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CcUC02G029310 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACACGCTGAACAAGCAAACGCAAAACACCCAATTCGCAGCCACAAAAATTAAAGAAAAACCCTTTCAAACCTTCAATTGGGATAATCCGACTCCAAAAAATCCCACGAAAGGCTCAAAACAATCCACGCAGCGACAAATCTTTGTCCAAACCCTCAAAATCTTCAATGGGTCGCACCCATTTTTCTTCTCCGATAAGCACACTGCAATCGGAGAACACTCTCAAGTAGATGCTTAGGCTGAATGTGTACTGCAGCAGCTGCTGCTCTCTGATTCCCTATAGCAGAGATGTAAGGACATCCTTTCGATTTCAATTGAGGCAAAATCGGAGGCTCAATCCACGGGTTTTGGCCAAGGCCTTGAAGGATGATCAGACTGACGGCGGCGGCGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTATGGAATACCTTTCTATAATTAATTCATCATTCAATTTCATGTTCTTTCTCTTTTTCGTATTTCCATAAGCATATTCATTATTCTTTTCCTATTTTAGAGAATACTATTAGTTTCATCATTGTTCTAAACTCCTAAGCAGTGATTAATGATTATGGATAAGAGTGAGCAACCAAAAGTAGACTAAAACCATTAAACCACTGATTTAGAAGCAGACTAAGTTCTCTTTGGTAATTAATTATATTCAAAGCTTAATAAAGTAGTAGTTTACATTTCTTATTTTTATGTTATGGGTAGTTGCAAGTCTAGCTTAATAGGAATTAAATACTACAAAAGCAATAGCTAAAATAATCAATATAACTTGTTTATTTTGATCTAGCATAAGCATGACTATCCATTCTGTTATCAATTAAAATAATGGACATTATTAAAGCAAATAAGTGATGAATGACTTTTAAAAAGAGTACTATATTTTAACATTTATAATTCTTTAATAGCAAACTGCATAAATGCAATTGTAGTTTAGCGACATCCTTCCATTCTTTTTTATTCTTAAAATCGGGCTAAGATCTAGGAAATTGTTTGTAAAAGTTGAAATCCTTCAAATGAAAAAAAGTGGATCCAAAACTAAAAGACGAGATGTCTCACAATCATGATGATGAAAAATTGTTTAATTGTGTAATTGGCAGAATGCGGTTTTGTTACATATGCATGTGACTGATGATCCCGTTAAATAAATAAATAAATAAATAAATAAAAATTAATCGGTTTACTAATGGTTTAGTTTCAATTTGATGCTTATGATGAAAAAATTTCTATTTTCCTCCTAATGATTGTTTGGTTAAACCTCACAAGTCATTATAAATTGTGTTTCACCTAGTTGAAAAATCCATCTATTTCCTTCTGTGTTTTACTCTTTCCTAAATCTTAATATAACCCAAATTGAAAACACTACTTTGTTGTCATGTAAAAAAAATTGAGTCAATGTGGTAATGACAGGGATGATTTGTGAAGTTTTACTAAACTTTGGGCTAAATTGAATCTTTTAAATCATAGAGACCAAATAGAAACTACAGCCAAGTCATAGAGATGAAATTAAAACTAAGCTTAACTCTTGAAATGTTTAAAATCAAAGAAACCAAATTCAATCCCATTGATTTATGATGCATAATATTTGTGGGAATGCAGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGAGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGCTTCACAGTCTTGGGAGTCCCCATTGCAGCCGCAAGCTTCAATCCTTCACGGGTACGTTACAAACTAATAGTACTGAATTTGAAGAAAGCTCTTAAATTAGCGACCCAGCTTTAATTTTTGTGGTTACCCTTTTGTTTGTTTCAGGAACCTCTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATCGTCTTGAGAATATATCTGGCAAGTTTCTTCATTATCCATTACTATAGTTCTGGCTTAGGTGAAGGTATCTGAATTGACTAGCAATGGAAGTGGAGGTTAAGAATATGTATAAAAGATTAAAGGTGTGTTTGGATTGACTTTTCAGGTATTTAATGAAAATAAGTTACCTTAGCAAGATTTGTAATGTTTTACAACCACTCAAAATAGTTTTTGAAAAAACAAGTTTGAGATAAGTTTATAGATCCGGGTTAGGTGAAGACATCTGAATTGAACTACCAATGGAAATGGAGGTTAAGACGATGTCTAAAAGATTAAGAGTATGTTTGGATTGACTTTTCAGGTGTTTAATTTTGAAAATAAGTCCTTTTAGCAAGATTTGTAGTTTTTGGCAATCACTCAAAATGTCTTTATGAAACATGAGTTTAGGATAAGTTTATAGTTTTGGTGAAGGCATCTGTATTGAACTAGCACTAGAAATGAAGGTTAAGAATATGTATAAAAGATGAAAGGGTGTGTTTGGATTGACTTTTCAAGTGTTTAATTTTGAAAACAAGTCATTTTAGGTAAACTAGTAGTATTTAAAGGACTCAAAATGTCTTTTTAAGCTGGCCCGAACACTTGTAGATAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAACTTTTTAAAAATGAGTTTGGGATCAGTTTGTAAGGGTAGAAAGTCTTTTAGCCCCATTAAGGAGCACTTTTCAAAATTTTGGTAGTAATTAGTTAGATAATTCATAGTAATTTTGAAAATTCTAGACCACTAAGAACACTTAAAAGTACTATTAGAAGAAGCACTAATCACTGCTGCTTTTAGAAAAAGCACTTCCTTGTTCCTGAAGTGTTACATGGGAAGTATTTTCAGTACCTTTCCCAAAATTAACTCTATAGTCACTGCAAATATGCCTGGCCTATCTGCATGAGCTTTAAGATTTAGTAGTAGTTAACAAAATGTTAGAATAAGAGATTTTAGATTTAAACCTTTTGCAATGTCATTTCCTTATCTATACAATGATCCACATGTTGGGTCTTCTCTTAATTTTCAAGCCTTCAAATACAGGAAAGATGTTAAAAGAGTGCATAAAGAAGTAAACCTATCATAATTTATTAGCTTAAACTTTTGAGGCGGCTTATTGGTAGTTTTAAGCATAGATGGGATTGTGGTTTCAGGGTTGGAGTTATGTGGGAGATAGGCTGTTATCAGCAGTCATACCTTACGAAGAGAGTGGATGGTATGATGGTCAAATGTGGGTCAAACCACCCGAGGTAAATTATTAACATACTTTGATTTTCTTCTCTTAGTTTGTTATCATGTTTAAACCGGTTTAAGTAGCTGTAATGTTATTTCCTCTCCATTTATAGTAGAAATAGAGACCTTGTGCATTTTGAGGGAATTTTCTCTCCATTGACTTTGGTTGGTAATGATAATTTAACCTTCTCATGTTGGTTGTAGGTTCTAGCTCGTGATAGATTGTTAGGATCTTACAAGGTATTTTCCAATACCAATATATTAAATCTTAGAGAAAGTTATTCTAATACGAAATACCATTTAAATTTTCATATAACTAAAACTTGAACAAAAAAAAAAAAAAAAAAAAAAAACTGCAGGTTAAACCAGTGATCAACATGCTTAAACAAACACTAGTTGGAACAGGGATTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTGCTACACCTGTAGAGGATTTTCTACAAACCACATTTTCCTCAAAGCAAATCTTATCATCCAACGATAATCCAGATTCAAACATCAACAAAAAATACAACTTAAGGTAATGATATGAGATTATAGATTGGGGGGTTCTTTCCATGTATTCTCCTTCGTAACTTGGATTTTATGTCTGTAGAAAGGAGCAGTTGCTTCGGTTACCGGTTGAGGTCATGGCTGACGACGAGCTTGCAGCGGCAGCGGCCGAGGCAGCTGATGGAAGACCGGTCTACTGTAGAGATCGGTATTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAAATACAAAGCTGGGGAAGTAATGTTGATAGAACAACTTGGTTTCTGTTCAAGTAAAATCACAATCCTCCATGTATCATTCTACATTTTGCCAATTAATTGTAAGTCTTATCTTTTGTTATTTGTTATAATGTTCATAAATTTTGGTTATCTAAGTTGAAAGATTGAGTACTATTGAAGAAGTGAGCTTTGGTTTACTTTAAGCTGAATGGAATAGATGGTTGATATACAATATAAGAAAAAATCCCATTCTTTCAAAATTGTAATTAAAGCTGGAATATTACACTT TCCACACGCTGAACAAGCAAACGCAAAACACCCAATTCGCAGCCACAAAAATTAAAGAAAAACCCTTTCAAACCTTCAATTGGGATAATCCGACTCCAAAAAATCCCACGAAAGGCTCAAAACAATCCACGCAGCGACAAATCTTTGTCCAAACCCTCAAAATCTTCAATGGGTCGCACCCATTTTTCTTCTCCGATAAGCACACTGCAATCGGAGAACACTCTCAAGTAGATGCTTAGGCTGAATGTGTACTGCAGCAGCTGCTGCTCTCTGATTCCCTATAGCAGAGATGTAAGGACATCCTTTCGATTTCAATTGAGGCAAAATCGGAGGCTCAATCCACGGGTTTTGGCCAAGGCCTTGAAGGATGATCAGACTGACGGCGGCGGCGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGAGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGCTTCACAGTCTTGGGAGTCCCCATTGCAGCCGCAAGCTTCAATCCTTCACGGGAACCTCTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATCGTCTTGAGAATATATCTGGCAAGTTTCTTCATTATCCATTACTATAGTTCTGGCTTAGATAGGCTGTTATCAGCAGTCATACCTTACGAAGAGAGTGGATGGTATGATGGTCAAATGTGGGTCAAACCACCCGAGGTTCTAGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTTAAACAAACACTAGTTGGAACAGGGATTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTGCTACACCTGTAGAGGATTTTCTACAAACCACATTTTCCTCAAAGCAAATCTTATCATCCAACGATAATCCAGATTCAAACATCAACAAAAAATACAACTTAAGAAAGGAGCAGTTGCTTCGGTTACCGGTTGAGGTCATGGCTGACGACGAGCTTGCAGCGGCAGCGGCCGAGGCAGCTGATGGAAGACCGGTCTACTGTAGAGATCGGTATTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAAATACAAAGCTGGGGAAGTAATGTTGATAGAACAACTTGGTTTCTGTTCAAGTAAAATCACAATCCTCCATGTATCATTCTACATTTTGCCAATTAATTGTAAGTCTTATCTTTTGTTATTTGTTATAATGTTCATAAATTTTGGTTATCTAAGTTGAAAGATTGAGTACTATTGAAGAAGTGAGCTTTGGTTTACTTTAAGCTGAATGGAATAGATGGTTGATATACAATATAAGAAAAAATCCCATTCTTTCAAAATTGTAATTAAAGCTGGAATATTACACTT ATGCTTAGGCTGAATGTGTACTGCAGCAGCTGCTGCTCTCTGATTCCCTATAGCAGAGATGTAAGGACATCCTTTCGATTTCAATTGAGGCAAAATCGGAGGCTCAATCCACGGGTTTTGGCCAAGGCCTTGAAGGATGATCAGACTGACGGCGGCGGCGGCAGATTTTCCGGCCAGAAATGGGACCCTGGCTTGGAAATTGAAGTCCCCTTTGAACAACGCCCGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGAGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTTGGAGGGCTTTGGTTAGTAAGCTTCACAGTCTTGGGAGTCCCCATTGCAGCCGCAAGCTTCAATCCTTCACGGGAACCTCTGCGATTTGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTTTCCTTGATCGTCTTGAGAATATATCTGGCAAGTTTCTTCATTATCCATTACTATAGTTCTGGCTTAGATAGGCTGTTATCAGCAGTCATACCTTACGAAGAGAGTGGATGGTATGATGGTCAAATGTGGGTCAAACCACCCGAGGTTCTAGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTTAAACAAACACTAGTTGGAACAGGGATTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTGCTACACCTGTAGAGGATTTTCTACAAACCACATTTTCCTCAAAGCAAATCTTATCATCCAACGATAATCCAGATTCAAACATCAACAAAAAATACAACTTAAGAAAGGAGCAGTTGCTTCGGTTACCGGTTGAGGTCATGGCTGACGACGAGCTTGCAGCGGCAGCGGCCGAGGCAGCTGATGGAAGACCGGTCTACTGTAGAGATCGGTATTACCGAGCATTAGCTGGGGGACAATACTGCAAATGGGAGGACTTGATCAAGTAA MLRLNVYCSSCCSLIPYSRDVRTSFRFQLRQNRRLNPRVLAKALKDDQTDGGGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPIAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASFFIIHYYSSGLDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGIVLVSAVLLFIFATPVEDFLQTTFSSKQILSSNDNPDSNINKKYNLRKEQLLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLIK Homology
BLAST of CcUC02G029310 vs. NCBI nr
Match: XP_038900298.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida]) HSP 1 Score: 564.7 bits (1454), Expect = 5.1e-157 Identity = 290/319 (90.91%), Postives = 297/319 (93.10%), Query Frame = 0
BLAST of CcUC02G029310 vs. NCBI nr
Match: KAA0045780.1 (uncharacterized protein E6C27_scaffold243G003010 [Cucumis melo var. makuwa]) HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156 Identity = 286/321 (89.10%), Postives = 301/321 (93.77%), Query Frame = 0
BLAST of CcUC02G029310 vs. NCBI nr
Match: XP_008457771.1 (PREDICTED: uncharacterized protein LOC103497381 [Cucumis melo] >TYJ99501.1 uncharacterized protein E5676_scaffold123G00680 [Cucumis melo var. makuwa]) HSP 1 Score: 559.3 bits (1440), Expect = 2.1e-155 Identity = 285/319 (89.34%), Postives = 296/319 (92.79%), Query Frame = 0
BLAST of CcUC02G029310 vs. NCBI nr
