CcUC02G030020 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTGAGCTGATCTCCGTTATGGCCTCTTCCTCCCGTCACTGGCGAAACGACGTCGTTAAACGACCCCGTAAAGTGTCGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAGCAAAAACTTGTAAGCAAAAGTAAACTATATATATCTAAGTCTCTTCTTATTTGGCTTCTTTTTAATTAAACTCTAAATTGTGGGTTTTCTTTACTTTTTTATGTTTAGGAAATTCCAAAAAAGTTTGTTAGAGAATATGAGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCCAAGAGTGGAATGTGGGATTGACAAAAAGTAATAATGGAAAAAGGAGTGTGGTTTCATAATGGTTGGCAAAACTTTGTAGAATTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAGTATCCAGTTAAAAGCATTCATCTTAATGAAGCCAAGGATAAGGTGAAAATGGAAACATATTTTGATGATGATCTTGACCTAGGTATGTCTTTTATTTATTTATTTTTTATTTATTTTTTTTTTTTTTGGACTATGGATTTTTTCATTTTAGTTTTTAAAAATTTTAAAATATCAAATTTAATTTTTTTCAATAAAAAAAAAAAGAAAGAAAAAAACATGTCAAGATACAATTAGGTTTAGTACTTTAATCTTCACCATGTTTAACTTAACCCCTTTAATTTATTTATTTATTATTATTTTTTTTTTTTTGAAAAAACCATTTCGATCATGGTTGGTTTTAACACCCACGCATGTATTTGAGCAAAATAGTTAATGCAAATACCAAATTGGATTTGAATTATTTAGATATTTGGTAACCATTAATTTCGATTTTAATTTTTAGCTTTTTGAAGTTTATGCATGTTTAATTCCTAAGTTTTTTTTTCATAATTTTCACTTTTATCAAAGCAACACGTCAACTTTGAGTCAAAATCTAAAAACAATTAACAAATTTTTTAAAACTATTTGTTTTTCAAAACTTTGACTAGATTTTTTAGAATATTAATAGAAAATAGTAGACAATATAACCAAAGAATTTTGAGGTGAAAATAAAATTTGTAGGTTTAATTTTTAAAAAAAAAAACTAAATGATTATCAAACGATGTGTTATAGTATCTCATTTTCATTTTGTAGATTTCAAAGTTGGAAAAATTAGCTTGGATGCCAGAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGATAAATGCTACCGCTTTTCAATCCAGCACTTTGAATCCTTCTTTCATCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATGTCTTGTAAGAAAATTTAACTTCATTTTTTCTGCAATAAAAAACGTAGTATTTATATGAATTTTGACTCACTTTTGAAAAAAGAAATGTTTTAAAAAATTAAAAAAAAAAAACTACCGAAAATAATTATAAATATAGCAAAATTTTATTTTGTATATGTGATAGTCTGCGATAGACCCAGATAGACATAAATAAATGTCTATTTAGGTCTATCGCAATTAAAAGTAAAATTTTGCTATATTTATAAATAGTTTGATATTTTTTTATTTATAATAATTTTCCAAAAAATATATTCTTGTTCAAGCACATTTTCCAATTTTCAAGATTCCTTTTCTTATGAATTTTTTTTTCTTAAACATATTCAAAATATATGGTTGTTTTGATATATTTCTAATAAATTATCAAAAACAATATTCATATAAAATAATTTTTTTTCAAATATAGCAAAAGAAATTAAAATATTTATAAATATAGCAAAATTTACTGTATATCTATGATATAAACTACTATCTGTATCATGATAGACTGTGTATTTTGCTATTAGTTGTAAATATTTTTATCAATTTTACCATTTAAGATTATTTCTCTATGAAAAAATCCTCAATGATAAGTTTCTAAAACAACAATTATATATTTTTAATATGTTTTAGAAAAAATAATATTAATAAAAAATAATTAATCAAATAGTTTTAATAAATCTTAAAATAAACTAACGAGTATGGACTAAAATTGGATATTTAAAAAATATAAGACCGAAATGAAATGAAAATTTTTAATTTAATTAATTAATTAATTTATTTTTTATTATTATTATTATTTTTTGGGTGGAAAAGAATGTACCAAAAAGCTTTTCAGAGATGCATCTAGAAGAGCCCACAGGGATCATTCTCCAAGTTTCGGATGGAAGAATGTGGAGCGCTCGTTGTGGTTTATTGGACTCCTACAAAGCAAAGGATGACGGACTTTAGATGTGGTTTGAAGAATTTTGTTCGAGACAATAACTTAAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTACGTAA GCTGAGCTGATCTCCGTTATGGCCTCTTCCTCCCGTCACTGGCGAAACGACGTCGTTAAACGACCCCGTAAAGTGTCGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAGCAAAAACTTGAAATTCCAAAAAAGTTTGTTAGAGAATATGAGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCCAAGAGTGGAATGTGGGATTGACAAAAAAATTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAGTATCCAGTTAAAAGCATTCATCTTAATGAAGCCAAGGATAAGGTGAAAATGGAAACATATTTTGATGATGATCTTGACCTAGTTGGAAAAATTAGCTTGGATGCCAGAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGATAAATGCTACCGCTTTTCAATCCAGCACTTTGAATCCTTCTTTCATCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATGTCTTAAGAGCCCACAGGGATCATTCTCCAAGTTTCGGATGGAAGAATGTGGAGCGCTCGTTGTGGTTTATTGGACTCCTACAAAGCAAAGGATGACGGACTTTAGATGTGGTTTGAAGAATTTTGTTCGAGACAATAACTTAAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTACGTAA GCTGAGCTGATCTCCGTTATGGCCTCTTCCTCCCGTCACTGGCGAAACGACGTCGTTAAACGACCCCGTAAAGTGTCGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAGCAAAAACTTGAAATTCCAAAAAAGTTTGTTAGAGAATATGAGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCCAAGAGTGGAATGTGGGATTGACAAAAAAATTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAGTATCCAGTTAAAAGCATTCATCTTAATGAAGCCAAGGATAAGGTGAAAATGGAAACATATTTTGATGATGATCTTGACCTAGTTGGAAAAATTAGCTTGGATGCCAGAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGATAAATGCTACCGCTTTTCAATCCAGCACTTTGAATCCTTCTTTCATCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATGTCTTAAGAGCCCACAGGGATCATTCTCCAAGTTTCGGATGGAAGAATGTGGAGCGCTCGTTGTGGTTTATTGGACTCCTACAAAGCAAAGGATGACGGACTTTAGATGTGGTTTGAAGAATTTTGTTCGAGACAATAACTTAAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTACGTAA AELISVMASSSRHWRNDVVKRPRKVSDNPHFFKVVLADALEEQKLEIPKKFVREYEVKALLNDQICLKVADGQEWNVGLTKKFYSVKLGYFLVFKYQNQSSSFYVLIFDLTAMEIEYPVKSIHLNEAKDKVKMETYFDDDLDLVGKISLDARKPMNSGQKPPSTGSQRARAMINATAFQSSTLNPSFISKIWPSHIHLGKCLKSPQGSFSKFRMEECGALVVVYWTPTKQRMTDFRCGLKNFVRDNNLKVGDFCVFEMIT Homology
BLAST of CcUC02G030020 vs. NCBI nr
Match: XP_038900379.1 (B3 domain-containing transcription factor VRN1-like [Benincasa hispida]) HSP 1 Score: 335.9 bits (860), Expect = 3.1e-88 Identity = 181/286 (63.29%), Postives = 210/286 (73.43%), Query Frame = 0
BLAST of CcUC02G030020 vs. NCBI nr
Match: XP_008457959.1 (PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumis melo]) HSP 1 Score: 313.2 bits (801), Expect = 2.2e-81 Identity = 171/288 (59.38%), Postives = 202/288 (70.14%), Query Frame = 0
BLAST of CcUC02G030020 vs. NCBI nr
Match: XP_031736563.1 (B3 domain-containing transcription factor VRN1-like [Cucumis sativus]) HSP 1 Score: 307.0 bits (785), Expect = 1.6e-79 Identity = 168/288 (58.33%), Postives = 197/288 (68.40%), Query Frame = 0
BLAST of CcUC02G030020 vs. NCBI nr
Match: XP_016902156.1 (PREDICTED: uncharacterized protein LOC103497524 isoform X1 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 5.6e-77 Identity = 171/326 (52.45%), Postives = 202/326 (61.96%), Query Frame = 0
BLAST of CcUC02G030020 vs. NCBI nr
Match: KAE8651937.1 (hypothetical protein Csa_005915 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 2.6e-66 Identity = 144/248 (58.06%), Postives = 168/248 (67.74%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06 Identity = 36/131 (27.48%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 33/116 (28.45%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy TrEMBL
Match: A0A1S3C7C6 (putative B3 domain-containing protein Os03g0621600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-81 Identity = 171/288 (59.38%), Postives = 202/288 (70.14%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy TrEMBL
Match: A0A1S4E1Q2 (uncharacterized protein LOC103497524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.7e-77 Identity = 171/326 (52.45%), Postives = 202/326 (61.96%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy TrEMBL
Match: A0A0A0LJV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292240 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66 Identity = 144/248 (58.06%), Postives = 168/248 (67.74%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy TrEMBL
Match: A0A5D3CPB8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002620 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 4.6e-61 Identity = 133/205 (64.88%), Postives = 153/205 (74.63%), Query Frame = 0
BLAST of CcUC02G030020 vs. ExPASy TrEMBL
Match: A0A1S4E1R1 (B3 domain-containing protein At3g18960-like OS=Cucumis melo OX=3656 GN=LOC103497525 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 7.6e-56 Identity = 142/286 (49.65%), Postives = 179/286 (62.59%), Query Frame = 0
BLAST of CcUC02G030020 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 55.5 bits (132), Expect = 7.6e-08 Identity = 36/131 (27.48%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CcUC02G030020 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 53.1 bits (126), Expect = 3.8e-07 Identity = 33/116 (28.45%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CcUC02G030020 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 45.4 bits (106), Expect = 7.9e-05 Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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