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CcUC02G030350 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGACGTCGCCGCCGCCGCCGCCGCCACCAGCACTGGCTCCACCTATTCCGCTGCTCTAACGTTTCAATTTCGCCATTCAAAATCCTCCACCATCCCCCACCAATGGCGGATCAGAGCTTCCTCTGCTGCATCCACAGTCGATCTCACCGCTCTTCAATCCGCTATCGACAAGGTTCAATTCCTCCGCGTAATTTCATTTCTATGCCGTTTGATTACTTACACAAATCCCTTTTCTAAAATGCAGAAAGATAGTAACGCAGTTAAGGAAGCGCTGGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCCCGCCGTACGGTCAGTCCCCATTTCCAAGTCCGAAGTTCTTCTTATGGGAAACTTCAATCCATTACCATTTTTCCTCCTTCTTCCCTATTTATATTATATGAAACTACGAGAATTATTATATGAATAATGTCACATAATAATAACAAAAATTACAGAACCTTTATATATGAGAGAATCTGAGCGAATTCATGTTAGTCTCATAATTTTACTCACTCACTCTAGTGCTAATTCTCTCCTAGATAGAACAAATTGCCTTTCTTATAGAAGCAACACCTCGTCCAAAAGTTACAAAGTGGAGTAAACCGAACTTCAACGAATTTTTAGAATGGAAGCAAAGTTTATGAGAGAAAAGTGTTAATGGAAAAAGCAAAGTTTTAATTTAGAGGAGAGACATATTTATAGATTAATTTGTGACCATTTGAATAGTAACGTCTCTTCTTCAAATTGGTTAATAATTAATTAAAAAATGCATACATCCATAAAAGAATACAACTCATAGAATTTGAAAGGATACAACACTAAAAGGCGGGTTACATATCATTTATACATGCATATCAATGATGCCCATCTATTCCTTTAGTATTCTAGTTGTGTGTAACATGTATATAAGTTGATTCTATATACACCAGACTACCCTTCGGGAGCTGACAACGCTTGGAATTAAAAATGCGGAGAATCTTGCTATTCCTAGTGTCAGAAATGATGTGAGTTCCTCTTTAACATCCTTGCATTTGGTTTGTTATCTTTTAGAATTTTTGGTTTTGAGATGACAAATTGTTGGTGCCTCCAAAGATATATCAGATTAGAGTCCTATCGTTATAGTGCTTCAAAGAGTCTGTTTGTCCTGTTTGCATATATCAGGTTTCTTGAAACTTATGTGCATTTGATGCTCTCAAAACAGGCAGCTTTCCTTTTCACTGTTGTGGGAACGACTGGATTTTTGGGCGTCCTTGCAGGGCAGCTTCCTGGGGTAATATAAACAGGATATTTAGGTCCTGTTTGATAATCATTTGGTTTTTTAAAATGAGGCTCATAAATACTACTTCCAACACCACGACAGGTTTTGAAAACTAAAAGAAATAGATTTTAGAAACTTACTTTTGTTTTTGGAATTTGGCTAAGAAATCATGTATAGTTAAGAAAGATGAAAATCATAGTATATAAATTGTTAGAAAACAAACACAATTTTCAAAAATTAAATGATGGTTAAATGGGCCTTAGTTCCTCATTTAACCACCCTTTTGACTGGTGAACTCTATGTTTGTATACTAATTCAAAGATCCTTAATCTTATTGTGAGGGTGAACTCTTTTTGAAACTTTGGATCCATAATAGGATTGGGGCTTCTTTGTGCCATACTTGATTGGCAGCATATCGCTAATTGTTTTAGCTGTTGGAAGCATTTCTCCTGGGTATAAGTTTATTTGTGGTGTATAGCTATTCTCACTTTTCTTCTATTGTTAGCTTCTCTTCCATGACATTTTGTATGTGGATTGCCTCTTTCTTAGACTTCTTCAAGCTGCTATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGCGCATGAAGCTGCACATTTCTTGGGTAAAGTCTTTGTATGAAAAGAAAAGTAATAACTTATCATTAGATGTGCCTAGTTCACTTGGATCTAATAATGATCTCCTCTGAATTTTAGTTGCTTACTTGCTTGGACTTCCTATTCTGGATTATTCACTAGACATTGGAAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATATAGTGGCCAGCTTGATGATAAGGAACTTGACAGGTAACTGACTACTCTCCTCTATGAGATCAAATCTAGCATGTGATATTGATGCTAGTAGAAGCTAATAGTTCTCTGCATTTAGGCCCCTTCGGTAGCTATTTTGTTTTTGGTTTTTGGTTTTTGAAAATGGAACCTATTTCCTCTCAATTTCCTTCAATGGTTTAAATATTTCTTAAACAAATGAGTTAAATTCTTAGCTAAACTTCAAAAACAAGAAAACAAGTTTTTGAAAACCTACTTTTTTTAATTTTCAAAGCTTTGCTTGATTTTTTAAAATATTGGTAAAAAGTAGATAAAAAAGTTAGAAATTTATAGGTAGAATGAGTGTTTATAGCCTATTTTTGTTAAATCAACGATTGACCCAAAAGCTTCATTCTTTGATACCATTGTTAAACCACCAATTGACCCAAAAGCTTAAGATGAATGATGGTATGATTTGCAAGTTGTGTAGCATCATTAATATTATTATTTTCAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGACAAAGTGGTTGGCCAATCAGCTGATCTCTTCACTCTGCAGGTTTCAAATTGCTATTGAATTCATGAAACAGATCCTTTACCTCTCTCCCCTCAGCAATCTAACATTTACATTCACTTGGTTCTCTCAGAGGTTTATCAATAGATCAAAACCAAAACTTGGTAAGGATCAGCAACAGAACCTGACTAGATGGGCTGTAAGTAATCAACTTTCACCAATCTGGATAGTTTCTTAAAATCTTTTTGTTTAAGAACTCAAGTGTTTTGCATATTCATCTGATCATTTCCAAGTAATGCATTACATGTTTGCTAAAAATATGTTTTAGTCCCTAACATTTTGGAGATTTTTTCCCATTAAGTTCGTATTGTTTTAAACGTTTCACTTTAATCTCTTTATGTTTTATCGTTTTTCAATTCAGTCTCTCATTGCAGGTGAATGTTAAGATTGACTGATGGTACACTATTAACAAAAATTTAAGGGATATAGAAAGGTCATCCAAGAGAAGAAAGTTTCTAATAGAAATTTCGAGTTTTCATCTCTTAAATGCCTTTTTCTCCTCCTCTAAATTTCTTTTGTCAAAACTTAGTATGATGCCATATAAGTTTGTTGTCGATCAATACTAATATTCATATATAGTAGGAGACCAAATTGGTACTTTTTAAACAATAGTGACTGAGTTGAAAGAAAATTACTCAGATATTAGGAACCATAGCATATGTGTAGCCTAAAAAGTTTTTAAAAAATCTCGTATTGGTGAATGAATACTGAAGCAAATTCCCTGGACTTTGTTGTAGGTTTTATTTTCTGGTTCCCTTCTGAAGAATAACAAATTGATACATGAAGCCCTCATCAAAGCAATGTCAGAAAAAGCATCTGTAATAGAATGCTTTGAAGCCATTGAGAAAGCTGCATAGCTAAT ATGCTGGACGTCGCCGCCGCCGCCGCCGCCACCAGCACTGGCTCCACCTATTCCGCTGCTCTAACGTTTCAATTTCGCCATTCAAAATCCTCCACCATCCCCCACCAATGGCGGATCAGAGCTTCCTCTGCTGCATCCACAGTCGATCTCACCGCTCTTCAATCCGCTATCGACAAGGTTCAATTCCTCCGCGTAATTTCATTTCTATGCCGTTTGATTACTTACACAAATCCCTTTTCTAAAATGCAGAAAGATAGTAACGCAGTTAAGGAAGCGCTGGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCCCGCCGTACGACTACCCTTCGGGAGCTGACAACGCTTGGAATTAAAAATGCGGAGAATCTTGCTATTCCTAGTGTCAGAAATGATGATTGGGGCTTCTTTGTGCCATACTTGATTGGCAGCATATCGCTAATTGTTTTAGCTGTTGGAAGCATTTCTCCTGGACTTCTTCAAGCTGCTATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGCGCATGAAGCTGCACATTTCTTGGTTGCTTACTTGCTTGGACTTCCTATTCTGGATTATTCACTAGACATTGGAAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATATAGTGGCCAGCTTGATGATAAGGAACTTGACAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGACAAAGTGGTTGGCCAATCAGCTGATCTCTTCACTCTGCAGAGGTTTATCAATAGATCAAAACCAAAACTTGGTAAGGATCAGCAACAGAACCTGACTAGATGGGCTGTTTTATTTTCTGGTTCCCTTCTGAAGAATAACAAATTGATACATGAAGCCCTCATCAAAGCAATGTCAGAAAAAGCATCTGTAATAGAATGCTTTGAAGCCATTGAGAAAGCTGCATAGCTAAT