CcUC02G028740 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G028740
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RAC-like GTP binding protein 5
Location	CicolChr02: 23426660 .. 23430261 (+)
RNA-Seq Expression	CcUC02G028740
Synteny	CcUC02G028740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAATAACAACCAAAGAGAATACCTTTCTTTAAAGATGAGATTGAGAATTGAGAAAATTAGTTGAAACAAAAGAAGAAAAAAGTTGCCCAAAAGTGGGTGCGAGCCTGAGAGAGACCGAGAGCGACAAGTTTCACCTTCAACATCCATTGATTAGTAAAAATTTCCCAATTTTCATCAACCCCAAATCGGTAGAATCAAAAAAGGGTTCTTCAATTTCAATTTTCAGACCCTGATTTTTACTCTGCCATAGATAGCTGGCCAAGAGCTGGCCTCTTCTCTCCCCTCTTTATAGACCCAGTTCCCTTGTCTTTGTGACTCTCCTTCTCTCTTCCACGGGTACAATTTCTTTGTAATCCTTCGTAAATGTGCCTAGATTTGTGGGTCAACTCCACTATTGTCTCTTTTTCTCTTGGTGTTTCTGTTTCTGCATTGTGAGACTTTTGAAACGAAGCCCTGAAGGAAGAAATGAGTGTTTCCAGGTTTATTAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACCTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACGGTCAGCTACTTCAAGCCTTAACACGACCCTTCTGTTCTTTTTCTTGTTTGGTTCCTGAGAAATTTTGGGTGATTTAGTTAGTTCTAAGAGGGGTTTCTTGTTTTTTAGTGATGGACTTCAGTTTCAGCATTTCTTAAGCTGAGATTGCTTGTTTCTTTACTGGGTTTTGTGCACTTTGCTTTTTGTTTCAGTTTCCTTTCTTAAGCTCTTTGGTATTTGTGTTCTTGGTTTTGGGAGCATACATTTGTTGCTGTTGTGTTTTTGTTTGCATGCTTTACCAATCGAAGCAAAGAAAATTTCCATCTACATGTTTGGTGGAACATGAATCTCTTGGAGTTGCAGATTCTGTTTAGTAATTCAACCTCTATTCAGATTATTAGTTATTGCAGGAAGATCCCAAAAGAGATGATTAAAATTCTGGTCTTTTGATCAGGTTTTCCCTCTTCCAACAAAAATGGGGAGGGAATTATGGTTTCATTTTCTTTTTTTTTTTTTCTATCAATTTCTTGCTCTTTATGACTAGTTGTTTTCTGTTTAAAGTACACTTGTCTTTGTGTAGTCATGTGGGAAACACTTGTCTTTGTGTAGTCATGTGGCCATCCCAACATTTTGGTGTAAACATTTCCTGATCCTCCATATAACTCTATTTTTGCCTGGTATCAGATCTCCATTCGTCTCTGTGCATGTGTGAGTTGGGGAACAGTGTTGCAATGTAGAAATCTTGATAGTTTATCTGCATCGGTTGTCTTCCATTTCAAAAATTGTGCAATATGGTATCTGATTTGAAGATTGTAACTCTTTATATAGACAAGGTTTTGCATGCTTTTGATTCTGAAATTGATACACAAATTTTGTGAGATTGTTATCCATCTGTGGTGACTAGTGAATACTATGAAACAGGATTATGTTCCAACTGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGCACAGTCAACCTAGGCTTGTGGGATACTGCTGGTATGTCCAAAACAAGTCGTTACTTAACTTGCCTTCTTGCTGAGATTCTGATGCATGAATCATAAATCAGGCCAGGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAAGTAAGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATAAATCAGGCCAGGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAAGTAAGCTTGTGCTTTATCTTTGTCGGTTGAACTTATATTGCATTCTTTTTTATGTCTCTGGTTCCTGTTTTACCTAATATACTTCTTTCTCATCACAGTGGATTCCTGAGCTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTTGGTTATATTCTTCACCACCTTTCTAGTTTTTAAGCGTAGCATTTGAAACTACCCGTCTTTTCCCATTTGTTTGCTAGTGATTGTTCCTAAATTGAATTAACTCACCATGATGAATCTGTTTCTTTAAGAACAAGAAAAAACCTCACCATGATGAACAGGATGGAACAGAATGATAATTAGATAAACGACCTTCCAGGATCTGTTCTATAAGTTGTACAAATGTGTCTTTGAGTTCTAAGATTGGGTGGTAGTTGATATGGTTTATTCTACCTAAGCAACAGACCAGACTACTTGTTATGTAATGAAAATACGGTTATTATTCTGGATTTGGCTTATTGAGTATCATAGTCGACTAGCTTGTGCTATACTAGACAGTACACCTGGACGAAATCCAAGCACCATCTTTAATTGACCTGACCCTCTCGGAAAAGTAGTCTATTTTTATTATTATTTTAATAGAAGTATTGTATTATTATGAGCTCTCGTTGTGGGATTATCAGTAATCGTGAGCGTTAACTTGCTTTGTGTAGATCTTCGAGAAGATAAACAGTTCCTAAACGAACACCCAGGGATCGTCCCAATTACCACAGCTCAGGTATCCTGCAATATACCTATATTTACGAGTTCCATACTACAAAATTATTGCGGCGTCATAGTTTTCTTCGTCTTTTATAGTCTGATTTAGTTATGTTCTCATCTTTCTATAGTTTAAGATTTCAACTCTCCTTGCAGGGGGAGGAACTGAGAAAACTCATTGGAGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAGTATGAAGAATCCACTTTCTTCTTTCTATACTTTCTCAAGTCCCTCACTCCTTAACAAGTTCTTTTCGTTTATCATCCGAATGCAGAATGTGAAAGCAGTCTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGTAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCTTGTTCTATATTGTGATGCAAAATTAGTTGTATCATGACCGGTTAGAATTCGAGAACCTAATAGTAAGCTATTCATCATTTAGCCCCTAACTATCACTATATGAGTTATATTTTCCACATTGTCCTTAACACAACCCCATGATCAAGCAGCAGATCTCATCCTCTGCTTGCCTGCTTTCTGGGCTGTGCTATGATTTGTAAAAAATGGTTTAAAGTCATCTATTTGTAATATGCATAATGATAGTATATGTTCGAGTTTCAATATATTTTACGTAACTGATTCTCGAGTTAGTATCAATGTAACTATGTATGTCGTCCTGCTTCAATATATTGTAATGTTCTTGGATGCTTTTTGTCTACCAGTTGGTTAGAATCATCTTTCCATAGAGTTGGGTGACTGTAGAACAGTCTATGGATTTGGAGTAATGTTGACTCAACAATATATATAGGCTTGTAATGTGAATTGATTTTCTACCATTAGTTTGTATGTAATATTGGG

