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CcUC02G030300 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCATCCCGGCTGCCATTGTTGAGACCTCCGACCGATCATGGCCAAGTGGTGGCGCTCCGCCGGAACGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCCCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAAATCCTTGAGAAAAACCCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAGTAAACCATTCACTTATCTCTACCTGTTTGTTTGTGTTTAATTCAACCTGATTTTTCTTGCATTTTCATGTTATGGAGTAACTGCTTGAGAATTTTTAGATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGTAACCATGGAAGAAATGTTTCTTTAATTCCCAAGCTCATGTTAGTCAAATTCTCGGTTTTGTGAATGTGGACTTAATTTTAGCGATTGCTAGATATTGGGGAATTAGTTTATTGAATCCAGAAAATATACTTAGCCGTTTATGCAATTTTATTATTGCCAGGATGACACGAAGTTTTATCTTAAGGGAAGTATAAAATCTAGTTTCAATTGGTTTCACAATTTGGTCCCATCACTTTGGCTTTTCCTTACTATACGAAATGTGCACACCCCACTATAGAGTGCCACAAGAAATTTCCCAAGACAAGATATCATAAAAGCCAAAACTAACTATAAGAAAGCTTTCCGATGAAAATTAATTCTAGTAGAAGACTAATTCTTAAATTCGTTGGAAAAAAATACACCAAGAAACCGTGCAATGTTTAATCATCTCAAATCTTTTCCTCCTGGATTGCTCGAAGATTCTATGTTTAATCACCCCAAAGTAAGTAGCTTTAACACTTGTTGATCCACGTAACTTTACCTTTCTTAATTCAGTCAATGCCTCAGAGTGACATAAAAATGTTGTTTTTAGCTATTAAATCATATGCTTAAGCGATCTGAAGACTTAAGATACTCTCTCCACAAAACTGAGCATTTATTGAGAGAGAGAGAGAGAAAGAAAAAAGCATTGTTCAAAATGAACCAAGGGCTCCTATCAAGCAAGATGAAACCTAATGGATAATTACAAAAGTCCATACGCATCTAAGTCTAGAGGGAGGTATGCAATTGGAACCTAACAAGGAACCAAACTTTTCCTTAGACCGCCCTGCACCTGTTGAATCTTTTCATAAAGGTGAACCAGACCATTATACTGAATTTTCTAGAACACGGGACTGATGCAAATGAAGAAATGAAGTTAAGGAAAGCTCAATTTATAATGTCACTTAGGGGATTTTTGGGCCAAGAAGTTGGGAAGTAGGGAGTTGTGAACTCCACTCTTTGTTTGGTCTAAGGAGTTCATGGATCCCACTACTAAAAATTGTCAATTTTATACCTTATTAACTCCTTATGTTGTGGGCTCTAGGAGTTCACAACTTCTCAGACTTTACAACTCAACTTCTTGTCCCAAATGCCCCTGTAGTAGCACACTTTTTTTCTTCAAAGAACTATCTGATACTTTCTTGAATGTACAATTAACTGAAAGTCCAGCCCTCTAACCAACCTTACCTACATACACTAACAGACTCAATGGGGGCTCCACACTTACCAGAAAATCACCTCTCACACGATTTCCTCTCTCCCCGCCCACCTACGTTCATACATGATACACTTTAGTTATTTGGGGACCTATTCTCAAGGTTGCAATTTTGTTGCATTGTGGAATGCTGCAAGTGTATTTGTTTTGTTTTGTTTGCATCGATCACATTTCTTTAGTTGTTAATATAAAGCTTTTTGGACCATTTTTGCGAGCCATGTTAAAACCTTTTATTCATTTGTGATTAACAAATCTTGAGATGTATTGGCTGAAGATGTATCATGAAACATCGACGTCTCTTGGGTTCATATGGCATTTCCGAAGTTCAAACTATGAAACATGGTCAAACTTAGGTAGATGATACACCATTAGCTTTTTCAACTTGTTCTATTATGGTACCCTCTGATGCCTGCAAGGTTTTGCAAATTTGCTGCGACAGTCACAGTTCAGTTTATGATTATGCTGTTTAAACACGGTAAATGAAAGAAGGCTTTGATTGCTATCTGATCGTAGTTAGGATGATAAAGAATTGGAAATTAATATTCTACAATCATGCAAAACTTGTACAGTGTTCCTTTTTTTCCTTCAGTGTAATTTTCCTATCTGAATCTTTATCGGCCTGTCAATTGTCTTCTGAAATCATATACCTTAATTTTGTGGAACACAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCGGAGCACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGAGAGAATTTTCATTCGCGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAGGAACGAAGTCATGCCTATATGTAAACTAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGACTATGGATTCGTTGAAAACACTTTTGGGTTCAGAATCGTTTGGTCTACTAAACTTATGATTGAATAGATCAAAGAATAACATCTAATCAGCATCAAGTTAGTGCACTATTTGGAAGATGTTATTTGTTTGAGATCGAAATTTGTTATGTTCTTTGTATAAATTTGGAATGTTTTTCTCTGTTTTGATTCCTCTCTTTTACCGACTTTTGATGCGCTAGCTGAGAATTTTGATGAAGCTCGGTTTCATATCAGACCTCTTTCATGCTGGATAAAAAGTATCACAGAAGATCAATGTTCGTTAAGGAATTATTGCCTCAATCATTATTGTAGGAAGGACATGGAATAGTGATTCCCTAGAGTTTAGTTCAATCGGTGGGGTGGAGGTCGAACCATTCACTTTTGGTATGGTAGTTATGCTTGGATTGTGCATTGATGAGAAATATGGGTGCCCCATAGCTCCAATAAAACTGTCAAATATTAGGCCATTGCTGATTCTGAAGTCTGTCTTGGTCTTGAAATTCTTATATTCATCTTCCAACTTCCCAATATTCCGATGAC GCCATCCCGGCTGCCATTGTTGAGACCTCCGACCGATCATGGCCAAGTGGTGGCGCTCCGCCGGAACGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCCCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAAATCCTTGAGAAAAACCCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCGGAGCACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGAGAGAATTTTCATTCGCGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAGGAACGAAGTCATGCCTATATGTAAACTAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGACTATGGATTCGTTGAAAACACTTTTGGGTTCAGAATCGTTTGGTCTACTAAACTTATGATTGAATAGATCAAAGAATAACATCTAATCAGCATCAAGTTAGTGCACTATTTGGAAGATGTTATTTGTTTGAGATCGAAATTTGTTATGTTCTTTGTATAAATTTGGAATGTTTTTCTCTGTTTTGATTCCTCTCTTTTACCGACTTTTGATGCGCTAGCTGAGAATTTTGATGAAGCTCGGTTTCATATCAGACCTCTTTCATGCTGGATAAAAAGTATCACAGAAGATCAATGTTCGTTAAGGAATTATTGCCTCAATCATTATTGTAGGAAGGACATGGAATAGTGATTCCCTAGAGTTTAGTTCAATCGGTGGGGTGGAGGTCGAACCATTCACTTTTGGTATGGTAGTTATGCTTGGATTGTGCATTGATGAGAAATATGGGTGCCCCATAGCTCCAATAAAACTGTCAAATATTAGGCCATTGCTGATTCTGAAGTCTGTCTTGGTCTTGAAATTCTTATATTCATCTTCCAACTTCCCAATATTCCGATGAC ATGGCCAAGTGGTGGCGCTCCGCCGGAACGAACCTTAGGTTGGCGGCGTTTTCAAGTGCTAGATCAGAATCGTGTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACGATCCAAGCAATACCAAGAGAGTGCAGCGGCAGCCGAATTTCGAGCAGAGATAGAGCCCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAAATCCTTGAGAAAAACCCCGTCCACCGATCGCCGTCGCGGAAGCATCTGCTCACTACAGAGCAAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTCAAGCTCCAGATCCGCGCTGGTTCCGGATCTTCAGTCCTTCTTGAATCAGGATCCATCCTTCCAGTCAAAATTCATAGGGATGAAGAGACCGGGAAGATTTTGAATATTGTATTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGACTTGCCCTGGTCTTCAGAAAGGAGGTCAACTGAACAGGATAAGAACTAGCCTGAAATATCTTTGCCCCGCGGAGCACATTCCTTCCAAGATTGAGGTGGATGTAAGTAATCTGGACATTGGGGAGAGAATTTTCATTCGCGACCTAGACGTCCATCCTTCTCTTAAGCTACTTAGCAGGAACGAAGTCATGCCTATATGTAAACTAGTCACAACAAACACGGAAACGGCAAACACAGAAATTTCAGAACCTTCATGA MAKWWRSAGTNLRLAAFSSARSESCPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRIPAVVFSQQILEKNPVHRSPSRKHLLTTEQKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPVKIHRDEETGKILNIVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLKYLCPAEHIPSKIEVDVSNLDIGERIFIRDLDVHPSLKLLSRNEVMPICKLVTTNTETANTEISEPS Homology
BLAST of CcUC02G030300 vs. NCBI nr
Match: XP_038902793.1 (50S ribosomal protein L25 [Benincasa hispida]) HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124 Identity = 232/253 (91.70%), Postives = 242/253 (95.65%), Query Frame = 0
BLAST of CcUC02G030300 vs. NCBI nr
Match: XP_023512718.1 (uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122 Identity = 224/253 (88.54%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of CcUC02G030300 vs. NCBI nr
Match: KAG7011163.1 (rplY [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448.4 bits (1152), Expect = 4.2e-122 Identity = 224/253 (88.54%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of CcUC02G030300 vs. NCBI nr
Match: XP_022971722.1 (uncharacterized protein LOC111470391 [Cucurbita maxima]) HSP 1 Score: 448.0 bits (1151), Expect = 5.5e-122 Identity = 225/253 (88.93%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of CcUC02G030300 vs. NCBI nr