ATGCTGGACGTCGCCGCCGCCGCCGCCGCCACCAGCACTGGCTCCACCTATTCCGCTGCTCTAACGTTTCAATTTCGCCATTCAAAATCCTCCACCATCCCCCACCAATGGCGGATCAGAGCTTCCTCTGCTGCATCCACAGTCGATCTCACCGCTCTTCAATCCGCTATCGACAAGGTTCAATTCCTCCGCGTAATTTCATTTCTATGCCGTTTGATTACTTACACAAATCCCTTTTCTAAAATGCAGAAAGATAGTAACGCAGTTAAGGAAGCGCTGGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCCCGCCGTACGACTACCCTTCGGGAGCTGACAACGCTTGGAATTAAAAATGCGGAGAATCTTGCTATTCCTAGTGTCAGAAATGATGATTGGGGCTTCTTTGTGCCATACTTGATTGGCAGCATATCGCTAATTGTTTTAGCTGTTGGAAGCATTTCTCCTGGACTTCTTCAAGCTGCTATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGCGCATGAAGCTGCACATTTCTTGGTTGCTTACTTGCTTGGACTTCCTATTCTGGATTATTCACTAGACATTGGAAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATATAGTGGCCAGCTTGATGATAAGGAACTTGACAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGACAAAGTGGTTGGCCAATCAGCTGATCTCTTCACTCTGCAGAGGTTTATCAATAGATCAAAACCAAAACTTGGTAAGGATCAGCAACAGAACCTGACTAGATGGGCTGTTTTATTTTCTGGTTCCCTTCTGAAGAATAACAAATTGATACATGAAGCCCTCATCAAAGCAATGTCAGAAAAAGCATCTGTAATAGAATGCTTTGAAGCCATTGAGAAAGCTGCATAG MLDVAAAAAATSTGSTYSAALTFQFRHSKSSTIPHQWRIRASSAASTVDLTALQSAIDKVQFLRVISFLCRLITYTNPFSKMQKDSNAVKEALDQLREVGWAKKWSSQPYVSRRTTTLRELTTLGIKNAENLAIPSVRNDDWGFFVPYLIGSISLIVLAVGSISPGLLQAAIDGFSSFFPDYQERIAAHEAAHFLVAYLLGLPILDYSLDIGKEHVNLIDERLEKLIYSGQLDDKELDRLAVVAMAGLAAEGLKYDKVVGQSADLFTLQRFINRSKPKLGKDQQQNLTRWAVLFSGSLLKNNKLIHEALIKAMSEKASVIECFEAIEKAA Homology
BLAST of CcUC02G030350 vs. NCBI nr
Match: XP_008457887.1 (PREDICTED: uncharacterized protein LOC103497464 [Cucumis melo] >KAA0045883.1 uncharacterized protein E6C27_scaffold243G004190 [Cucumis melo var. makuwa] >TYK13704.1 uncharacterized protein E5676_scaffold299G002280 [Cucumis melo var. makuwa]) HSP 1 Score: 528.5 bits (1360), Expect = 4.2e-146 Identity = 290/353 (82.15%), Postives = 295/353 (83.57%), Query Frame = 0
BLAST of CcUC02G030350 vs. NCBI nr
Match: XP_038900619.1 (uncharacterized protein LOC120087791 isoform X1 [Benincasa hispida]) HSP 1 Score: 525.8 bits (1353), Expect = 2.7e-145 Identity = 290/353 (82.15%), Postives = 293/353 (83.00%), Query Frame = 0
BLAST of CcUC02G030350 vs. NCBI nr
Match: XP_004148439.1 (uncharacterized protein LOC101209062 isoform X1 [Cucumis sativus] >KGN62075.1 hypothetical protein Csa_006037 [Cucumis sativus]) HSP 1 Score: 525.4 bits (1352), Expect = 3.5e-145 Identity = 288/353 (81.59%), Postives = 294/353 (83.29%), Query Frame = 0
BLAST of CcUC02G030350 vs. NCBI nr
Match: XP_022928042.1 (uncharacterized protein LOC111434945 [Cucurbita moschata] >KAG6571396.1 hypothetical protein SDJN03_30311, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011162.1 hypothetical protein SDJN02_27960 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144 Identity = 289/353 (81.87%), Postives = 293/353 (83.00%), Query Frame = 0
BLAST of CcUC02G030350 vs. NCBI nr
