CcUC02G030200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G030200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc finger CCCH domain-containing protein 62-like
Location	CicolChr02: 25536407 .. 25545257 (+)
RNA-Seq Expression	CcUC02G030200
Synteny	CcUC02G030200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATGGATGCCGCCGCAGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCCCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGTCAATCCTTACTCTCGCGGTTGCACCGCCATCACCCGCTGCCGCCGCTGATCTCTACACTTAAACGCCGTCGTATTCCCTTTCCCTAATTCCAAATTTGTAGATCATTCTTGATCTCATCTGTATTTGTCGATTTTAGGGTTTGGAGTTGGACAGCAGAGACGACATGTCGTTTTGGTTCTTTTCCCCTCTTCTTATTTTTATTATACTTTTTTATTCTTCCGCAATCTAGGGTTCGGAAAGCGGCGTCGTTTTGTTGGCTGAGGTATTATTATTTATTACTGTTATTTAATTATGATGATGTGTAGCTTGATATCTGAACCGGATTATATTAAATTCAAGTTCGTTTATTATTATTATTATTATTATTATTATTATTACGTAATTATATTTTAATCATATTTGATTCACGAATTACGCATAGTGTCGGTGGACGGTGGGTTTTCTTTCTTTTTTTTTTCCTTTTTTTAATTCTAGGTAAATTGTTGGTTAAATTATAGTTGAAGAAAGTTAGAATTTAATTTATTTATGGTTAGAATTTGGTAATTTAAAAAGCTTTAATAAATAGTTGTTATAATCAAGATTATTTTATGAAATTATATTCAATGTAAATAGTCTGTTATTATGACTGTGCGGCGGTGTCGGCATTTTCAAATTTCAGATCAGTAATTTTTCAATAAATATGGCCTTAAGAGATGGAAATTAATGGACGAATGAGGCGAATTTTGTCAAGGAAAGGAGTGGATTTATTTTGTTCCCAACTTTTAACTTAGGCCTTTCAAGTTTCAACATTCAAAATATGACTATTCGAATTAACCAATTGCGAGGGCTTGCACACCGATCTTCTTTGATATGCCAAGGAAACAAACTGTTTTTAACTTTTTTTTTTTTTTTAATTTGGTCAAAAATTCAAATATTTACGCATGAAATTTTGAGAACTTTTACGCATGAGAAAACAAAAAACGAAGGGCTTGTGTGATTCTTATTTCCTATTTCTATTTCTCCGTTTTTCCTATTTCTATTTCTTCGTTTTTAAGAAACAAATTTGTTTGATAACTGTTTTCGTTTTTTGTTTCTAAATTTTAAGAAACATTTTTCAAAAAATAAGCCAAAATTGAGAAACAACGAAATATAGTTTCTCCTGTTTTTATTTTTATTTTTATCATACCGTTCTTACAAATAATCATTTTTCTTTTTTAACTTTTCATATAATTTCCTTCTACCAGTCATGAGTTCAAATCTCACTTGATGTAATTTGTTTTGGACATTTTTATTTTTATTTTTCCAAGAATCTGTTTTTTCATTATTTTTATTTTTTCTTTATTAATTTTGTTATTTACAAAATAATTCTTCTATATTTATATTTTATTTTAATTTGAATTTTAAAAATTTTTTATATTTAGATTTATATATTATTTTAATTTTCAATATGATTTTTTTATATTTCAAATTTCAACTCCCAAGATGAGCACCTTTTCTTTTCTTTTATATTTGTTTCCCTCTTTTAGATTTTATTTATTTTCTTTATTAATTTTGCTATTTGCAAAAATAGTTATGGAATATTTTTATTTTTTTATCTTGAATTTTAAAATTCTTCAACATTTAGATTTATATATTATTTTAATTTTTTTTATATTTCAACTTTTGAGTATTAAATTTTGCAATATGTGTGTTTATATATTATTTTAATTCTAATATTTTTATTATATCCGAAACTGAGTAGAATTTTCCAATATATAAATTTTGCTCCATTGTAGACGTGAAGATGAAAGTTGAAAAGTTGTTTTAGATATTTAAAATTTAAGGATAAAGTATACACAAACTCTTCTAAATTGAGAGACTAAATTTGTAATATAAAATTTTTTCTAATGGAACATCTTTTTAGATATTAATGCAGTGGGAATTATATGAAAGGAAATCGCCCTTTGGGGTCTTTATATTTAAATAATAGCGTTGTTAGGTGTAAATAGAAAAAATAATTTTCAAAATAATTCTTCCAGGGGCACATGCATATTTATTATAAGAATTATGACAAACGGTTATATGCATAATTTATTATTGCGAGAGGAAAAAAAAAAAAAAAAAAATTGAAGCACATGGCTAGAAATACTTGATAATTTTGAAAAATAGTCACACGGTAACTTTCACTAAATTTGGCCAACTTGAAAAAATATACCCTTATTTTTAAAATACCATATCCCCAAACTTCCATAGATGTTACTTTTAGAGTAAAAATCTTTTAGAATTTTAGACATAAATGAGGACTTAGAACGATGTGGCTATAAGTATTGATGTTTGTTTGTAGAAATAGTCTTCACTCTTAGAAGTAGTTCAAGACAAGAAACGACGACGTTGTCTAATCGCAAAGAAAAAATGTAAGAAAATAGTGGAGATATACAGTATTGAATATGTATTTCAAATCATGGTCTAAACCTCAAGTCTAAGGCGTTACATAATTGGTCTAAATTTGTTGAGACTCAGTACAATAGGATGATTAAAGTTTTCCACCTGAGCTACTTTTTCATAAATTTTTTTACTAAAGATGTAGGACATCAATTTTCATGTGTTGGCCCCCGGACAAAACTCTCTAATGTAGAATGTGCTTTTAACTTTCAAATTGGCATACTGGTTGTATTTATGGAATGAATGTGTATTAACTAAATCAATCCAATTTCTTCTGCCATGGTAGACTTTGTATAAGTTTCTTCAAAGCTCTATGGCAGATAGTCTTTGCTTCAGAGCTTCTTCACAATTCCATTCCACAAAAACCAATCTTTTTCTGCTGCGATCCAAGCTACCAGTAACTATCTACCAACGATAAGTTAATCATGCCAAAAGAAGTGGATTATATATGCCAATGCTGCCTATTTTGGTATTGGCAAAACCCTCTCCTAATAGTAAATACCTAACGACAATTCTTGGTCGAAACTTTGCATTGAGATACAATTCGAAAAGTAGGTAGATCACAAGAAGTACCACACATGAATAACAATGTTATTGATAAGAGTATAAACAAATTAAACAGAAGTATAAGAGAGAGATAACACACAGAAATGGTAACTCAGTTTGGTGTAACTACACCTACGTCTGGAAGACTTTACGCCTGAATGAAAAGAGTTATAACCAATGTTCACAAGACACTTCTTTTCAAATACAAAATTTAACTAAGAAGTATAATGTGCAATAACTAGTGAGCGATTTAGGCTCCCCTAAATATTGTGCTCCTTATGGAAGAGTCAGCAGATTGGGCTCCCCCTTAATTTGATGCTACTCAACAATAACTCCAATCTAGAGTTGAATCATCATCCAACTAAAAAGTAATGCACCAAACCGAATTTGATGTCAAGAATGATCAGTATATCGTCAACAATACATGATCTATTTCTGACTAGCAAACTTGAGCAGATAACCACATATCTCAAAACTTCTACAATGCTCACGTTCATTCACACAAAAATGGTTTAACCTCGAAAGGCACAACACCATGAAAAAATATATATAACACAAATGGAAAAAATCCATCATCACCGAGGCAGGAGATCGAGACCAATTAAAGGTCAAGCCCAAAACACGTGCAACCAAAAAAGGAAAGAATATGTAGCAAATACGACATGGATAAAATCAAAGACAAGCCAAGAGACAATCGGAATAAAAGTAAATATTAATAGTCAACACCACTATAACACATTTTTCTATAACTTCTTTTTTTCTCCAATGCCTTTATCGTTGGATAATTGCCTAAATCGTTGTAGTTCAAACACACCCCAAATAGCACAAACTCACCAAACTAACCCGCCTGAAAAATACCCCCAAGTCATCTAATCATACTTCGATTTCCATTAACTTATCCAATCTAACCCTTAAAAAACATGTCAAATATAATTCACTAAAACTAATTCTCTAATTGCAAGATAGTAATATCATCAAGCATACACTATGACACTTACTGAAGAACTTTAACTCACCCGTACCGATTACCAAACCGTATCGTGGTTATAACACTTTAAAAAGTCATGCAAACTAAAATGCAATACACTTCATAATGATATTATAACATTAAAGAAATCATCTATACCTAGTTATAAGAGGGACCTTTTTGTGTGCTTGTCATTGTAGGATCAAAATAAGTTCACTTCAAAAAAAAAAAAAAAAACGACCAACTATTAGTAACAAACATTTTGATTTTATTTTATTTTATTTTTGAGTTCAACAAAATTTGATATCTTGATCTATATATTTTAACTAGTTAAACTATGCTCAAGTTTACATTTGATGATCTAATAAGTATAAACATGATAAAATTAGTCAATAAATTTTAGTCAACTCATAAAAGATGAAATGAAATAACAAAATAAAATTAAAGTTAAAACGAAAGAAAAAAGAACGGTCACGAATTACCGAAATCCCCTTCAATTCACAATATTATAATAGGATTATTTAATAGATTGACTTAACCAATTGAACCAAAATGTTATTTGACTGATCCTTCAAACTAATGTTTTTATTACCCATTTTGCAAATATATTTCCAGACCATCATATATTTGTAATTAGTTTCTAAACCATCTTATTTTTTTTCATATTTTTTAAAACTACATTATTCTTTAAATTAAACAAAAAAGGTTGAAAAGCTTTGTTTTGATAAAAGGGTCAAATTTTATTTTTCTAATAAACAGTTAAAGTGATTCGTACAAAAATCCCATTATAATATAATTACCAAAGTATGTTTCCTTTGCAAGGAAATGCCTAAAACGGGTAGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTCTGGCGACGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAACGATGACAACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGGCAGCGACAATGACTCTGACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGGTAATTTCGGATCGTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTCGCCATTATGTTGATATTTGAGCTCAAGGTCGAATCGTCAATTGAAAGAATGAAAACGATGATTTCTCTGAAGGTTAAGAAGTGGACAGGTTTTTTGAGAAATTCATATGGTATTTGATCTCTTAGAAGAAGAGCAATGAATTTATCAAATTTGTAACATATTCCGTTGCAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAACGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGTACTTGGATTCTTGATCTTGAAACTCAAGATACAAATCTTAATATTGCGATCAATCAAGATACTTACAATTGTTAGTACTTGTTCATGTTGGGAAACTGCTATGTACTCATCTATGTAGTTTTTATATATTTGTTTAGAGTATAATTCTGTTTTTATTGGTCCTTTTATCTTTGAATTTCTTTCCTTTTATAATTAGTTACCTTATTATATTTACCCATTATTGGGTTATTGGAAAAATAAGGAAATAATTTCTCTAAAATCAGTATGATATCATTATTTCCTCTGCAGTTAATATTAATTCTAGTTGTTGGACCTTCTATAAATTTCCAAGCCTACAAGTGAGGTGATTGTTGAATTGTGGATATAACTATAATAATGTAACTCATAAGGTTAAGTGTCCACCTGGGCATAAGCCTTAATGGCTGCTTTGCTTTTGGTTTAACCCAAAATAGCTAATACCAATGGAGATATTATCCTTCACTTATATCTCAGGATCTTTCTCTTGTTTTGCCAATGTGAGACTTTGGTCGCATTCCCAACAATCCTCTATCAAACAGAGAACCATTGAGCCTCCCCCAAATAGTTATCTATCCATCTGGCTCTTATCTAAATCAATTCCTCTTCACCAAAGCACACCACCTATTAGGTGATCTCAACCACGAATCCCACCATGACTGCATCTTCTGAAGCTCACTACTTCTTTGTTCGATACCCTAGGATTCTACCAACATGATTAAGAAAAGGGGCACACTCTATTATTACGTTAAATCACCACTCAACCCAAAAGCTTAAGTTTCTTAGTTACATTAAATTTAATTAAATAAAAAATTCAGCATTAACCTCTATGGAAGTCTTTTGATAGTAGAGAAGTGACTAGCGAGTATTTTAGTGAATGCTGATGGGTATCCATTATGTTCCTTTGGATTTGAATAGATGGAAAGTAGAAGAGAAGATTTTAGACAAATGGTATGTTGAGAAATTTTCACATCCGTTTAAGGATTCTTTTTTTTTTCCTTTTCCTGGTTTATCACTGGTTTCTGGAGTTTTTATCTTCCAAGAGTTCTGTATTGAAGCATATCAAACCAGAAGGCAGCAACATTATTTTCTTAATAATATATATTTTTTTTCACATTTTTTATGACCCGATATTGTGTTCCATTTGTTGCTGACAAAATTCTTGATATCTGATATGTATCCTATGAATGCTCTTCTGGTACAACTACTACTAACAAAACGTATTTGCTTTTTTTCCCCCTTCCATCTCAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTAATCGCTTGTTCATTTGTCATAGCATTTTCTTTGATCTTTGATCTCTTTTAATGGCTGTAATTAATCAATTAAAACATCAATGCAGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGCAAAGTACCCAAACAACTTACTCTTCTACCACTATTCTTGTGCTTGATATTTTGAATTATACTTCTACTTCTTGTAGTTTACTTTTTATTAGGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCACGCAAACAGCAGCATACTTTTACTGTAAGGCTTCTTTCTGCTCAAGGAATCATTTTTTCCCATATAGTAATTCATATCGGTTGTGGATTTTTTGCATCATATGTCGCAATATGGTCAATTTGTTTGCATCTAATATTCACTGCAATGATTATGTAGCAGTCAGTAAGTTTTCTCCTTTCTTTGTTCTTTCTCTTATATATTTATTATGTATTTTTTCATTTTGCGACTGATATTTCCAACATTTGTGACTATAATGTACTAGGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTTGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGGTAAGTACTCATTTACATAAGTATATTTTATTTTCATACAAAAGCATCCGCGTTAATAGTGGTTGTCCTGTGGATGAAAATTTTAAATCAAATTGATTTTTTTTGTTAGTGAAGTGCGCATATAAATATGAATATAGTAACAGAACAATGTTCATTGTGTCTCACATTCTTAATCCTTAAACGAGTTAACTTCAAGACCTGCCTCCTTTCGAAATTTATATCATAAAGCTAAAGTTCTACCAAATATGATTGTAAGAGTTTGTATCGTCAGGCCTTCTCTCCAATGGACAATAAATGAAACCTAATGACCTATGTTGTTGTATTTTATTAATTATTTGTCTGTTCTGTTACTTCCTCTTTAGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCCGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGTACTAGTTCTTACCCTGACTAGCCATAAAAACAGAAAAGGACTAGCCATAAAAACAGAAAAGGAGCTTACTGCAATTGGATAAATGTTACCATATTTTTCCATTGCAATTAACAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAACAGTAAAGAGAGCCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAGGTCCCTAGTATTTTTTTGAATTTAAAGTTTATTCTAACTTCCTAGTTACACAATGACAAGGTAGGACGGTTCTGGTTACCTCCAAGTTTCGCACGTGACCCGAGCTAAATGGTAAAAGAGAAAATAGAGGAGCGAATGGGATGACAATGTGGGGGGAAACAAGAGGATGGTTGACATTCATCAATGATCAGTTCTTTTAAAATATTATGTTACAGATTAGGAAGATAGAATTCAAATCTACTATCCATAAGAGATTAGTATTTGAGTTTAAGTTGTGTTCAAAATCAGCATGATTACAGTAGTAGAAAGCTTTTAAAAGCCAATGAGGCATTTAGGCTTGTTCGTATTTGTCATTAGCCTATTATAACTGAATCTGCCTTTGCTTTCATTTTATTGTGGTAAAATACGGTTTTAAACGAACTTAGTTTGATGTAGA

