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CcUC02G029170 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAATGAAAAAAGGGAAATCGGGTATGTCGTTCTCGTACCAATACAACCTCAATTTTACTTCATATTTTGCTCTTAGAAAAAGGAAGCGATAAAAGCTGTTGTCGACGAAGTACACGTAAACTAACGGCTGCAATTTAGCAATCGTGAGCGAATCGTTAGCAAAAGAAAATGAAAACGGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGCTCTCCCCTCACTGCTTTTCCGCCGCCGTGGAGTCACCGTACGCTTCTCTACGTCTTCCTCAACTTCCGGTTAGTTCACCGCGAGCTTATTTATAGCACATTTCCTACAAGATTCTCAAAATCTTAATGCCTTTTTGAACCATCGCGTTATTGCAGAGCATGTATCATTCATCAAAGATATTGCTGCTACTGAGCCTCCTCAGCATCTGTTTCATTTGCTGAAAATGCTGAAGACTAGAGGTGCGTTGTTGCTCAAGCGCTCCAATCATTCCCGTTATGTAAATACGAATTAATTGCTTACAATTCAGAGGTTTCCTGATTGAATCCATCAATTTTTTACTAGGTACTCTAGTTCTTTGTCTTTTGAAGTTGTTGACTGCAAAATTTATGAGCAAGAGTGTGTAGACTGGCATTCTAATTAGAAGTGAAAGAATCCTGTTGAATAGATTTCGTTTTGGAAATCCGTAGACCTAATGGCGTATATCGCAACATTCTTGTCAAATGATTAATAATCTAGGGTTTTGCCTTAATGTTATTTTGTGGCCTATGTTATTAGTATTGTATGCTTGATATGTAGTTCTGTATCCGTTTCTGCAATGTAATGGTCTTGTTTATCTGTTTTTCTTTTGTTGAATTCATTCCATATTCCTCCAAATTCATTGTTGAAATTCATTCACTGGTTATTCCATCCAAGATATATGTTTAAATTGGAATGCTTCATTTTCATTTCTTCAGTTTAATTATGTAGTTAAGACTTTGATTTTGATGTATTTTGTATTGGGATATGATGAGGGCGCTAAGGATGTGTCAACTTAGTTGAGATATTTGAGTACGCTCATTGATCCCTCCTTCTCTAAGAGCTCTATGCTTTCTATGCCTCATTGTAACTTGAGCAATTGTCTCTTTTCAATTCATCAATGACAAATTTTGTTTCTGTTTAAAAAAAAAATGAAGAAATTCATTCCATTTTCTGTTTTCCGAAAACAAGATGCTGATTAATATTGTGCCGACTTGCTTTCCAACCTTCAAACAAAGACATGGCTTTCCAAAGTCTCCATCAGTTTCTTTCCGTTTTCTCCCATAAAATGTAGCATCTTTGGAGATGTGCTACCCCTGCTCTTTTGTGTTGTCTTTGGGAAGAAAGAAATAGTAGGGTGTTTGAAGATAAGTTTGCTTGTTTTGATTCTTCTTGGGCATTTTTTCAGCATACAATCTCTTGGTGGTAGACAAATTACACTAAATTCTTTTGTAATTATAGCCTTCAACCCCCACCCTTGGTCCATCTCTTTTGTGTTTGAATATTTATCTAAAAAAGAGAAAAAAAAAATGAAAGTTGTGGTTTTGCATATACTTATTTTAGAATGTAAATACTCACAATAACTCTAGAATTGAAAAACCAATAATAGGCCTGAACTACCACATGTTATGAACCTGCAGACATATTCTTATCTGCATGGGAATCCCCTGTAAATTGTTGGTTTTAAGCAGGTGCATCCATCATTTCTCCTGGAGCCAAGCAAGGGATTATTCCTCTCGTCATTCCACTGGCAAAAAACATCTCAGGTACATGTTAAAATTTTCTCTTCAAATTGACTCGCTTTTTAGGTGTATGATATCTCATCAAACTAATCTATTCTTGCTCCAAGGTACTACAACTGCACTGTTGCGCTGGCCTACAGCACCCGCTGGGTAAGAAGAATAAACCTTTTATATTTTTCACGCGTGCTTTCCTCCTCCACCTTAATAAACGAGTCTCCTCAGGATGGAGATGCCAGTAGTGGACGTCAATAGGAATGGAGTGTGGCTTCTAGCCAAGAACGTAAGTGAAGCATCTATTATGCAATTGTTTCATGCTATTTCACTTTTTCCATGAAAGTTGTTATCATCCAAAAAAAAAAAAAAAAAAAAGAAGAGAGAAAAATCAATGATGGGAAACTATTTCCTTAGAAATTCTGATATAGATGTTAGTCTTTGATTTGCAGGTTGATCAATTTATTCACAGACTTCTAGTTGAAGAAGATGCCAGAGGAAGTGGAGAGCAAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGGAAGGGGTGATTTTTCTGAATCTCGGATCACAAACTTAGATGGATATCTGCTGAAAAAGGTGCGTGTATAATTTTTCATGGTGCTCCTCTTGATCCTCCTCATCAATGAGGAAATCTATATGCAAGTGTTATCTTCGGCTCCCTATGGTGTCAGGCAAGATGGGCAAGCTCCTTGACCTTCTTGCCTTGATCATCACCTTTTTGGGTGTCACTTAAGGCACACAATGATCAATTTTCTCATATCTTCCACATTACTTCTTGAAAATAAAAGAGAATGGTTTAAGTAATTGTTTATATAAAAAATATATTTATGCATCGTATCTTTTAAAGTATATGTGATCAGTTTAGGTTAAATTATTGAAAATATCTTTGAAATTCATTTGTTCCAAATATACCCTTGAACTTTAGAAAATTTCAATGATGCCCTTACACATTTCCTTAAAAAAAGTAAAAAAAAAAACCTTTACCATTAGATTTTGGATGGAAACCGTTAATACTTTGTTTAAAAATATATTTTTCACCTTGTTTCAAAGATACATTTCTATCCTCTAACTAGAAATTTTATTTTCTTTTTCCTGTTTTCAAGTCTCACTTCAATCAAGTAATACTTTTCAAGCACCTATTGCTTTAAGATAGGACAATGAAAAAAGGTTTATACCATCCCTAATGTATCTTGCTGTGTGATCTGACAATCTTTCTATCCAGGTTGGGTTGTTTCCAGATGTCATAGAACGTAAAATATTGCGCCATTTTGACGAAGGCGACCTTGTAAGGCTGCTGTACTTTGGATACTGCAATACAACAAAGAAGTTTTGCTCCATTTTATATTCATAAATAGTTATTACCGTTGTAGGTTTCAGCTCTGGTAACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCAGGATTTGCACGACCATATGTATTCAATGCAGAGGTTCTGCTGAAGTACGTGGGAAATGTTATTCACTGCTCCAGAATGCTTTGGCTGAGTATACCTAAAGAATCTGTGGTTTCTTGATATTTAGGGTGGGACGAAAAACTGAAGCTAAGGATGCTGCGAGGGGAGCCTTAAAATCACCATGGTGGACCCTTGGCTGTAAGTATGAGGTATTGACTTTCTCATAGATCACTTTTGCATTCTTATTGTTAGCTCCCTTTCTCTGTTTTTAGCCCCCTTGGGAGACGGAAGGGGAATGAGAAAGAGAATAATTATAAAAAGATGATCCCTGTATTAATTGTCGCACATTTCCAGGAGGTTGCTAATATCGCACAATGGGAAGATGAACAAATTGAATATTTCAAAGAAAAGGTCACAGAAGAAGGAAAGCAAGACGATCTCAAGAAGGGAAAGGCTCCTGCGCAGGTTTTATACTGTTCTTTATGAACTACTACGAAATTATGATAGAACCTGAATATATTGAAATATAAACGGTAACTAAACTACAAGATAAACTAAGTAATTCAAGGTACTTGCACCCTTCTAATCTTGAGTCACACTCAAGTCCTAATTCACTAACCAAAATGTTGTCCATGTTCCTCATTCTCCCCCCTCTATTTATAACCAACAAGTATTACAAATTCCCTAACTAATTACCAACATAGTCTTAATACTCTAAAAATACTCTAATACCATTCCTATCATATGAATCTTAAGAAGAGAAAGGCTCCTGCACAGGTTTTATACTCTTCTTTATAGACTACTACGAAATTATCAGACAAAATAACACAGCATTTTTTCGAAATTGTCCCTTTCATTTGAACATTTCATGTTTTCCCTCTTTTGAAGAATATTAAATCAAACAAACTGTTAATTTGTGTTCATATTTGTCATATCAATAATTTGATATTCTATTGTCTTTTTCAAAGTTTAATTTTTTTCAATATTGGGACAACACTACTATTGACACATTGATGAAACATGTGAGATGCCCATTTTCCATAGATGTATAGCAAGGTAGTATTAAAGCTAAGGATGAAGAACGAAAAATTTAGACCTTATTTAGTAACCATTTGGTTTTTGCTTTTCAGTTTTTTAAACTTAAGCTTATAAACATCCTTCACCTCTAAATTTCTTGCTTTGTTATCTACTTTTTACCAATGTTTTCAAAGATTAAGCCAAGTTTTGAAAACTAAAAAAAGTAATTTTTAAAAAAATGTTTTATTTATTTATTTTTTTTTTTAGAAATTGACTAAAAATTCAACTCTTTTACTTAAGAAAGATATAAACCATTGTAAGAAATTGAGAATAAATAAGCTTAAAAACTAAAAATCAAATGGTTATTAAATGGAACTTTATCTATTCGATTAATTTTGTGATTGCTTGTGCAGGTTGCCTTGGACCAAGCTGCCTTTCTGTTGGATCTAGCTTCCGTTGATGGGACTTGGGACAACTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCAGGCCTCCATGAGATTGCAAGATTCGTACTTTATAGAGACTGAATACACATATAAAAAGGCATTTTTCTACTCTCTCCTCTTCGTTTCCATTGTCCTGTTGTTCTCATTCCTTCTTTTTTTACATGTAATTACATATATATATATATTTCTTCGTTACTAAACATCATTCTTTTGTCTCCCCAATGGATTAGATTTTGATCATTTCACTACAAAAATGGGTCAATCAGGAGACATAAAACACTCGAAAGTTTCTCTTGATAATTATAATGGTTCTTTCTATGCAAATGGGAAATGATGGAGAAATACGTTCTAAC