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CcUC02G029880 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTTCCTTTTTATGTGTGTGTAGATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCATAAGCAAGAAAAAGATTTTCAGGTTTTCTTTTTATGTCCCTTAATTATTCATTGTTTTCAAAATTAATTAAAAAGATGATATTATCATTGTTATTATATTTAGGAAAAGGCAATTGAAGAAGTATATGCAGGGCATTTAGTTGTGTATTACCGATGTGAAAAATGTGGATGCTCTTTTGATCTTGAAACCTCTCTTCGCTCACATCATTGCAAAGTAATTAAGCTTCTTCTCTTTTTTTCTTTTTTCTTTTTTTTATTCAAATTTTGTATTTTTAATTTTAATATTTATAAATATTTGCAGCAGAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGGAGTGGAGAAAAATTTGGGGGAGAACAAGTCTTTCAGAAGAAGAAGTAGGAAGGGAATACCAACACGGGCTCCTTTCTTTTAG AAATTTTCCTTTTTATGTGTGTGTAGATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCATAAGCAAGAAAAAGATTTTCAGGAAAAGGCAATTGAAGAAGTATATGCAGGGCATTTAGTTGTGTATTACCGATGTGAAAAATGTGGATGCTCTTTTGATCTTGAAACCTCTCTTCGCTCACATCATTGCAAACAGAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGGAGTGGAGAAAAATTTGGGGGAGAACAAGTCTTTCAGAAGAAGAAGTAGGAAGGGAATACCAACACGGGCTCCTTTCTTTTAG ATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAACATTCCAAAACTCATAAGCAAGAAAAAGATTTTCAGGAAAAGGCAATTGAAGAAGTATATGCAGGGCATTTAGTTGTGTATTACCGATGTGAAAAATGTGGATGCTCTTTTGATCTTGAAACCTCTCTTCGCTCACATCATTGCAAACAGAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGGAGTGGAGAAAAATTTGGGGGAGAACAAGTCTTTCAGAAGAAGAAGTAGGAAGGGAATACCAACACGGGCTCCTTTCTTTTAG MDDKSVPYNLRLRRDHKASSPTEHSKTHKQEKDFQEKAIEEVYAGHLVVYYRCEKCGCSFDLETSLRSHHCKQNKSEKEAIMEIGVEKNLGENKSFRRRSRKGIPTRAPFF Homology
BLAST of CcUC02G029880 vs. NCBI nr
Match: KAE8651931.1 (hypothetical protein Csa_006531, partial [Cucumis sativus]) HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34 Identity = 78/109 (71.56%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of CcUC02G029880 vs. NCBI nr
Match: XP_023511836.1 (uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.5 bits (345), Expect = 7.0e-29 Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0
BLAST of CcUC02G029880 vs. NCBI nr
Match: KAG6571418.1 (hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28 Identity = 77/112 (68.75%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of CcUC02G029880 vs. NCBI nr
Match: KAG7011182.1 (hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of CcUC02G029880 vs. NCBI nr
Match: XP_022928048.1 (uncharacterized protein LOC111434950 [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 1.7e-27 Identity = 75/113 (66.37%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of CcUC02G029880 vs. ExPASy TrEMBL
Match: A0A0A0LQ06 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G287130 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37 Identity = 81/112 (72.32%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of CcUC02G029880 vs. ExPASy TrEMBL
Match: A0A6J1EMR9 (uncharacterized protein LOC111434950 OS=Cucurbita moschata OX=3662 GN=LOC111434950 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 8.3e-28 Identity = 75/113 (66.37%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of CcUC02G029880 vs. ExPASy TrEMBL
Match: A0A6J1D739 (uncharacterized protein LOC111017959 OS=Momordica charantia OX=3673 GN=LOC111017959 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.6e-21 Identity = 67/117 (57.26%), Postives = 79/117 (67.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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