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CcUC02G029550 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTTGGTAGCAAAGACGATTTTCGCCCCACAACGCCCGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAG ATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTTGGTAGCAAAGACGATTTTCGCCCCACAACGCCCGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAG ATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTTGGTAGCAAAGACGATTTTCGCCCCACAACGCCCGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAG MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPNA Homology
BLAST of CcUC02G029550 vs. NCBI nr
Match: XP_011650158.1 (precursor of CEP9 [Cucumis sativus]) HSP 1 Score: 214.9 bits (546), Expect = 3.8e-52 Identity = 105/128 (82.03%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of CcUC02G029550 vs. NCBI nr
Match: XP_008457955.1 (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 uncharacterized protein E6C27_scaffold243G003610 [Cucumis melo var. makuwa] >TYJ99451.1 uncharacterized protein E5676_scaffold123G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51 Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CcUC02G029550 vs. NCBI nr
Match: KAE8651918.1 (hypothetical protein Csa_006213 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of CcUC02G029550 vs. NCBI nr
Match: KAG6571310.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28 Identity = 73/119 (61.34%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of CcUC02G029550 vs. NCBI nr
Match: KAG7019315.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28 Identity = 73/119 (61.34%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10 Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08 Identity = 29/58 (50.00%), Postives = 33/58 (56.90%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy Swiss-Prot
Match: Q9SKW7 (Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 4.0e-04 Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy TrEMBL
Match: A0A0A0LMN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52 Identity = 105/128 (82.03%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy TrEMBL
Match: A0A5A7TR16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00110 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51 Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy TrEMBL
Match: A0A1S3C7Z6 (uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51 Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy TrEMBL
Match: A0A438KJP7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_001818 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13 Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of CcUC02G029550 vs. ExPASy TrEMBL
Match: A0A438F583 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_066883 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13 Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of CcUC02G029550 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11 Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of CcUC02G029550 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09 Identity = 29/58 (50.00%), Postives = 33/58 (56.90%), Query Frame = 0
BLAST of CcUC02G029550 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04 Identity = 21/28 (75.00%), Postives = 21/28 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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