ExPASy TrEMBL
Match: A0A5B7BDZ1 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_035857 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 7.3e-47 Identity = 106/178 (59.55%), Postives = 127/178 (71.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|