AATAAAATGAAAAAAGGGAAATCGGGTATGTCGTTCTCGTACCAATACAACCTCAATTTTACTTCATATTTTGCTCTTAGAAAAAGGAAGCGATAAAAGCTGTTGTCGACGAAGTACACGTAAACTAACGGCTGCAATTTAGCAATCGTGAGCGAATCGTTAGCAAAAGAAAATGAAAACGGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGCTCTCCCCTCACTGCTTTTCCGCCGCCGTGGAGTCACCGTACGCTTCTCTACGTCTTCCTCAACTTCCGAGCATGTATCATTCATCAAAGATATTGCTGCTACTGAGCCTCCTCAGCATCTGTTTCATTTGCTGAAAATGCTGAAGACTAGAGGTGCATCCATCATTTCTCCTGGAGCCAAGCAAGGGATTATTCCTCTCGTCATTCCACTGGCAAAAAACATCTCAGGTACTACAACTGCACTGTTGCGCTGGCCTACAGCACCCGCTGGGATGGAGATGCCAGTAGTGGACGTCAATAGGAATGGAGTGTGGCTTCTAGCCAAGAACGTTGATCAATTTATTCACAGACTTCTAGTTGAAGAAGATGCCAGAGGAAGTGGAGAGCAAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGGAAGGGGTGATTTTTCTGAATCTCGGATCACAAACTTAGATGGATATCTGCTGAAAAAGGTTGGGTTGTTTCCAGATGTCATAGAACGTAAAATATTGCGCCATTTTGACGAAGGCGACCTTGTTTCAGCTCTGGTAACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCAGGATTTGCACGACCATATGTATTCAATGCAGAGGTTCTGCTGAAGGTGGGACGAAAAACTGAAGCTAAGGATGCTGCGAGGGGAGCCTTAAAATCACCATGGTGGACCCTTGGCTGTAAGTATGAGGAGGTTGCTAATATCGCACAATGGGAAGATGAACAAATTGAATATTTCAAAGAAAAGGTCACAGAAGAAGGAAAGCAAGACGATCTCAAGAAGGGAAAGGCTCCTGCGCAGGTTGCCTTGGACCAAGCTGCCTTTCTGTTGGATCTAGCTTCCGTTGATGGGACTTGGGACAACTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCAGGCCTCCATGAGATTGCAAGATTCGTACTTTATAGAGACTGAATACACATATAAAAAGGCATTTTTCTACTCTCTCCTCTTCGTTTCCATTGTCCTGTTGTTCTCATTCCTTCTTTTTTTACATGTAATTACATATATATATATATTTCTTCGTTACTAAACATCATTCTTTTGTCTCCCCAATGGATTAGATTTTGATCATTTCACTACAAAAATGGGTCAATCAGGAGACATAAAACACTCGAAAGTTTCTCTTGATAATTATAATGGTTCTTTCTATGCAAATGGGAAATGATGGAGAAATACGTTCTAAC ATGAAAACGGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGCTCTCCCCTCACTGCTTTTCCGCCGCCGTGGAGTCACCGTACGCTTCTCTACGTCTTCCTCAACTTCCGAGCATGTATCATTCATCAAAGATATTGCTGCTACTGAGCCTCCTCAGCATCTGTTTCATTTGCTGAAAATGCTGAAGACTAGAGGTGCATCCATCATTTCTCCTGGAGCCAAGCAAGGGATTATTCCTCTCGTCATTCCACTGGCAAAAAACATCTCAGGTACTACAACTGCACTGTTGCGCTGGCCTACAGCACCCGCTGGGATGGAGATGCCAGTAGTGGACGTCAATAGGAATGGAGTGTGGCTTCTAGCCAAGAACGTTGATCAATTTATTCACAGACTTCTAGTTGAAGAAGATGCCAGAGGAAGTGGAGAGCAAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGGAAGGGGTGATTTTTCTGAATCTCGGATCACAAACTTAGATGGATATCTGCTGAAAAAGGTTGGGTTGTTTCCAGATGTCATAGAACGTAAAATATTGCGCCATTTTGACGAAGGCGACCTTGTTTCAGCTCTGGTAACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCAGGATTTGCACGACCATATGTATTCAATGCAGAGGTTCTGCTGAAGGTGGGACGAAAAACTGAAGCTAAGGATGCTGCGAGGGGAGCCTTAAAATCACCATGGTGGACCCTTGGCTGTAAGTATGAGGAGGTTGCTAATATCGCACAATGGGAAGATGAACAAATTGAATATTTCAAAGAAAAGGTCACAGAAGAAGGAAAGCAAGACGATCTCAAGAAGGGAAAGGCTCCTGCGCAGGTTGCCTTGGACCAAGCTGCCTTTCTGTTGGATCTAGCTTCCGTTGATGGGACTTGGGACAACTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCAGGCCTCCATGAGATTGCAAGATTCGTACTTTATAGAGACTGA MKTGGGVVCGSPRAAALPSLLFRRRGVTVRFSTSSSTSEHVSFIKDIAATEPPQHLFHLLKMLKTRGASIISPGAKQGIIPLVIPLAKNISGTTTALLRWPTAPAGMEMPVVDVNRNGVWLLAKNVDQFIHRLLVEEDARGSGEQNDELFLAAADAGQKLYGRGDFSESRITNLDGYLLKKVGLFPDVIERKILRHFDEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYFKEKVTEEGKQDDLKKGKAPAQVALDQAAFLLDLASVDGTWDNSVERIAQCYEEAGLHEIARFVLYRD Homology
BLAST of CcUC02G029170 vs. NCBI nr
Match: XP_038900520.1 (protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 669.1 bits (1725), Expect = 2.1e-188 Identity = 330/344 (95.93%), Postives = 338/344 (98.26%), Query Frame = 0
BLAST of CcUC02G029170 vs. NCBI nr
Match: XP_008457752.1 (PREDICTED: uncharacterized protein LOC103497369 [Cucumis melo] >TYJ99513.1 uncharacterized protein E5676_scaffold123G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 665.6 bits (1716), Expect = 2.3e-187 Identity = 329/344 (95.64%), Postives = 337/344 (97.97%), Query Frame = 0
BLAST of CcUC02G029170 vs. NCBI nr
Match: XP_004149691.1 (protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic isoform X1 [Cucumis sativus] >KGN61985.1 hypothetical protein Csa_006132 [Cucumis sativus]) HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186 Identity = 329/344 (95.64%), Postives = 336/344 (97.67%), Query Frame = 0
BLAST of CcUC02G029170 vs. NCBI nr
Match: KAA0045770.1 (uncharacterized protein E6C27_scaffold243G002910 [Cucumis melo var. makuwa]) HSP 1 Score: 661.0 bits (1704), Expect = 5.6e-186 Identity = 329/345 (95.36%), Postives = 337/345 (97.68%), Query Frame = 0
BLAST of CcUC02G029170 vs. NCBI nr
Match: XP_023533903.1 (uncharacterized protein LOC111795609 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 636.3 bits (1640), Expect = 1.5e-178 Identity = 315/344 (91.57%), Postives = 328/344 (95.35%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy Swiss-Prot
