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CcUC02G029230 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAACAATTCCCCGAATATTCATTTTGTAGATTGATTGGTGCCACGTGGCAATTAGAGCTTGCTTTTTGTGCTTCTTTTCTCCGCCCCTTTTGTTACAACACCACAAGCTTCTTCGAATCTGAAATACGAAGTGGAGAGCAGAGGATCGTAACGGATTCGGCTGCTGTGTGATCGGAGGGGATGGAGGTGGAGCCGGAGATTGATCGCTTGCCGATTGATCTACTGGCTGACATTTTTGCGATGATAACCTACTTCGCCGATTTGGCTTTTGGTTAATGTTTTTTTTTTCCCCTTCAATTGCTCTGGTTGTTGTTCTTAATTTCTAGGGTTTCTGCGATTGTGGAAAAACGCAGGGTGTGCGGGGTTTGTAAGAAATGGAAGCAAGGAGTTAAAATGTCTATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATCACTCCACTGCTCGCCTTATTCGCCATGAATACAGCCTTCGAGAGCTCGACATGTAATCTCTAACCATGATTTAAGTGATTCTAACCTGGTTTAAGTCATTTTTGTTTTTTTTTTTGTTTGGAAACCTATTTTTAATTCTTTAAAATTAATTTTAATATTTAAAAATTGAGTATTAAATTAATTTTAGAAAAATTACTATAAATAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTTAGGTATAGAAGTCTATCATTTTTTATCTCTATTGTTGATAGACAATAAAACGTTTCTATACTTGTAAATAATTTGACTCATTTTGCTTTATTTAAAGACATCCTTAATTTTGAGTGTTTATAGACGTGTTCTAGAATAATTTTAGAGATGAAAGAAAGAGATTTTAACAATTTCAAAATCATTAACACGTTATCTTTTTTTAAAAATTTTTTCTTTTCTTTCCTGATATTTTCTTCGCATTGCTTTTCTTCAAGTAGTTTCTAATTGAAAATGGGTGTTTTTGGTCTAATGATAATGATGTCAGTTAGGGATGTTCAAAAAATTTGTTGTCTCGAAAAATCTGATCAACCCAATCCAATCTTTTGGGTTGGGTCCAAATCAACTCAAAATTTATGAGTTGGGTTGATTCATGGGTTCTTAGCCAAAACCAATTCAAACTTCTTATTAATTAAAAAAAAATGTGTTTTTTATACAAATATATATACATATGTCTATTTTAATTTTATTTAATTTCATGATTTTATTTGATAATTTGTTTTCAAACAACTTATAAAAATAGCTTTTGAAAAGAAAATTTTCATAGGAGACCTAGTTATTAATTTTAATTAAATATATGAAAGTTTTAAATAAAGTTTTTAGGATTAATATTTTACTTATTTTTAGAATAAAAATTTAAAGAAGCTATTGGATAACCCAAATCAATAGTTTCATGGTTAGGTTCATTATTTAATGAGAATTATTTGAGTTGAAGAAACTTATATCTTGAACCATTAGTTTGGGTCTAAAAAGTATTAGGAGTAAAATACTTTTCTGCGCTTACCTTCTTGAATCTTCACCAATACTTCTTCATTGTTTTTACCAATTCTTTTAACCAAAAATTAATTTTTTCTGTCTACTTATAACAACAGTGAATAAGAAATTCTAAAACGAAAGTTTTCTCACGATTTGGGTTGACAATTCTTTTGCTGAGATTTTTTTTTTTTAAAAAAAAGGAAAATTATTTTAATGACAAAACTGTTAAAGATATTTATGACTAATAGCAAAATATACCGTCTATCGCGGTCTATTAAAAATAGATAGTGAAATTTTGCTATTTGTAAATATTTTGGTTTTTTTTGCTATATTTGAAAAGAGAAAAAAAATGATAAGAATTTAGAAAAAGAAAATTATTAGATAGTGTTTTCTTTGTTTGGTTGAATAAAAAATTAGAAAAATATTTTATAAATAAATGTTGTTTTTAAATATAGTAAAATAATTCAAATTATTTACAAATATGGAAAAATTTCTGCAATAGACTTTTATTACTAGAAGTCTTAGTAAATTTTTTTATATTTGTAAATNGTTAAAAGAGTTGGTGGAAACTGAGAAATTTATGGATTTGGACTCTGATATTGGGCATTTATGACTTTTCGTTCACCTACAAAGGTCTCCAAATACATTTTTTTCAAAAAAAAAAAAAAAAGGCTTATTTTCCGAATTTAAAACTAAAATAACCCACTTTTTTTGAAAATTGTTTTGTAAAGCCTTTTATATTAGTGATGTTCATGGCTCATGTTTTTGGTTGATCTTCAAGGACACATTAGATTATTCCCAAATCCTTGGGAAACATTATGAGAGCAACACAACGGAAAAGAAATAAAACAGAGTCAATGTATTAAAAAAAAAAAAATTAGTTTATGTTTGAGTAATTTTGAAATTGTTAAATCACTTTTGTCATATTTAAAATCACTTCAAAAATACGTCATTCATCATTTAAAACTAATTTAATATTTTATTTTACACTTTTTAAATTTAATCTTCATATCATAAAATTTGTTTTGAATGATTAAAAGTATATGTTAGGAGTGATTTCAAAAATATCAAAAAGTGATTTTAAGTATTTCAAATCCACCTCCAAAATATGCCTTCCAAACAGCCGACTGGTTCATCATTCTCTTGTAATATGTGTTTTGTTTTTCAGGTCAAGAAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTGCAAGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGTTAGGGATCACCGACAACGGTGTTGTGCAACTGGTATGATATTATTTTATCTTACACCAAACATGGCTGAAGTAACCGCTCTATTTTTGCCTATCTCCTTTAGAATCTATTTGATTTTTCATTCTGATCTAGTTTAGGAAACAATTGAAAAAGATTTTTATTTGTTTTGAGATCCTTTATCCTTGCCTTGGATTATTGAATTTAGACATTACTTTGGTGATCTTTAACCGTTTCAAGATGTGGCAGCCCATAGAATAGCCCTTAAAATAGGGCTCATGTGTGAATTAGAGTATAGGTTTAGGTGGAAACTAAACTACTGAATTTCTTTAAATTTTACTTTGTTTGACAATATCTTTGTTTGTATCTTCATCTCCGTACCAATAAGTATCTGTATTGTCTTAGTTGTTTGGATCCACCTTTGAAAAGTACACACCAGTTTTAAGAAATCCTCTGGTTCCCCAAATGTCATCTTCTTGAGAGGAATTTAGAACTTACATGATTTTGGTTGTACTGTCCCCCTTAAAAGTGGTTAAATTATGAATTTGGTTCCAATAGTTTGAAAAAAAGTTAGAATTTAATTCCTATGGTTTTAAAAGTTAGAATTTGGTCCGTATGGTTTGGAGAAAATTAGAATTTAATCACTACTTTAAGGAGTATTTATGAGGGCTTTATCAAACTATAGGGACTAAATTCTATTTTTAAACCATAGAGACTAAATTTGTAATTTAATCTAAGTAAAGGTTAAATTTTCACAAAAGGAAAAACAAGAAACAACTTTCAAAAAATGGTAATCCACATGCCAACATTAGCATAGCTGCCTTACAATTAACATAGTTGAGTCACTTAAAGTATATACTTTCGATCAAAAGGCCAAAATTTGAACTTCTCACCTCCACATATTGTTGAACTAAAAATAAAAGTATACCACATGTGCTTCACTTCACTTTTGTTCTAAAATGCAGAAAATCAAGGAGGTGGTAACTGAGTTGGTTATAATAATTTGTGGGGTTATCATAGTCTATGGAGTTCTTTAATCTGTGTTTTGGGGTGCAAACTATTTTAGTATGAATTTAAGTAATTTGTATTTGGAGTATACTATTTTAGTCCGTATTCAGAAAGTTTATGTTTAGGGTGCAAATTAATTTAGTCCGAGTTCAAGGTTTACATGTTTGATTTTAGATAGTCTATGTTTTTTAAAAGCTCCAAAATAGCCTGTTAGCACCCCCTTCCATTTTGATGTCTTTCACATTTCATTAGCATTTCACTAGCCAACTCCTTGCAAAACCTGAACATAGGCGGCACCTATATCACAGACATATCTCTGCTTGCAATTGCTGATAACTGTCCAAATTTGAAGGTCATTAATCTTCTTCACTTCCATTGCCAAACCTTTTCATGAATCATATGATACCTACATTGCCTTGCACAATCTTTAATCAGTGCATTTCTTTCTTAATTCTGCAGACCATTGTCCTCTGGTGCTGTCGTCCCGTAACGGAGAGCGGACTTTTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCAATAAATGTCTGGGCAATGAGGGTTCCTGTTGACTGCTTCATTGGTTTACTCTCAAAAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTATGTTGGTGTAAAATATGTCACCTCAAATAAAACCAAGAAGTGTTCTTGATTTTATGTAGCCTGTTGTGTGAAATGTGCTCAAATACCACATCCTGTAAAGCTCTATTGAATGTATGTCTTCATCTTTGTGTTTCCCTCATTCTAGTTAAATATAGTTTTGATTGTGTTACTTTCAGTTCATTTAGCCACTAAATTAATTTTACTGAC