mRNA sequence

AAAAAAAGAAAAATAACAACCAAAGAGAATACCTTTCTTTAAAGATGAGATTGAGAATTGAGAAAATTAGTTGAAACAAAAGAAGAAAAAAGTTGCCCAAAAGTGGGTGCGAGCCTGAGAGAGACCGAGAGCGACAAGTTTCACCTTCAACATCCATTGATTAGTAAAAATTTCCCAATTTTCATCAACCCCAAATCGGTAGAATCAAAAAAGGGTTCTTCAATTTCAATTTTCAGACCCTGATTTTTACTCTGCCATAGATAGCTGGCCAAGAGCTGGCCTCTTCTCTCCCCTCTTTATAGACCCAGTTCCCTTGTCTTTGTGACTCTCCTTCTCTCTTCCACGGGTACAATTTCTTTGTAATCCTTCGTAAATGTGCCTAGATTTGTGGGTCAACTCCACTATTGTCTCTTTTTCTCTTGGTGTTTCTGTTTCTGCATTGTGAGACTTTTGAAACGAAGCCCTGAAGGAAGAAATGAGTGTTTCCAGGTTTATTAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACCTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACGGATTATGTTCCAACTGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGCACAGTCAACCTAGGCTTGTGGGATACTGCTGGCCAGGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAAGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAGCTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTTGATCTTCGAGAAGATAAACAGTTCCTAAACGAACACCCAGGGATCGTCCCAATTACCACAGCTCAGGGGGAGGAACTGAGAAAACTCATTGGAGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTCTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGTAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCTTGTTCTATATTGTGATGCAAAATTAGTTGTATCATGACCGGTTAGAATTCGAGAACCTAATAGTAAGCTATTCATCATTTAGCCCCTAACTATCACTATATGAGTTATATTTTCCACATTGTCCTTAACACAACCCCATGATCAAGCAGCAGATCTCATCCTCTGCTTGCCTGCTTTCTGGGCTGTGCTATGATTTGTAAAAAATGGTTTAAAGTCATCTATTTGTAATATGCATAATGATAGTATATGTTCGAGTTTCAATATATTTTACGTAACTGATTCTCGAGTTAGTATCAATGTAACTATGTATGTCGTCCTGCTTCAATATATTGTAATGTTCTTGGATGCTTTTTGTCTACCAGTTGGTTAGAATCATCTTTCCATAGAGTTGGGTGACTGTAGAACAGTCTATGGATTTGGAGTAATGTTGACTCAACAATATATATAGGCTTGTAATGTGAATTGATTTTCTACCATTAGTTTGTATGTAATATTGGG

