![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G030580 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAAGTAAATTAGAAAATTAATTTTAATAACTTCAAAAAACGTTAAAATATCTAAAAAGTCAAAAATAATCGTTTCTTCCTCTTATGTGCCCTAACCCACATTTACACTCCAAAAGATGAACTTGCCATAAATACTAACTATTTGCCATTGCAATTTGTTGCCTGTCGAAGTTTGTCGTCATCACAACCTTTCGTTCGTTGCGGGCAAGATGGAGAAATTTATCAAAATTCTCAATTAGCAAACAGAGAACTACATAACTTGATTACTAAACTGGTTGTTGGACTTAAAAAGGGCAAAGACATATTCATGACCCACTTCTATTCTCAATTAGTTATTAAGTTTTGAAACATTTCAACTCCGTTCCTAGATTTTTAAAATGTTACAATTTTACCTTTGAAATTTCTTTTTTGTTTCAATTTCGTGTTTATGTTTCTAGATTTATATTTTTAACTTTGATTTTTCATTTAATGCTCACTTTCAACCATTAACATTAATACATAATAATTAATTTCAAATAATTATGTTGAATTTAAAATTTTAAATTGTATAAAGATGAAAAATAGAATTGAACTTAATTAATTATAATTTTTTTAATTCTTTTGAATTAATTAGTATGCATTAATACTAAATACAAAATGTAAGTATTAAAAAGAAACTGAGAAATGAAAATAATCTAACTCTAGATTAAAAGTGTAAATATTTAAATTATATAGCAAATTAAAATAAAATTAAAATCTCAAAAAGTAAAATAGAAACATTTTAAAATTTATAGATATATGAATTATTTGGATTAATTTAAAAAATAAATTGTTTTAAAAAATTTATTTTCATTTAAACACTTTTTGATAAAAATTGAATTGTTTAAAATAAAAATACTGATAATTTTCAAAATTTATTTTAAATGATTTTTGAACACTTTATTATTTTTGAAATGACTTAATTTTTTAATTAAATATTTTAATAAGATGGTAAAGAAATGAATCGTTCCAATAAAAAAAATAAAGACACCTGAATAGCAGAGCAGCACGCAAAAACCGAAAATAAATAAAGTAAAAGATAATAATACCCTTGGAAAGTGCAACTCCCACATCGGAAAGATGCTAAAGGGAATTGGTCCAGTGCGTATATAAAGCCATCATCATTTCAATTCTAAGTCACGGAGCCGTGCGGTGAGCGCAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCCATAAGCGGCATACGCCTATTTTTGGAGGACTTTCCTTCGGGATTGGTCCCTACAATTGTACTCTCAAATATTTTTTTTTATAAATAATGAAATAAGCGTTTTTATTTTATTTTGTTTTTTAGTTTTCAGAATTTTACCTTTTTGAATCAAAATTTTAGACAGCAACTATAA ATGTGGAAATCACGGAGCCGTGCGGTGAGCGCAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCCATAAGCGGCATACGCCTATTTTTGGAGGACTTTCCTTCGGGATTGGTCCCTACAATTAATTTTACCTTTTTGAATCAAAATTTTAGACAGCAACTATAA ATGTGGAAATCACGGAGCCGTGCGGTGAGCGCAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCCATAAGCGGCATACGCCTATTTTTGGAGGACTTTCCTTCGGGATTGGTCCCTACAATTAATTTTACCTTTTTGAATCAAAATTTTAGACAGCAACTATAA MWKSRSRAVSAERTILSPFTKEYRVLAAISGIRLFLEDFPSGLVPTINFTFLNQNFRQQL Homology
BLAST of CcUC02G030580 vs. NCBI nr
Match: OMO58839.1 (hypothetical protein CCACVL1_25320, partial [Corchorus capsularis]) HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08 Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of CcUC02G030580 vs. NCBI nr
Match: OMP02649.1 (monocarboxylate transporter 9 [Corchorus olitorius]) HSP 1 Score: 67.0 bits (162), Expect = 6.3e-08 Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of CcUC02G030580 vs. NCBI nr
Match: KAA0057788.1 (monocarboxylate transporter 9 [Cucumis melo var. makuwa] >TYJ98472.1 monocarboxylate transporter 9 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 3.1e-07 Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of CcUC02G030580 vs. NCBI nr
Match: KAG8480455.1 (hypothetical protein CXB51_025076 [Gossypium anomalum]) HSP 1 Score: 63.5 bits (153), Expect = 6.9e-07 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
BLAST of CcUC02G030580 vs. NCBI nr
Match: KJB73689.1 (hypothetical protein B456_011G243800 [Gossypium raimondii]) HSP 1 Score: 63.5 bits (153), Expect = 6.9e-07 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
BLAST of CcUC02G030580 vs. ExPASy TrEMBL
Match: A0A1R3GLA3 (Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_25320 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08 Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of CcUC02G030580 vs. ExPASy TrEMBL
Match: A0A1R3K6E7 (Monocarboxylate transporter 9 OS=Corchorus olitorius OX=93759 GN=COLO4_10930 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-08 Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of CcUC02G030580 vs. ExPASy TrEMBL
Match: A0A5A7URK2 (Monocarboxylate transporter 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00740 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07 Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of CcUC02G030580 vs. ExPASy TrEMBL
Match: A0A0D2UXN6 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G243800 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-07 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
BLAST of CcUC02G030580 vs. ExPASy TrEMBL
Match: A0A6A1VV19 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G010380 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.7e-07 Identity = 34/48 (70.83%), Postives = 37/48 (77.08%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|