GTTAACAATTCCCCGAATATTCATTTTGTAGATTGATTGGTGCCACGTGGCAATTAGAGCTTGCTTTTTGTGCTTCTTTTCTCCGCCCCTTTTGTTACAACACCACAAGCTTCTTCGAATCTGAAATACGAAGTGGAGAGCAGAGGATCGTAACGGATTCGGCTGCTGTGTGATCGGAGGGGATGGAGGTGGAGCCGGAGATTGATCGCTTGCCGATTGATCTACTGGCTGACATTTTTGCGATGATAACCTACTTCGCCGATTTGGCTTTTGGTTAATGTTTTTTTTTTCCCCTTCAATTGCTCTGGTTGTTGTTCTTAATTTCTAGGGTTTCTGCGATTGTGGAAAAACGCAGGGTGTGCGGGGTTTGTAAGAAATGGAAGCAAGGAGTTAAAATGTCTATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATCACTCCACTGCTCGCCTTATTCGCCATGAATACAGCCTTCGAGAGCTCGACATCATTTCACTAGCCAACTCCTTGCAAAACCTGAACATAGGCGGCACCTATATCACAGACATATCTCTGCTTGCAATTGCTGATAACTGTCCAAATTTGAAGACCATTGTCCTCTGGTGCTGTCGTCCCGTAACGGAGAGCGGACTTTTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCAATAAATGTCTGGGCAATGAGGGTTCCTGTTGACTGCTTCATTGGTTTACTCTCAAAAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTATGTTGGTGTAAAATATGTCACCTCAAATAAAACCAAGAAGTGTTCTTGATTTTATGTAGCCTGTTGTGTGAAATGTGCTCAAATACCACATCCTGTAAAGCTCTATTGAATGTATGTCTTCATCTTTGTGTTTCCCTCATTCTAGTTAAATATAGTTTTGATTGTGTTACTTTCAGTTCATTTAGCCACTAAATTAATTTTACTGAC ATGTCTATTGGTAGAAGAAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATCACTCCACTGCTCGCCTTATTCGCCATGAATACAGCCTTCGAGAGCTCGACATCATTTCACTAGCCAACTCCTTGCAAAACCTGAACATAGGCGGCACCTATATCACAGACATATCTCTGCTTGCAATTGCTGATAACTGTCCAAATTTGAAGACCATTGTCCTCTGGTGCTGTCGTCCCGTAACGGAGAGCGGACTTTTTATTCTTGTAAGTAAATGTCGCAAACTCGAGTCAATAAATGTCTGGGCAATGAGGGTTCCTGTTGACTGCTTCATTGGTTTACTCTCAAAAAGTCCATCACTTCAAATAAAATCAAGAAGTGTTCTTGATTCTATGTTGGTGTAA MSIGRRKSLSFAGWKMDDHSTARLIRHEYSLRELDIISLANSLQNLNIGGTYITDISLLAIADNCPNLKTIVLWCCRPVTESGLFILVSKCRKLESINVWAMRVPVDCFIGLLSKSPSLQIKSRSVLDSMLV Homology
BLAST of CcUC02G029230 vs. NCBI nr
Match: XP_038902841.1 (F-box protein At5g67140 isoform X3 [Benincasa hispida]) HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52 Identity = 117/175 (66.86%), Postives = 125/175 (71.43%), Query Frame = 0
BLAST of CcUC02G029230 vs. NCBI nr
Match: XP_016902159.1 (PREDICTED: F-box protein At5g67140-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 5.0e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. NCBI nr
Match: TYJ99507.1 (F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 5.0e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. NCBI nr
Match: KAA0045775.1 (F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 5.0e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. NCBI nr
Match: XP_038902095.1 (F-box protein At5g67140-like [Benincasa hispida]) HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49 Identity = 111/175 (63.43%), Postives = 122/175 (69.71%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.9e-36 Identity = 84/171 (49.12%), Postives = 103/171 (60.23%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy Swiss-Prot
Match: Q8BH70 (F-box/LRR-repeat protein 4 OS=Mus musculus OX=10090 GN=Fbxl4 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.2e-07 Identity = 39/123 (31.71%), Postives = 67/123 (54.47%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy Swiss-Prot
Match: Q0VD31 (F-box/LRR-repeat protein 4 OS=Bos taurus OX=9913 GN=FBXL4 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06 Identity = 34/106 (32.08%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy Swiss-Prot
Match: Q9UKA2 (F-box/LRR-repeat protein 4 OS=Homo sapiens OX=9606 GN=FBXL4 PE=1 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 3.5e-06 Identity = 38/123 (30.89%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.6e-04 Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy TrEMBL
Match: A0A5A7TWK2 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002960 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy TrEMBL
Match: A0A5D3BK56 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00740 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy TrEMBL
Match: A0A1S4E1Q4 (F-box protein At5g67140-like OS=Cucumis melo OX=3656 GN=LOC103497374 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50 Identity = 116/177 (65.54%), Postives = 122/177 (68.93%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy TrEMBL
Match: A0A1S4E1P2 (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.6e-49 Identity = 110/175 (62.86%), Postives = 122/175 (69.71%), Query Frame = 0
BLAST of CcUC02G029230 vs. ExPASy TrEMBL
Match: A0A5D3BMX7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00750 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.6e-49 Identity = 110/175 (62.86%), Postives = 122/175 (69.71%), Query Frame = 0
BLAST of CcUC02G029230 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37 Identity = 84/171 (49.12%), Postives = 103/171 (60.23%), Query Frame = 0
BLAST of CcUC02G029230 vs. TAIR 10
Match: AT5G23340.1 (RNI-like superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 3.6e-06 Identity = 27/89 (30.34%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of CcUC02G029230 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 ) HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05 Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 0
BLAST of CcUC02G029230 vs. TAIR 10
Match: AT5G27920.1 (F-box family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04 Identity = 23/68 (33.82%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of CcUC02G029230 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04 Identity = 24/77 (31.17%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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