Coding sequence (CDS)

ATGAGTGTTTCCAGGTTTATTAAGTGTGTTACGGTTGGTGATGGTGCTGTTGGGAAAACCTGTATGCTTATCTCCTACACCAGCAACACTTTCCCCACGGATTATGTTCCAACTGTTTTCGACAATTTTAGTGCAAATGTAGTTGTGGATGGCAGCACAGTCAACCTAGGCTTGTGGGATACTGCTGGCCAGGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAAGAAGATTACAATAGATTGAGACCTTTGAGCTACCGTGGAGCAGATGTATTTCTGTTAGCATTCTCTCTCATAAGCAGGGCTAGCTACGAAAATGTCGCCAAAAAATGGATTCCTGAGCTAAGGCATTATGCTCCTGGTGTACCAGTTATTCTCGTCGGGACTAAGCTTGATCTTCGAGAAGATAAACAGTTCCTAAACGAACACCCAGGGATCGTCCCAATTACCACAGCTCAGGGGGAGGAACTGAGAAAACTCATTGGAGCCCCAGTTTACATTGAATGCAGTTCGAAAACACAGCAAAATGTGAAAGCAGTCTTCGACGCAGCAATCAAAGTGGTTCTCCAGCCTCCAAAGCGTAAGAAGCGAAAGAAGAGAAAGGCACAGAAGGCTTGTTCTATATTGTGA

Protein sequence

MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL

Homology

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BLAST of CcUC02G028740 vs. NCBI nr
Match: KAF5200284.1 (Ras-like gtp-binding protein rho [Thalictrum thalictroides])

HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 214/256 (83.59%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKK--------------------- 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKK                     
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 --EDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDL 180
             EDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVP+ILVGTKLDL
Sbjct: 121 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL 180

Query: 181 REDKQFLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPK 234
           R+DKQF  +HPG VPITT QGEEL+KLIGAP YIECSSKTQQNVKAVFDAAIKVVLQPPK
Sbjct: 181 RDDKQFFVDHPGAVPITTVQGEELKKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPK 240

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BLAST of CcUC02G028740 vs. NCBI nr
Match: XP_004147042.1 (rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_008457692.1 PREDICTED: rac-like GTP-binding protein RAC1 [Cucumis melo] >XP_011649289.1 rac-like GTP-binding protein RAC1 [Cucumis sativus] >KAA0045737.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa] >KGN61933.1 hypothetical protein Csa_006714 [Cucumis sativus] >TYJ99544.1 rac-like GTP-binding protein RAC1 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 2.9e-101
Identity = 197/233 (84.55%), Postives = 198/233 (84.98%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+LNEHPGIVPITTAQGEE
Sbjct: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of CcUC02G028740 vs. NCBI nr
Match: KAG7027016.1 (Rac-like GTP-binding protein RAC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.3 bits (970), Expect = 4.9e-101
Identity = 193/233 (82.83%), Postives = 203/233 (87.12%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAG                +++  F   S     +   +EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGMFK-----------TSLYITCFLAESLMCMSHEPGQEDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+L EHPG+VPITT+QGEE
Sbjct: 121 SLISKASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 222

[Close]

BLAST of CcUC02G028740 vs. NCBI nr
Match: XP_038902146.1 (rac-like GTP-binding protein RAC1 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.7e-99
Identity = 194/233 (83.26%), Postives = 195/233 (83.69%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+L EHPGIVPITTAQGEE
Sbjct: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGIVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRK QK CSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKGQKTCSIL 198

[Close]

BLAST of CcUC02G028740 vs. NCBI nr
Match: XP_022947397.1 (rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like GTP-binding protein RAC1 [Cucurbita maxima] >XP_023533345.1 rac-like GTP-binding protein RAC1 [Cucurbita pepo subsp. pepo] >KAG6604937.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371.7 bits (953), Expect = 4.6e-99
Identity = 192/233 (82.40%), Postives = 197/233 (84.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+L EHPG+VPITT+QGEE
Sbjct: 121 SLISKASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLIEHPGVVPITTSQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQK+CSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKSCSIL 198

[Close]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot
Match: O04369 (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96
Identity = 182/233 (78.11%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVF+LAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFILAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYEN+AKKWIPELRHYAPGVP+ILVGTKLDLR+DK FL +HPG VPITTAQGEE
Sbjct: 121 SLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQPPK+KK KKR+AQK+CSIL
Sbjct: 181 LRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPKQKK-KKREAQKSCSIL 197