Match: XP_023512717.1 (uncharacterized protein LOC111777385 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 521.9 bits (1343), Expect = 3.9e-144 Identity = 288/353 (81.59%), Postives = 292/353 (82.72%), Query Frame = 0
BLAST of CcUC02G030350 vs. ExPASy TrEMBL
Match: A0A5D3CRP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002280 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 2.0e-146 Identity = 290/353 (82.15%), Postives = 295/353 (83.57%), Query Frame = 0
BLAST of CcUC02G030350 vs. ExPASy TrEMBL
Match: A0A1S3C771 (uncharacterized protein LOC103497464 OS=Cucumis melo OX=3656 GN=LOC103497464 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 2.0e-146 Identity = 290/353 (82.15%), Postives = 295/353 (83.57%), Query Frame = 0
BLAST of CcUC02G030350 vs. ExPASy TrEMBL
Match: A0A0A0LJM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296000 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.7e-145 Identity = 288/353 (81.59%), Postives = 294/353 (83.29%), Query Frame = 0
BLAST of CcUC02G030350 vs. ExPASy TrEMBL
Match: A0A6J1EIT3 (uncharacterized protein LOC111434945 OS=Cucurbita moschata OX=3662 GN=LOC111434945 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 6.5e-145 Identity = 289/353 (81.87%), Postives = 293/353 (83.00%), Query Frame = 0
BLAST of CcUC02G030350 vs. ExPASy TrEMBL
Match: A0A6J1I421 (uncharacterized protein LOC111470395 OS=Cucurbita maxima OX=3661 GN=LOC111470395 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 9.4e-144 Identity = 286/353 (81.02%), Postives = 292/353 (82.72%), Query Frame = 0
BLAST of CcUC02G030350 vs. TAIR 10
Match: AT2G21960.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 411.4 bits (1056), Expect = 6.9e-115 Identity = 231/354 (65.25%), Postives = 262/354 (74.01%), Query Frame = 0
BLAST of CcUC02G030350 vs. TAIR 10
Match: AT1G56180.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 5.5e-19 Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 0
BLAST of CcUC02G030350 vs. TAIR 10
Match: AT5G27290.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-11 Identity = 58/192 (30.21%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CcUC02G030350 vs. TAIR 10
Match: AT5G27290.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 199 Blast hits to 194 proteins in 57 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 5.9e-05 Identity = 36/116 (31.03%), Postives = 60/116 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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