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CcUC02G029030 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTTCCAAATTCAAACTAATTTCCCCTCCCCTTACCATGAGTTACTACGACCACCAACAGCCCCCTGTTGGGGCTCCGCCGCCGCAAGGTCAGCCCTAGAATCTCTCCTCTGTTCAAAAGATTTTAATTAAATTTGGTTGTTGATTGATTCATTCATTCATACTTGTTGTAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCGGGGTACCCCGTTCAAGGTTACCCTGCAGCTCAAGGCTACCCTCCGCCACCCCCGCCGCCGCCGGGGTATGGCCCACAGTACGCTCAGCCTCCTCCCAAGAATGAAACAACCGGTTGCCTTGAAGGATGGTTAGTCACTTCCCTCTTTCACTTAATTCCCCAGAATTGGAAAATGGCCCTATCACTGAGATTCTCGAATGTGTTGGGACTTTCATGGAGATTCAACATATTTTTCAAATCATACTTAATTTTTCGCAAAATTTAATCTTTCTAAAATTTAAAAATCATTGTACAATCACCTGAGATCCGTCTGAAAAATCCATTTGGAATTTCAGTTAGTTCTGGTAAGGGTGAGAGATTTCAAAAATTACGGAGGGTTTAATATATGATTTGATAAAGATGGAATTTGGAGAAAATTTGAACAAATATAAGATTTGGAAAATAATTATATTAATATTTAAAAAAAATAATTAGTAGCATACCTCGATGTTAATCCTTTGCACAAGGAAAGTCTAAAAAAACAATTCATAAGACAAAAAGGTTAATTTTTTTTTTTTTTTTTACCAAAGCTTAGTGCCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATGATTTAATTTTGAATTAAATGATCAATTACTAATTGGTAACAAAGTAAGCACTTTCTTTAAACTATTGGTAAGAAACATTGTCAACTTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTGAGTTGGGTGTATTTAAATAAAATGCAACAAATATGGAGGGAAGATAAGATACGTAACATGCTAAACCACAATAAAAATTGACAACGGAATTAAAAATTAGGAAAAATAATATATTTTCAGTCTTTGAATTTTGTGTTTAGTTTTCATTTAGTATTTAAATTTTAAAATATTACATTTTTAATTTTAAAGTTTTGAATTTGATTTCAATTTAGTCTCTAAATTTCAAAATGTTACAAATTTACCCTTCAAATTAACCACAATATATCATTAAATACACACATTTGGTCTGGAGTGTTAAAGTCTATTAATTAATTTAAAACACTAAAACAATTATAATTAACTAAGCCTACTATTTTTTACATCATTTATTATTGAAATTAATTTTAAAATTTCACTTCATAATTTTTTAAATTAATTAATAGATACTAACACCAAATATTGAAGTGAGCATTTAGTGAAAAATTGAAGTTAGAACTTAAAACTATAAATCTTGAAACTCAATGACCAAATTTTAGACAAAAACTCGGTTATTAAGGTTAAAACTGTTACATTTTGAAAACTAGGGATCAAAACTTGATAACTAAAAATATAACATTTTAAAACTTAGCTAGGGATCAAAGTGAAAAGAGTAAATATATATATATATATATATTTTTCACTAAAGACTAAAAATAGGTTAGAGTCGTATCAATTTCAACCCCAAAATAATAATTATATCAATTGAAACTCTAAACTTTTGTAAATGTATCAATTTACACTCTTTTATTACATTTTGCTTAGGAAAAACCCGTGTCAAACTTAAAATTATATCAATTAAACTCCTAAACATTCATAAATGAATCAATTTAGACTCTTAGTTAAAATATTCATTGGAAACTAACATCTGAAGAAATCTACACATGTTTAGGAAACTAATACTAAATTTGTATAATTTAATTAGGAGAATCAAAGTAAATTATTATTTCCATTACTTTTTTTATATTGATATTATTTATTATAATATAATTATTTAAAAATATATATGATTTAAACTTTTTGTGTAAGAATAAATCCTAAGTACATTAATATATAATTTAGGTGATGAAGATTTTTATATAATGGGTTTTATTATTGGAAAAGGAGTGACTGATTGGTAAAATGTATTGTGTGATTATTGTTATGCAGTTTAGCAGCACTTTGTTGTTGCTGTTTGTTGGATGCTTGCTTCTGACAACAAGGATTGGACTATGATTAGTGTACTTATTATCATTCCAATATCATTGTATTAT TTCTTCTTCTTCTTTCCAAATTCAAACTAATTTCCCCTCCCCTTACCATGAGTTACTACGACCACCAACAGCCCCCTGTTGGGGCTCCGCCGCCGCAAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCGGGGTACCCCGTTCAAGGTTACCCTGCAGCTCAAGGCTACCCTCCGCCACCCCCGCCGCCGCCGGGGTATGGCCCACAGTACGCTCAGCCTCCTCCCAAGAATGAAACAACCGGTTGCCTTGAAGGATGGTTAGTCACTTCCCTCTTTCACTTAATTCCCCAGAATTGGAAAATGGCCCTATCACTGAGATTCTCGAATTTTAGCAGCACTTTGTTGTTGCTGTTTGTTGGATGCTTGCTTCTGACAACAAGGATTGGACTATGATTAGTGTACTTATTATCATTCCAATATCATTGTATTAT ATGAGTTACTACGACCACCAACAGCCCCCTGTTGGGGCTCCGCCGCCGCAAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCGGGGTACCCCGTTCAAGGTTACCCTGCAGCTCAAGGCTACCCTCCGCCACCCCCGCCGCCGCCGGGGTATGGCCCACAGTACGCTCAGCCTCCTCCCAAGAATGAAACAACCGGTTGCCTTGAAGGATGGTTAGTCACTTCCCTCTTTCACTTAATTCCCCAGAATTGGAAAATGGCCCTATCACTGAGATTCTCGAATTTTAGCAGCACTTTGTTGTTGCTGTTTGTTGGATGCTTGCTTCTGACAACAAGGATTGGACTATGA MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPQNWKMALSLRFSNFSSTLLLLFVGCLLLTTRIGL Homology
BLAST of CcUC02G029030 vs. NCBI nr
Match: XP_011649307.1 (cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus] >KGN61955.1 hypothetical protein Csa_005974 [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 5.9e-31 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CcUC02G029030 vs. NCBI nr
Match: XP_008457737.2 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 3.8e-30 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CcUC02G029030 vs. NCBI nr
Match: XP_038901964.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa hispida]) HSP 1 Score: 137.9 bits (346), Expect = 5.5e-29 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of CcUC02G029030 vs. NCBI nr
Match: KAG7035191.1 (hypothetical protein SDJN02_01986, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128.6 bits (322), Expect = 3.4e-26 Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of CcUC02G029030 vs. NCBI nr
Match: XP_022947084.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 127.5 bits (319), Expect = 7.5e-26 Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10 Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 47/88 (53.41%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 3.8e-04 Identity = 42/84 (50.00%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-04 Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy TrEMBL
Match: A0A0A0LJA6 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271480 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.9e-31 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy TrEMBL
Match: A0A1S3C5S7 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103497359 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.9e-30 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy TrEMBL
Match: A0A6J1G5R9 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451063 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.6e-26 Identity = 67/87 (77.01%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy TrEMBL
Match: A0A6J1G5U7 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451063 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.9e-23 Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of CcUC02G029030 vs. ExPASy TrEMBL
Match: A0A6J1L666 (cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Cucurbita maxima OX=3661 GN=LOC111499542 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.0e-21 Identity = 59/75 (78.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of CcUC02G029030 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CcUC02G029030 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 60.8 bits (146), Expect = 8.0e-10 Identity = 47/88 (53.41%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of CcUC02G029030 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07 Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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