Match: XP_022928099.1 (uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothetical protein SDJN03_30313, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447.6 bits (1150), Expect = 7.2e-122 Identity = 224/253 (88.54%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy Swiss-Prot
Match: Q73II9 (50S ribosomal protein L25 OS=Wolbachia pipientis wMel OX=163164 GN=rplY PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13 Identity = 52/187 (27.81%), Postives = 92/187 (49.20%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy Swiss-Prot
Match: C0R595 (50S ribosomal protein L25 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) OX=66084 GN=rplY PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13 Identity = 52/187 (27.81%), Postives = 92/187 (49.20%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy Swiss-Prot
Match: A5CF34 (50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=rplY PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13 Identity = 55/190 (28.95%), Postives = 94/190 (49.47%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy Swiss-Prot
Match: Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13 Identity = 51/194 (26.29%), Postives = 97/194 (50.00%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy Swiss-Prot
Match: B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13 Identity = 51/194 (26.29%), Postives = 97/194 (50.00%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy TrEMBL
Match: A0A6J1I2R7 (uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122 Identity = 225/253 (88.93%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy TrEMBL
Match: A0A6J1EJW5 (uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC111434985 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.5e-122 Identity = 224/253 (88.54%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy TrEMBL
Match: A0A1S3C6P2 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 7.3e-120 Identity = 221/253 (87.35%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy TrEMBL
Match: A0A0A0LJM8 (Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G295950 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.2e-119 Identity = 222/253 (87.75%), Postives = 235/253 (92.89%), Query Frame = 0
BLAST of CcUC02G030300 vs. ExPASy TrEMBL
Match: A0A6J1DRT2 (uncharacterized protein LOC111022615 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022615 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.5e-114 Identity = 214/245 (87.35%), Postives = 225/245 (91.84%), Query Frame = 0
BLAST of CcUC02G030300 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain ) HSP 1 Score: 292.7 bits (748), Expect = 2.8e-79 Identity = 149/241 (61.83%), Postives = 182/241 (75.52%), Query Frame = 0
BLAST of CcUC02G030300 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain ) HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38 Identity = 84/215 (39.07%), Postives = 133/215 (61.86%), Query Frame = 0
BLAST of CcUC02G030300 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain ) HSP 1 Score: 153.3 bits (386), Expect = 2.6e-37 Identity = 85/228 (37.28%), Postives = 135/228 (59.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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