mRNA sequence

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATGGATGCCGCCGCAGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCCCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGGTTTGGAGTTGGACAGCAGAGACGACATGTCGTTTTGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTCTGGCGACGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAACGATGACAACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGGCAGCGACAATGACTCTGACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAACGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCACGCAAACAGCAGCATACTTTTACTGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTTGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCCGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAACAGTAAAGAGAGCCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAGGTCCCTAGTATTTTTTTGAATTTAAAGTTTATTCTAACTTCCTAGTTACACAATGACAAGGTAGGACGGTTCTGGTTACCTCCAAGTTTCGCACGTGACCCGAGCTAAATGGTAAAAGAGAAAATAGAGGAGCGAATGGGATGACAATGTGGGGGGAAACAAGAGGATGGTTGACATTCATCAATGATCAGTTCTTTTAAAATATTATGTTACAGATTAGGAAGATAGAATTCAAATCTACTATCCATAAGAGATTAGTATTTGAGTTTAAGTTGTGTTCAAAATCAGCATGATTACAGTAGTAGAAAGCTTTTAAAAGCCAATGAGGCATTTAGGCTTGTTCGTATTTGTCATTAGCCTATTATAACTGAATCTGCCTTTGCTTTCATTTTATTGTGGTAAAATACGGTTTTAAACGAACTTAGTTTGATGTAGA

Coding sequence (CDS)

ATGGCTTCCAAATTCCTCCTCCTCCTCCTCTTCACTATCCTCCTCTTCATTTCTTCCTCTTCCGCCCACCTCTCCGTCGACACCTCTCTCAAGCTCATGACCGACGCCCTCGAATGGCCCACCACCACCTCCCTCATGGATGCCGCCGCAGACGACATCCACGACGATGAACTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATTTCCTACGGCGCCCTTGCCGCCAACCGGATCCCTTGCCCGCCCCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCTGGTTTGGAGTTGGACAGCAGAGACGACATGTCGTTTTGCAAAAGAAGAGTCATTTGTATCTCGTCGTCGTCGGACGACGACATTTCCTCTGGCGACGACGAAGAGGAATCAGAGGAGTATGATGATGAAGACGATGACGAAGGGGATTCGGAAGAGGAGTTCGATGATAAAAACGATGACAACGGGGATTCCGAAGAGGAGTTTGATGACAAAGACGATGTCGAAACGGAATCGGAAGAGGAGTTTGATAATGAAGGCAGCGACAATGACTCTGACGAAGTTCTATCCGAGCGAGTCATCCGCTTCCTTAAAGAGAACAAAAATTTGGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAACGGGGACTAAAGCCGTCTGTATTCAAAGAGTCAAGGATCATTGGAGGATGAAAGATGGAAATGGTGAAGCTCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTCTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGTCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTAAAGGAGAGCTATGGTGCACGCAAACAGCAGCATACTTTTACTGTCGAGGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTTGTTAAGGGACGAAATCTCTACAAACTAAGAACTTTCAGACGGCGTTGGAATGATGAAGCTCAAAGAGTTCAAGTTCTTGCCGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTTTACGAGCAATGCAGAAAAAGAAAAGAAAACTTCAAACCGGAGGATTTGCAAAGAATCAAGGACATGTTCATCTTGCAAGACAAGCTCTGAACAGTAAAGAGAGCCGCAAAAGGATGCCATCAAGGGACAATAACAATGCTGTACGTAGACATCCAACATAG

Protein sequence

MASKFLLLLLFTILLFISSSSAHLSVDTSLKLMTDALEWPTTTSLMDAAADDIHDDELDLQQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPGLELDSRDDMSFCKRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDDVETESEEEFDNEGSDNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTKAVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWNDEAQRVQVLAEKHKRGAAARGLRAMQKKKRKLQTGGFAKNQGHVHLARQALNSKESRKRMPSRDNNNAVRRHPT

Homology

[Close]

BLAST of CcUC02G030200 vs. NCBI nr
Match: XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 517.7 bits (1332), Expect = 9.7e-143
Identity = 283/309 (91.59%), Postives = 293/309 (94.82%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KRRVICISSSSDDDIS GDDEE+SEEYDD+DD + +SEEEFDD++DD+GDSEEEFD KDD
Sbjct: 6   KRRVICISSSSDDDISCGDDEEKSEEYDDQDDADWESEEEFDDEDDDDGDSEEEFDYKDD 65

Query: 182 VETESEEEFDNEGSDNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTKA 241
           VE ESEEEFDNE SDND DEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTKA
Sbjct: 66  VEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKA 125

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 301
           VCIQRV++HWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI
Sbjct: 126 VCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 185

Query: 302 GKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGA KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRR WN
Sbjct: 186 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWN 245

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRKL-QTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQVLAEKHKRGAAARGLRAMQKKKRK  QT G AKNQGHVHLARQ LNSKESRKR
Sbjct: 246 DEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQGLNSKESRKR 305

Query: 422 MPSRDNNNA 430
           MPSRD NNA
Sbjct: 306 MPSRDYNNA 314

[Close]

BLAST of CcUC02G030200 vs. NCBI nr
Match: KGN62051.1 (hypothetical protein Csa_006128 [Cucumis sativus])

HSP 1 Score: 461.1 bits (1185), Expect = 1.1e-125
Identity = 258/315 (81.90%), Postives = 270/315 (85.71%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSS    SS  DEEESEEYDDEDD  GDSEEEFDDK+DD G           
Sbjct: 7   KRTVICISSSS----SSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEG----------- 66

Query: 182 VETESEEEFDNEGSDNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTKA 241
              ES EEFDNE SDN  DEVLS+RVIRFLKENKNLDSLTLNDCKAYLRE+RLRI GTKA
Sbjct: 67  ---ESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKA 126

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 301
           VCIQRVK+HWR+K+GNGE  YP+SSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI
Sbjct: 127 VCIQRVKEHWRLKNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 186

Query: 302 GKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGA KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR  WN
Sbjct: 187 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWN 246

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQ LAEKH+RG AARGLRAMQKKKRK +QT G A+NQGHVHLARQ L SKE R+R
Sbjct: 247 DEAERVQALAEKHRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQR 303

Query: 422 MPSRDNNNAVRRHPT 436
           MPSRDNNN VRRH T
Sbjct: 307 MPSRDNNNVVRRHST 303

[Close]

BLAST of CcUC02G030200 vs. NCBI nr
Match: XP_016902184.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 3.5e-124
Identity = 260/311 (83.60%), Postives = 273/311 (87.78%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 95

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAV 431
           RMPSRDNNNA+
Sbjct: 336 RMPSRDNNNAI 335

[Close]

BLAST of CcUC02G030200 vs. NCBI nr
Match: XP_016902186.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X3 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 5.9e-124
Identity = 261/312 (83.65%), Postives = 273/312 (87.50%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 95

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 336 RMPSRDNNNARR 336

[Close]

BLAST of CcUC02G030200 vs. NCBI nr
Match: KAA0045864.1 (zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa] >TYK13724.1 zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 455.3 bits (1170), Expect = 5.9e-124
Identity = 261/312 (83.65%), Postives = 273/312 (87.50%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 7   KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 66

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 67  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 126

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 127 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 186

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 187 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 246

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 247 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 306

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 307 RMPSRDNNNAGR 307

[Close]

BLAST of CcUC02G030200 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 3.5e-34
Identity = 120/314 (38.22%), Postives = 175/314 (55.73%), Query Frame = 0


Query: 132 SDDDISSGDDEEESEE---YDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDDVETE--- 191
           S++++ S D+EEE  E   + +EDD E  S     D +  + D +  FD   D + E   
Sbjct: 28  SEEEVESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYD-DPTFDPAADGDLEVDA 87

Query: 192 -----------SEEEFDNEGS---DNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRE 251
                      S    D +GS       +E+    ++  L  +  L+ L + +CKAYLR 
Sbjct: 88  VLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECKAYLRM 147

Query: 252 NRLRITGTKAVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKF 311
           ++LR++G K V + R++    +K   GE  YP SSFV+NC GD C+GD V+F Q +Y + 
Sbjct: 148 HKLRLSGNKEVLLTRIRGQIEVKT-MGEVKYPVSSFVLNCQGDSCKGDVVVFEQNIYKRK 207

Query: 312 DKVTR--HGGLIGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRN 371
               R   G L G+RT AGR++KESYG +KQQHTFT+E+LWSRG +  PPL+PLL+KGRN
Sbjct: 208 KGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLLIKGRN 267