[Close]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-96
Identity = 176/233 (75.54%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SL+S+ASYENV+KKW+PELRHYAPGVP+ILVGTKLDLR+DKQF  EHPG VPI+TAQGEE
Sbjct: 121 SLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           L+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 LKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 348.2 bits (892), Expect = 7.2e-95
Identity = 180/233 (77.25%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENV+KKWIPELRHYAPGVP+ILVGTKLDLR+DKQF  +HPG VPI+TAQGEE
Sbjct: 121 SLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGA  YIECSSKTQQN+KAVFDAAIKVVLQPPK+KK KK+KAQK C+IL
Sbjct: 181 LRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKK-KKKKAQKGCAIL 197

[Close]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-94
Identity = 179/233 (76.82%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVF+LAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFILAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENV+KKWIPEL+HYAPGVP++LVGTKLDLR+DKQF  +HPG VPITTAQGEE
Sbjct: 121 SLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAP YIECSSKTQQNVKAVFDAAIKVVLQPPK KK KK KAQKACSIL
Sbjct: 181 LRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPKTKK-KKSKAQKACSIL 197

[Close]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot
Match: Q35638 (Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.9e-94
Identity = 178/233 (76.39%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVF+LAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFILAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENV+KKWIPEL+HYAPGVP+ILVGTKLDLR+DKQF  +HPG VPITTAQGEE
Sbjct: 121 SLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLI AP YIECSSK+QQNVKAVFDAAI+VVLQPPK+KK KK KAQKACSIL
Sbjct: 181 LRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQPPKQKK-KKSKAQKACSIL 197

[Close]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL
Match: A0A7J6WSD2 (Ras-like gtp-binding protein rho OS=Thalictrum thalictroides OX=46969 GN=FRX31_010130 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 214/256 (83.59%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKK--------------------- 120
           TAGQEDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKK                     
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 --EDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDL 180
             EDYNRLRPLSYRGADVFLLAFSLIS+ASYENVAKKWIPELRHYAPGVP+ILVGTKLDL
Sbjct: 121 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL 180

Query: 181 REDKQFLNEHPGIVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPK 234
           R+DKQF  +HPG VPITT QGEEL+KLIGAP YIECSSKTQQNVKAVFDAAIKVVLQPPK
Sbjct: 181 RDDKQFFVDHPGAVPITTVQGEELKKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPK 240

[Close]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL
Match: A0A0D3E376 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.9e-105
Identity = 205/301 (68.11%), Postives = 223/301 (74.09%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAK---------------------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLIS+ASYENV+K                      
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELTHYAPGVPIVLVGTKL 120

Query: 121 ----------------------------------------------KEDYNRLRPLSYRG 180
                                                         KEDYNRLRPLSYRG
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQNVKGVFDAAIRVVLQPPKQKKKKGKEDYNRLRPLSYRG 180

Query: 181 ADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVP 234
           ADVF+LAFSLIS+ASYENV+KKWIPEL HYAPGVP++LVGTKLDLR+DKQF  +HPG VP
Sbjct: 181 ADVFILAFSLISKASYENVSKKWIPELEHYAPGVPIVLVGTKLDLRDDKQFFVDHPGAVP 240

[Close]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL
Match: A0A1S3C7E5 (rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 197/233 (84.55%), Postives = 198/233 (84.98%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+LNEHPGIVPITTAQGEE
Sbjct: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL
Match: A0A5D3BKK0 (Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001120 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 197/233 (84.55%), Postives = 198/233 (84.98%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+LNEHPGIVPITTAQGEE
Sbjct: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL
Match: A0A0A0LJG3 (Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 197/233 (84.55%), Postives = 198/233 (84.98%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQ+LNEHPGIVPITTAQGEE
Sbjct: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQYLNEHPGIVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL
Sbjct: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 198

[Close]

BLAST of CcUC02G028740 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 176/233 (75.54%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SL+S+ASYENV+KKW+PELRHYAPGVP+ILVGTKLDLR+DKQF  EHPG VPI+TAQGEE
Sbjct: 121 SLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           L+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 LKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of CcUC02G028740 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 176/233 (75.54%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SL+S+ASYENV+KKW+PELRHYAPGVP+ILVGTKLDLR+DKQF  EHPG VPI+TAQGEE
Sbjct: 121 SLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           L+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 LKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of CcUC02G028740 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 176/233 (75.54%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVFLLAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFLLAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SL+S+ASYENV+KKW+PELRHYAPGVP+ILVGTKLDLR+DKQF  EHPG VPI+TAQGEE
Sbjct: 121 SLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           L+KLIGAP YIECS+KTQQNVKAVFDAAIKVVLQPPK KK+KKRK+QK CSIL
Sbjct: 181 LKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKKKRKSQKGCSIL 198

[Close]

BLAST of CcUC02G028740 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 344.4 bits (882), Expect = 7.4e-95
Identity = 176/233 (75.54%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVF+LAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFILAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENV+KKWIPEL+HYAPGVP++LVGTKLDLR+DKQF  +HPG VPITTAQGEE
Sbjct: 121 SLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           LRK IGAP YIECSSKTQ+NVKAVFDAAI+VVLQPPK+KK KK KAQKACSIL
Sbjct: 181 LRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQKK-KKSKAQKACSIL 197

[Close]

BLAST of CcUC02G028740 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-94
Identity = 175/233 (75.11%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 1   MSVSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKEDYNRLRPLSYRGADVFLLAF 120
           TAGQ                                   EDYNRLRPLSYRGADVF+LAF
Sbjct: 61  TAGQ-----------------------------------EDYNRLRPLSYRGADVFILAF 120

Query: 121 SLISRASYENVAKKWIPELRHYAPGVPVILVGTKLDLREDKQFLNEHPGIVPITTAQGEE 180
           SLIS+ASYENV+KKWIPEL+HYAPGVP++LVGTKLDLR+DKQF  +HPG VPITTAQGEE
Sbjct: 121 SLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEE 180

Query: 181 LRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKRKKRKKRKAQKACSIL 234
           L+KLIGAP YIECSSKTQ+NVK VFDAAI+VVLQPPK+KK KK KAQKACSIL
Sbjct: 181 LKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQPPKQKK-KKSKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of CcUC02G028740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5200284.1	3.5e-115	83.59	Ras-like gtp-binding protein rho [Thalictrum thalictroides]	[more]
XP_004147042.1	2.9e-101	84.55	rac-like GTP-binding protein RAC1 [Cucumis sativus] >XP_008457691.1 PREDICTED: r...	[more]
KAG7027016.1	4.9e-101	82.83	Rac-like GTP-binding protein RAC1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038902146.1	2.7e-99	83.26	rac-like GTP-binding protein RAC1 [Benincasa hispida]	[more]
XP_022947397.1	4.6e-99	82.40	rac-like GTP-binding protein RAC1 [Cucurbita moschata] >XP_022971108.1 rac-like ...	[more]

BLAST of CcUC02G028740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04369	2.2e-96	78.11	Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1	[more]
Q38912	2.2e-96	75.54	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]
Q6EP31	7.2e-95	77.25	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q39435	1.2e-94	76.82	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
Q35638	7.9e-94	76.39	Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1	[more]

BLAST of CcUC02G028740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6WSD2	1.7e-115	83.59	Ras-like gtp-binding protein rho OS=Thalictrum thalictroides OX=46969 GN=FRX31_0...	[more]
A0A0D3E376	7.9e-105	68.11	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1	[more]
A0A1S3C7E5	1.4e-101	84.55	rac-like GTP-binding protein RAC1 OS=Cucumis melo OX=3656 GN=LOC103497331 PE=3 S...	[more]
A0A5D3BKK0	1.4e-101	84.55	Rac-like GTP-binding protein RAC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LJG3	1.4e-101	84.55	Rac-type small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_2G270750 PE...	[more]

BLAST of CcUC02G028740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35020.1	1.6e-97	75.54	RAC-like 3	[more]
AT4G35020.2	1.6e-97	75.54	RAC-like 3	[more]
AT4G35020.3	1.6e-97	75.54	RAC-like 3	[more]
AT3G51300.1	7.4e-95	75.54	RHO-related protein from plants 1	[more]
AT2G17800.1	1.6e-94	75.11	Arabidopsis RAC-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.14 coord: 190..212 score: 34.52 coord: 47..69 score: 49.26 coord: 7..28 score: 44.74
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..215 e-value: 1.1E-17 score: 74.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..215 e-value: 1.1E-14 score: 64.8
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 98..233 coord: 1..98
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..212 score: 25.228888
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..233 score: 18.79093
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..213 e-value: 1.15538E-128 score: 358.775
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..215 e-value: 1.8E-100 score: 349.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..98 e-value: 1.5E-32 score: 112.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..233 score: 17.00988
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 98..233 e-value: 8.5E-41 score: 141.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..97 e-value: 5.9E-38 score: 132.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 97..213
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..98
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 99..206 e-value: 2.7E-12 score: 44.7 coord: 7..97 e-value: 3.3E-23 score: 80.2
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 98..233 coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G028740.1	CcUC02G028740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity