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CcUC02G028980 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCACCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCAGGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTTGTCGCTGGAGTCCGCCGGTGGTAG ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCACCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCAGGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTTGTCGCTGGAGTCCGCCGGTGGTAG ATGGAACCCTCTTCTTCTCCCACTTTCCTCTCTAATTCCAACCCTCCTCTTAGCTCCTCCGAATCAGAATTCTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCGGACTCCCCCTCGCCGCCACCCTCCGCCGTCGCCGCCCCCCTCCACTGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCCTACCTTCAGCCCATGCTCAGGCCGCCCGTCGCCGGCGACCGTACCTTCATGCGCAGGCTCAAGAAGCACGGTTTCGGATGCATCGAGTGGCTCGCCGCTGTTGTCGCTGGAGTCCGCCGGTGGTAG MEPSSSPTFLSNSNPPLSSSESEFSDIEMTPLQSYTSLKDLLPDSPSPPPSAVAAPLHCPAWDELPIKNPLVKHAALAYLQPMLRPPVAGDRTFMRRLKKHGFGCIEWLAAVVAGVRRW Homology
BLAST of CcUC02G028980 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44 Identity = 100/119 (84.03%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of CcUC02G028980 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba]) HSP 1 Score: 101.3 bits (251), Expect = 6.0e-18 Identity = 65/120 (54.17%), Postives = 75/120 (62.50%), Query Frame = 0
BLAST of CcUC02G028980 vs. NCBI nr
Match: XP_021810412.1 (uncharacterized protein LOC110753763 [Prunus avium]) HSP 1 Score: 101.3 bits (251), Expect = 6.0e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. NCBI nr
Match: PQQ14465.1 (uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 101.3 bits (251), Expect = 6.0e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 100.9 bits (250), Expect = 7.8e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 3.1e-36 Identity = 88/117 (75.21%), Postives = 93/117 (79.49%), Query Frame = 0
BLAST of CcUC02G028980 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18 Identity = 65/120 (54.17%), Postives = 75/120 (62.50%), Query Frame = 0
BLAST of CcUC02G028980 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.8e-18 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of CcUC02G028980 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04 Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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