Match: XP_022947583.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata] >KAG6605201.1 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153 Identity = 286/325 (88.00%), Postives = 296/325 (91.08%), Query Frame = 0
BLAST of CcUC02G029310 vs. NCBI nr
Match: XP_004149699.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic isoform X1 [Cucumis sativus] >KGN61972.1 hypothetical protein Csa_006641 [Cucumis sativus]) HSP 1 Score: 552.4 bits (1422), Expect = 2.6e-153 Identity = 282/319 (88.40%), Postives = 294/319 (92.16%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 3.0e-112 Identity = 210/285 (73.68%), Postives = 237/285 (83.16%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.0e-24 Identity = 60/163 (36.81%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.4e-23 Identity = 62/163 (38.04%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.6e-20 Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11 Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy TrEMBL
Match: A0A5A7TRK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003010 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156 Identity = 286/321 (89.10%), Postives = 301/321 (93.77%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy TrEMBL
Match: A0A5D3BLA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00680 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155 Identity = 285/319 (89.34%), Postives = 296/319 (92.79%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy TrEMBL
Match: A0A1S3C6Y4 (uncharacterized protein LOC103497381 OS=Cucumis melo OX=3656 GN=LOC103497381 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155 Identity = 285/319 (89.34%), Postives = 296/319 (92.79%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy TrEMBL
Match: A0A6J1G705 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451407 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 7.4e-154 Identity = 286/325 (88.00%), Postives = 296/325 (91.08%), Query Frame = 0
BLAST of CcUC02G029310 vs. ExPASy TrEMBL
Match: A0A0A0LMH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277630 PE=4 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153 Identity = 282/319 (88.40%), Postives = 294/319 (92.16%), Query Frame = 0
BLAST of CcUC02G029310 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) ) HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-113 Identity = 210/285 (73.68%), Postives = 237/285 (83.16%), Query Frame = 0
BLAST of CcUC02G029310 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) ) HSP 1 Score: 122.9 bits (307), Expect = 4.8e-28 Identity = 76/169 (44.97%), Postives = 104/169 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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