Query: 372 LYKLRTFRRRWNDEAQRVQVLAEKHKRGAAARGLRAMQ-KKKRKLQTGGFAKNQGHVHLA 423
           LYK +T R+ W DE +R + L EKH RG  AR  R ++ K K   +     +N+ +    
Sbjct: 268 LYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNRNKENKSKG 327

[Close]

BLAST of CcUC02G030200 vs. ExPASy Swiss-Prot
Match: Q9FHA6 (Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-20
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 2   ASKFLLLLLFTILLFIS-SSSAHLSVDTSLKLMTDALEWPTTTSLMDAAADDIHDDELDL 61
           AS   LLL+ ++L FIS   S  LS + SL L+ D  +WP + S      D     E+  
Sbjct: 3   ASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTE 62

Query: 62  QQD---PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGP 109
           + D    RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGP
Sbjct: 63  EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGP 113

[Close]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL
Match: A0A0A0LQ19 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 5.2e-126
Identity = 258/315 (81.90%), Postives = 270/315 (85.71%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSS    SS  DEEESEEYDDEDD  GDSEEEFDDK+DD G           
Sbjct: 7   KRTVICISSSS----SSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEG----------- 66

Query: 182 VETESEEEFDNEGSDNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTKA 241
              ES EEFDNE SDN  DEVLS+RVIRFLKENKNLDSLTLNDCKAYLRE+RLRI GTKA
Sbjct: 67  ---ESGEEFDNEESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKA 126

Query: 242 VCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 301
           VCIQRVK+HWR+K+GNGE  YP+SSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI
Sbjct: 127 VCIQRVKEHWRLKNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLI 186

Query: 302 GKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWN 361
           GKRTVAGRVVKESYGA KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR  WN
Sbjct: 187 GKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWN 246

Query: 362 DEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRKR 421
           DEA+RVQ LAEKH+RG AARGLRAMQKKKRK +QT G A+NQGHVHLARQ L SKE R+R
Sbjct: 247 DEAERVQALAEKHRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQR 303

Query: 422 MPSRDNNNAVRRHPT 436
           MPSRDNNN VRRH T
Sbjct: 307 MPSRDNNNVVRRHST 303

[Close]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL
Match: A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.7e-124
Identity = 260/311 (83.60%), Postives = 273/311 (87.78%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 95

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAV 431
           RMPSRDNNNA+
Sbjct: 336 RMPSRDNNNAI 335

[Close]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL
Match: A0A5A7TS31 (Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002520 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.9e-124
Identity = 261/312 (83.65%), Postives = 273/312 (87.50%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 7   KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 66

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 67  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 126

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 127 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 186

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 187 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 246

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 247 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 306

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 307 RMPSRDNNNAGR 307

[Close]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL
Match: A0A1S4E1T3 (zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.9e-124
Identity = 261/312 (83.65%), Postives = 273/312 (87.50%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 95

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVR 432
           RMPSRDNNNA R
Sbjct: 336 RMPSRDNNNARR 336

[Close]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL
Match: A0A1S4E2I3 (zinc finger CCCH domain-containing protein 62-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 4.9e-124
Identity = 263/316 (83.23%), Postives = 275/316 (87.03%), Query Frame = 0


Query: 122 KRRVICISSSSDDDISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDD 181
           KR VICISSSSD      DDEEES EYDDEDD  GDSEEEF D++D + +SEE     DD
Sbjct: 36  KRTVICISSSSD------DDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEE-----DD 95

Query: 182 VETESEEEFDNEGSDNDSDE-VLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTK 241
            E ES EEFD+E SDN  DE VLS+RVIRFLKENKNLDSLTLNDCKAYLRENRLRI GTK
Sbjct: 96  DEGESGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTK 155

Query: 242 AVCIQRVKDHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGL 301
           AVCIQRVK+HWR+KDGNGE  YPRSSFVVNC  DVCRGDTVLFTQKVYAKFDKVTRHGGL
Sbjct: 156 AVCIQRVKEHWRLKDGNGEVQYPRSSFVVNC--DVCRGDTVLFTQKVYAKFDKVTRHGGL 215

Query: 302 IGKRTVAGRVVKESYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRW 361
           IGKRTVAGRVVKESYGA KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRR W
Sbjct: 216 IGKRTVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLW 275

