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CcUC02G029040 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCTCACTCCTTTTCTTTTCACTACTCCCAGCAGGAGCAGGCCGTTCACAAGCCGTCGAAGAAGGCGGTGGCGCCTCCGCGGCCGACGCAGCCCCAGGTTTATAAGGTGGACCCCATCAACTTCCGGGATGTTGTTCAGAAGCTAACGGCGGCTCCTGAGTTTCAAGATCGCCGCCTTCAAGCCATGCCGGCTCCACGGCCCAATCTCTCCAATCCGCCGCCTCACAATGGGTACTTGGGACAGTCCGCTGAGAGATATTACCATAATTAA ATGGAACCTCACTCCTTTTCTTTTCACTACTCCCAGCAGGAGCAGGCCGTTCACAAGCCGTCGAAGAAGGCGGTGGCGCCTCCGCGGCCGACGCAGCCCCAGGTTTATAAGGTGGACCCCATCAACTTCCGGGATGTTGTTCAGAAGCTAACGGCGGCTCCTGAGTTTCAAGATCGCCGCCTTCAAGCCATGCCGGCTCCACGGCCCAATCTCTCCAATCCGCCGCCTCACAATGGGTACTTGGGACAGTCCGCTGAGAGATATTACCATAATTAA ATGGAACCTCACTCCTTTTCTTTTCACTACTCCCAGCAGGAGCAGGCCGTTCACAAGCCGTCGAAGAAGGCGGTGGCGCCTCCGCGGCCGACGCAGCCCCAGGTTTATAAGGTGGACCCCATCAACTTCCGGGATGTTGTTCAGAAGCTAACGGCGGCTCCTGAGTTTCAAGATCGCCGCCTTCAAGCCATGCCGGCTCCACGGCCCAATCTCTCCAATCCGCCGCCTCACAATGGGTACTTGGGACAGTCCGCTGAGAGATATTACCATAATTAA MEPHSFSFHYSQQEQAVHKPSKKAVAPPRPTQPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPAPRPNLSNPPPHNGYLGQSAERYYHN Homology
BLAST of CcUC02G029040 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]) HSP 1 Score: 125.9 bits (315), Expect = 1.7e-25 Identity = 67/104 (64.42%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of CcUC02G029040 vs. NCBI nr
Match: KAE8651906.1 (hypothetical protein Csa_006780 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23 Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CcUC02G029040 vs. NCBI nr
Match: KAG6605217.1 (hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.3 bits (251), Expect = 4.6e-18 Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of CcUC02G029040 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia]) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15 Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of CcUC02G029040 vs. NCBI nr
Match: KAA8522582.1 (hypothetical protein F0562_013057 [Nyssa sinensis]) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
BLAST of CcUC02G029040 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 8.4e-26 Identity = 67/104 (64.42%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of CcUC02G029040 vs. ExPASy TrEMBL
Match: A0A0A0LPS3 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18 Identity = 56/86 (65.12%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of CcUC02G029040 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.8e-16 Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of CcUC02G029040 vs. ExPASy TrEMBL
Match: A0A5J4ZYQ3 (VQ domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013057 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.4e-10 Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
BLAST of CcUC02G029040 vs. ExPASy TrEMBL
Match: A0A2P5FSD0 (VQ motif containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_033100 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09 Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of CcUC02G029040 vs. TAIR 10
Match: AT2G22880.1 (VQ motif-containing protein ) HSP 1 Score: 41.6 bits (96), Expect = 4.0e-04 Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of CcUC02G029040 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein ) HSP 1 Score: 40.8 bits (94), Expect = 6.8e-04 Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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