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CcUC02G028970 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATCATGCACTTTATGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCAAAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGCCAAAACCGAGCTTGGATTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTATCAAAATACCGTCTCCATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAAATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGACCGGAACAGGAGGGGATCAGAAAGAAGCAAGTAATCCCTTACCTAGTCAACTGGTCAATCTGTCTACGATTTTCGGATCGTGTTCGTGAACCTAGAAAGCACTTTGAGAATTACTCCTCGGAAATGACTGAAAGACTGGCCTACGACCCTTCACAGAAAAAGGGTCTCTGCTTCAAGGAATTTCAGATAAGTCTTTGGTTTGACAAGGGAATGGCAGTTGTTAGAGTGGTAAAGACAAGGGACGAGAGAAACGGTCATGCTTCAAAGTGGAACAAAACGGATTGGTTCGAGTTTCTATGAGTCGACAGGAGAAGCACCGCTCAATGATTCCCCTGTATGAATGTCGACTTGATGATGCAAAGTAGAGGGGACCGCTTCTCTGGCATGAATCCATGGCCTTCCAAGTAGCAGGTTGAAGGAAGTCGGGATGTCTAGTACCTGGAATTTTCAACTAAACTACACAACAATGGGGCGGCCAAGAACAACTACGGTAGAGCGGTTTATGTATGAATGTCTCCCGGTGGACTTTCTTCTTTCTTTTACAAAAGAGGAAGAAACTTCTCATATCGTTGGAGAGGTTCTTTGTGCCAAAGCCATTTATAAGCCCTCAAGTAGGTAACCCCGAAGGAAGTCGATCTATCGATTACGTTCATCTCATAAAGATGTTCCTTTTCACTCCTAAATGAAAGCTAAACTAAACGACAATAACATAACTCCTAGCGCAAAAGAGTAGTCGCTGTGATGCCTATGCTATTTTCTTTCCTATAGAGCTTGGGCCCACGCACAAACTCCTATCGAAAAGCTAGTAAGTAGCCTTTTTGTTTCTATAGCTTCAAAGCCAAAGAGGAAGTTTCTTCTGATTGGAAGGTTTCCGCTGTAGCAGTAAAGAAGAAGGAAATTTCTGCTGCTAAAATCAGAGTTGTTTCAATACCAAAGGAGTGAACTTCACTAGAAAGGTTATAGAAGTGCAGAACTTCTTTCTATAAAATGAAAGAAATTCAAAAGGTTTTTCGATCCCAGGGGGTGGAGATCCATAATAGACATATCGAAATTATTGTACGTCAAATAACATCAAAAGTGTTGGTTTCAGAAGATGGAATGTCTAAAGTTTTTTCACCTGGAGAACTCATTGGATTGTTGCGAGCGGAACGAATAGGGCGTGCTTTGGAAGAAGCGATCTGTTACCAAGCCATATTATTGGGAATAACGAAAGCATCTCTAAATACTCAAAGTTTCATATCGGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCCGCCCTCCTAGTTTAGAGGTTTGAAAGAGAACGTTGTTCTAGGAGGAATGATACCTGTTGGTACCGGATTCAGAGAATTAGCGCACCGTTCGAGGCAACATAACAATATTCCTTTAGAAACCCAAAAAAAAATGTTTTCGAGGGGGAAATGAGAGATATTTTGTTCCACCACAAAGAATTATTTGATTTTTGCATTTCAACGAATTTACATGATACATCAAAACAAGCATTTCTAGGATTTAATGATTCATAAAAGTGGAGTCATCCTGTTAACTAGCCGCGTTGATTTGGTAATAAGATAATAACAAATAGAAAAAAATTAATGGCTTGGATCGTGTATCAACAGTCAATCCCCGGTCGAGGTAGAGGATAAGGTTCCATGGGAACAATTATTTATTTCTATTTCAGCTCGTCTCTTTTCTTTAAGAAAAAAGCGAGGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACTTAATGGTATTCATATTCTAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGAGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGAGGTTACCCGATATTGTAATAATCGTTGATCAACAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTGGAATTAAACAAAATTCAAATCTCAAGGGTAAAATTGTGAAATTTTGAAATGTAGGGACTAAATTGAAATAAAACTCAAAACTTAAGGAGTAAGGGGTTGTGTGGGAGTTGAGTTGGTTATTATAATATATATGTTGGTTGTAAACTATTTTAGCATGTGTTACAAATTAGGGGAGAGAATGGTCACCAAATAGTAAACACTATAGACAATGAAATTTCGCAAATAGTTTTACTGTAGACAAATGTGAGTTATACTAATTGGGAACTTCAACTATCATAATAAAAGACCCAAATATTGACCGGGCTATAATAGCCCACTCCACCCAAGGCAAGTTGTGGGCCAAAATGTTCCCTAAATGTGTATCATTTGAAACCTATGAACCAAATTGAAACTAAACCTGAAAGTTAGGGACTAAAAAGGTAATTTATCCTAATTTTTTATTGAAAAATATTTAATTAATAAAATATTGTTTAAAAATACTTGTAGCCTCTAAACTTTCACGAAAGTAACAATTTAGTCTCTGAACTTTGGTTTGTAATAATTTAGTTCATATACTTTCAATTTTGTAATAATTTAATCCCCACAATATAGTATGTAACAATTTAGTCCTTGTACTTTTAAATTTGTACCAACTTAGTCTCCAATGTAAAAAATTCATCAAAATTAGATATTAATTTTTATTATATTGTGATGTAGACTTTGTATTTTATAAAAACATTGAGTTTCTAATTAGTTTATCGGTTTATTTATACAAGGAATCACAAAACACTAATTTCTACAATAGAGGCTTATTACAAAATTTAAAGTATAAGAACTAAATTATTACATAATAAAGTTTAGAGATTAAATTATTTCAAAATCAAAAGTATATGGACTAAATCGTTACAAATAAAAGTTCAAAAACTAAATTATTACTTCCCTAAAAATTTAGGGACTAAAAGGTAATTTTAACCTTAAAATATTTAGTTCAACGAAGAATCCAACTAATAACTCACAACAACATTCCTTTTAGATTTTTGAGTAGTTGAGCAAAGAGAGAATCATATGTAGAAAGCCCATGTGGAGTAGTGTAGTACATAAGTAAGCCACATGTAGCCAAAAAAGAGCAAGCAACACTTTTGTCTTGTGAAGGTTGGGCTCCACTTCAAAGAAATGAGCCCAACCCAAAGAAAGTCACTGTTTTTTACAACTCTATAGTCCAAACATAAACTTATAAACTTATTTATTATTTGTAGGATTTTAAGCATGGATTAAATATTTAT TCAAATCATGCACTTTATGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCAAAGATGTAGTGGCTGATTCAGCCAAAACCGAGCTTGGATTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTATCAAAATACCGTCTCCATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAAATGGACAAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACTTAATGGTATTCATATTCTAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGAGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGAGGTTACCCGATATTGATTTTAAGCATGGATTAAATATTTAT TCAAATCATGCACTTTATGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCAAAGATGTAGTGGCTGATTCAGCCAAAACCGAGCTTGGATTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTATCAAAATACCGTCTCCATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAAATGGACAAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACTTAATGGTATTCATATTCTAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGAGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGAGGTTACCCGATATTGATTTTAAGCATGGATTAAATATTTAT SNHALYESLIKERAAARFNDLVGSKDVVADSAKTELGLKKEQDVSFVPSRRSENKEIVNIFKIITYYQNTVSIHPISSDPGCDMVPKDEMDKMMEAGVHFGHGTRKWNPRMAPYISAKLNGIHILNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTRLPDIDFKHGLNIY Homology
BLAST of CcUC02G028970 vs. NCBI nr
Match: ALO21915.1 (ribosomal protein S2 [Cucurbita cordata] >ALO22021.1 ribosomal protein S2 [Cucurbita digitata]) HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80 Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CcUC02G028970 vs. NCBI nr
Match: YP_009439967.1 (ribosomal protein S2 [Gynostemma pentagynum] >ATG86838.1 ribosomal protein S2 [Gynostemma pentagynum]) HSP 1 Score: 308.9 bits (790), Expect = 4.0e-80 Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. NCBI nr
Match: YP_010119723.1 (ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [Hemsleya zhejiangensis]) HSP 1 Score: 308.1 bits (788), Expect = 6.8e-80 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. NCBI nr
Match: AHM88761.1 (ribosomal protein S2, partial [Lagenaria siceraria]) HSP 1 Score: 308.1 bits (788), Expect = 6.8e-80 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. NCBI nr
Match: YP_009439880.1 (ribosomal protein S2 [Gynostemma caulopterum] >YP_009468850.1 ribosomal protein S2 [Gynostemma compressum] >ATG86751.1 ribosomal protein S2 [Gynostemma caulopterum] >AVA29842.1 ribosomal protein S2 [Gynostemma compressum]) HSP 1 Score: 308.1 bits (788), Expect = 6.8e-80 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.7e-81 Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy Swiss-Prot
Match: B1A924 (30S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.4e-80 Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy Swiss-Prot
Match: A0ZZ24 (30S ribosomal protein S2, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps2 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.4e-80 Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy Swiss-Prot
Match: Q2L8Z6 (30S ribosomal protein S2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps2 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.4e-80 Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 7.1e-80 Identity = 144/155 (92.90%), Postives = 148/155 (95.48%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy TrEMBL
Match: A0A0S2IEQ7 (Ribosomal protein S2 OS=Cucurbita digitata OX=200225 GN=rps2 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 5.1e-81 Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy TrEMBL
Match: A0A0S2IEC8 (Ribosomal protein S2 OS=Cucurbita cordata OX=1094862 GN=rps2 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 5.1e-81 Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy TrEMBL
Match: A0A291IAX6 (30S ribosomal protein S2, chloroplastic OS=Gynostemma pentagynum OX=555432 GN=rps2 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.9e-80 Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy TrEMBL
Match: A0A1P8LE54 (Ribosomal protein S2 OS=Citrullus mucosospermus OX=519315 GN=rps2 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 3.3e-80 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. ExPASy TrEMBL
Match: A0A2Z2CQF0 (30S ribosomal protein S2, chloroplastic OS=Coccinia grandis OX=387127 GN=rps2 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 3.3e-80 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CcUC02G028970 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 ) HSP 1 Score: 288.5 bits (737), Expect = 5.2e-78 Identity = 138/156 (88.46%), Postives = 146/156 (93.59%), Query Frame = 0
BLAST of CcUC02G028970 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-23 Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of CcUC02G028970 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-23 Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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