Query: 362 NDEAQRVQVLAEKHKRGAAARGLRAMQKKKRK-LQTGGFAKNQGHVHLARQALNSKESRK 421
           NDEA+RVQVLAEKH+RGAAAR LRAMQKKKRK +QT G AKNQGHVHLARQ L SKE R+
Sbjct: 276 NDEAERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQ 335

Query: 422 RMPSRDNNNAVRRHPT 436
           RMPSRDNNNAVRRH T
Sbjct: 336 RMPSRDNNNAVRRHST 338

[Close]

BLAST of CcUC02G030200 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-62
Identity = 149/306 (48.69%), Postives = 205/306 (66.99%), Query Frame = 0


Query: 135 DISSGDDEEESEEYDDEDDDEGDSEEEFDDKNDDNGDSEEEFDDKDDVETESE-EEFDNE 194
           D+ S ++EEE + + DE++ +   EEE +D N    DS+   DD D  E++ E +E   +
Sbjct: 10  DLCSSEEEEE-DVFGDENNYDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVK 69

Query: 195 GSDNDSDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRITGTKAVCIQRVKDHWRM 254
           G ++D DE   ++V R L    +L S+ + +CKAYLR++ LR++GTK VCI R+ +HWR+
Sbjct: 70  GDNDDGDE--DDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRI 129

Query: 255 KDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 314
           KDG GEA YP+SSF +NC GDVC+GD VLFTQKV+ K++K+ + G ++G+RTVAG+VVKE
Sbjct: 130 KDGTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKE 189

Query: 315 SYGARKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRRWNDEAQRVQVLAEK 374
           SYG  KQQHTFT+EVLW  G +KLPPLYPLLVKGRNLY+L T R+RW +E  RV+VL EK
Sbjct: 190 SYGTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEK 249

Query: 375 HKRGAAARGLRAMQKKKRKLQTG-----GFAKNQGHVHLARQALNSK-ESRKRMPSRDNN 434
           H RGAAAR +     ++RK+++G     G  +  GHV    Q    K E  + +  R   
Sbjct: 250 HNRGAAARKV----MRERKIKSGYVLKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQ 308

[Close]

BLAST of CcUC02G030200 vs. TAIR 10
Match: AT5G67070.1 (ralf-like 34 )

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-22
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 2   ASKFLLLLLFTILLFIS-SSSAHLSVDTSLKLMTDALEWPTTTSLMDAAADDIHDDELDL 61
           AS   LLL+ ++L FIS   S  LS + SL L+ D  +WP + S      D     E+  
Sbjct: 3   ASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTE 62

Query: 62  QQD---PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGP 109
           + D    RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGP
Sbjct: 63  EDDGVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGP 113

The following BLAST results are available for this feature:

BLAST of CcUC02G030200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902878.1	9.7e-143	91.59	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]
KGN62051.1	1.1e-125	81.90	hypothetical protein Csa_006128 [Cucumis sativus]	[more]
XP_016902184.1	3.5e-124	83.60	PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumi...	[more]
XP_016902186.1	5.9e-124	83.65	PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X3 [Cucumi...	[more]
KAA0045864.1	5.9e-124	83.65	zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo var....	[more]

BLAST of CcUC02G030200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	3.5e-34	38.22	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FHA6	1.3e-20	51.35	Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1	[more]

BLAST of CcUC02G030200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ19	5.2e-126	81.90	SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV...	[more]
A0A1S4E1S9	1.7e-124	83.60	zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5A7TS31	2.9e-124	83.65	Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S4E1T3	2.9e-124	83.65	zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX...	[more]
A0A1S4E2I3	4.9e-124	83.23	zinc finger CCCH domain-containing protein 62-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of CcUC02G030200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	1.8e-62	48.69	SAP domain-containing protein	[more]
AT5G67070.1	9.1e-22	51.35	ralf-like 34	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 65..103 e-value: 1.2E-7 score: 32.5
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 217..251 e-value: 1.2E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..201
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 122..431
None	No IPR available	PANTHER	PTHR35323:SF2	SAP DOMAIN-CONTAINING PROTEIN	coord: 122..431

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G030200.1	CcUC02G030200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process