Match: Q94JY0 (Protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAB PE=1 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.2e-127 Identity = 224/331 (67.67%), Postives = 271/331 (81.87%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy TrEMBL
Match: A0A5D3BJN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00800 PE=4 SV=1) HSP 1 Score: 665.6 bits (1716), Expect = 1.1e-187 Identity = 329/344 (95.64%), Postives = 337/344 (97.97%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy TrEMBL
Match: A0A1S3C5T9 (uncharacterized protein LOC103497369 OS=Cucumis melo OX=3656 GN=LOC103497369 PE=4 SV=1) HSP 1 Score: 665.6 bits (1716), Expect = 1.1e-187 Identity = 329/344 (95.64%), Postives = 337/344 (97.97%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy TrEMBL
Match: A0A0A0LJE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279220 PE=4 SV=1) HSP 1 Score: 663.3 bits (1710), Expect = 5.5e-187 Identity = 329/344 (95.64%), Postives = 336/344 (97.67%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy TrEMBL
Match: A0A5A7TRJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002910 PE=4 SV=1) HSP 1 Score: 661.0 bits (1704), Expect = 2.7e-186 Identity = 329/345 (95.36%), Postives = 337/345 (97.68%), Query Frame = 0
BLAST of CcUC02G029170 vs. ExPASy TrEMBL
Match: A0A6J1D7C4 (uncharacterized protein LOC111017955 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017955 PE=4 SV=1) HSP 1 Score: 633.6 bits (1633), Expect = 4.7e-178 Identity = 312/344 (90.70%), Postives = 328/344 (95.35%), Query Frame = 0
BLAST of CcUC02G029170 vs. TAIR 10
Match: AT4G34090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-128 Identity = 224/331 (67.67%), Postives = 271/331 (81.87%), Query Frame = 0
BLAST of CcUC02G029170 vs. TAIR 10
Match: AT4G34090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 75 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-126 Identity = 224/332 (67.47%), Postives = 271/332 (81.63%), Query Frame = 0
BLAST of CcUC02G029170 vs. TAIR 10
Match: AT4G34090.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1). ) HSP 1 Score: 444.9 bits (1143), Expect = 5.9e-125 Identity = 216/311 (69.45%), Postives = 261/311 (83.92%), Query Frame = 0
BLAST of CcUC02G029170 vs. TAIR 10
Match: AT2G23370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34090.1); Has 73 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 438.3 bits (1126), Expect = 5.5e-123 Identity = 208/325 (64.00%), Postives = 259/325 (79.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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