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CcUC02G028330 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTGACCACCTTTCAGACCATACCAAATTCTACTTCTTTTGGATACCTCTGAATTCCTTCTTCTTCTTTTGCTTTACGCTTTCCTCTCTTGAGGGTGCTTTAACATTATTTTCGGTTCCAGAAAGCTATAAAATTCGATCCCCTTTTTAGTTAAATGGGCTTTAACATTCCTTTTCCCAATTAGTCTACCCAGATATCAAAATCAAAACCCAACAAAGGAATTTCAAAATATGATCTCCCTGACGCTCATACTTGCAAAATCCCTTCTGATTTCAACGACTCTGTTCCCGAATTCTGTTGCTGTCTTAGTACAAGGGCAATTCTCGGTTCCGGCCATCCCAGTAGAAACCGAAACTCAAGTTTGCCGGCTGGACCTATCGGACGAGTTATTTGGGGGCGTGAGCCAAGCCTGCAATGGGAACCTAGACCGGAGCCGGTGCTGTCCGGTGCTCGCCGCATGGCTGTTCGCGGCTCACGCCAGGTCGGCATTGGAAGTGTCGGCTCCAGCGCCATCACCGGAAATAGATCTGCCATTGATGCCAGACGATTCCCAGAAATGTGTGGAATCACTTCAGAGCTCATTGGTGAAACGCAACATCAGACTTCCCCAGCCCAATTCTAGCTGCGACGCCGTATTGTGCTTCTGTGGAATTCGACTCCACCAGATAAGTTCCCTGTCTTGTCCGGCCGCATTCAATCTATCTGGCTTCCAGAATGCCACCCCAACTGCGGCGGTGCGTGACCTGGAGACGAATTGCCGCAACGCCTCTTACTCTGGTTGCACTAAATGCCTTGAGGCACTCCAAAAGGTACGACGAAACGAAACTAATCCATTTTTCCTCTCGTCATTAAAATGGGTAACTGAAAATTGGGTTGTTGATTTGTATTGGGAATTAGGTAAAGGGGGCTGGAGACAGGAGCACGACGGAAAGAGCAAGAAAAATGTTCAACAGAGACTGCCAATTGATGGGACTGACATGGTTGCTTGCTCGTAACAAAACGGCGTACATTCCGACCGTTTCGGCGGTTTTAAGGGCAATTATGTACAGTGCCCACCTACCTCACAATTCCAAATGCAGCCCAGATCAAGAAAACATGCCACTCGCCGTTGATTCCCTTCAATTTGATGACGCACATTCACAGTCACAATCCTCCTCCATTTTCATGTTTCCATTTTTGCGCTTATTGCTAACGCCTTTGGTTTGCCTGTTGTTCGTAATAGTTCGGCCGTAATACGGGCCGTGGTTTCTTGGACTGTTTTGGAGGGGAAGCCCACGTCGTGTCACGTGGAGTGAAGCTATTATTTCGGGGACTTCTACGCCCCTATTAGATTAATATCTTCGACATCTCATTTTTTACATAAAATGCTTTATTCTTAGACTTTCTTAGACTTTTTTTCATTGTTGTTATAAGCTATTTACCATTTAGGCTTTCTTTTTATATATAAAGTTTTTCTCTCTTCCATACACAAAATTTTTCTCTGTCGTTCATGTATATGCTTAGGGCTTCACCTCCATAGGTGTCTTTTTAGAAAAGAAAAAAAAAGGGTTAAATTCTTGCACTTTCTTTTTTTTTTACTCCTCCCTCTCTTTTCTCCTTTCTCCTCCCTTCCTTTTCTTTAGCCGCCATCTCCCTCCCTCAATCGTCAACGACACTATTGTCATCGTTCAACTTGTTGTTCGTAGTTTTCGTCATTCAACCCGTTGTCCGCTGCTCCCGTCGTTCAAGTTTCGGCCGTTCTGGCCATCCTTGTCTGCACCAGTGGCTGTCGGTCTCGAGAAGATTGCTAG CCTGACCACCTTTCAGACCATACCAAATTCTACTTCTTTTGGATACCTCTGAATTCCTTCTTCTTCTTTTGCTTTACGCTTTCCTCTCTTGAGGGTGCTTTAACATTATTTTCGGTTCCAGAAAGCTATAAAATTCGATCCCCTTTTTAGTTAAATGGGCTTTAACATTCCTTTTCCCAATTAGTCTACCCAGATATCAAAATCAAAACCCAACAAAGGAATTTCAAAATATGATCTCCCTGACGCTCATACTTGCAAAATCCCTTCTGATTTCAACGACTCTGTTCCCGAATTCTGTTGCTGTCTTAGTACAAGGGCAATTCTCGGTTCCGGCCATCCCAGTAGAAACCGAAACTCAAGTTTGCCGGCTGGACCTATCGGACGAGTTATTTGGGGGCGTGAGCCAAGCCTGCAATGGGAACCTAGACCGGAGCCGGTGCTGTCCGGTGCTCGCCGCATGGCTGTTCGCGGCTCACGCCAGGTCGGCATTGGAAGTGTCGGCTCCAGCGCCATCACCGGAAATAGATCTGCCATTGATGCCAGACGATTCCCAGAAATGTGTGGAATCACTTCAGAGCTCATTGGTGAAACGCAACATCAGACTTCCCCAGCCCAATTCTAGCTGCGACGCCGTATTGTGCTTCTGTGGAATTCGACTCCACCAGATAAGTTCCCTGTCTTGTCCGGCCGCATTCAATCTATCTGGCTTCCAGAATGCCACCCCAACTGCGGCGGTGCGTGACCTGGAGACGAATTGCCGCAACGCCTCTTACTCTGGTTGCACTAAATGCCTTGAGGCACTCCAAAAGGTAAAGGGGGCTGGAGACAGGAGCACGACGGAAAGAGCAAGAAAAATGTTCAACAGAGACTGCCAATTGATGGGACTGACATGGTTGCTTGCTCGTAACAAAACGGCGTACATTCCGACCGTTTCGGCGGTTTTAAGGGCAATTATGTACAGTGCCCACCTACCTCACAATTCCAAATGCAGCCCAGATCAAGAAAACATGCCACTCGCCGTTGATTCCCTTCAATTTGATGACGCACATTCACAGTCACAATCCTCCTCCATTTTCATGTTTCCATTTTTGCGCTTATTGCTAACGCCTTTGGTTTGCCTGTTGTTCGTAATATTTTCGTCATTCAACCCGTTGTCCGCTGCTCCCGTCGTTCAAGTTTCGGCCGTTCTGGCCATCCTTGTCTGCACCAGTGGCTGTCGGTCTCGAGAAGATTGCTAG ATGATCTCCCTGACGCTCATACTTGCAAAATCCCTTCTGATTTCAACGACTCTGTTCCCGAATTCTGTTGCTGTCTTAGTACAAGGGCAATTCTCGGTTCCGGCCATCCCAGTAGAAACCGAAACTCAAGTTTGCCGGCTGGACCTATCGGACGAGTTATTTGGGGGCGTGAGCCAAGCCTGCAATGGGAACCTAGACCGGAGCCGGTGCTGTCCGGTGCTCGCCGCATGGCTGTTCGCGGCTCACGCCAGGTCGGCATTGGAAGTGTCGGCTCCAGCGCCATCACCGGAAATAGATCTGCCATTGATGCCAGACGATTCCCAGAAATGTGTGGAATCACTTCAGAGCTCATTGGTGAAACGCAACATCAGACTTCCCCAGCCCAATTCTAGCTGCGACGCCGTATTGTGCTTCTGTGGAATTCGACTCCACCAGATAAGTTCCCTGTCTTGTCCGGCCGCATTCAATCTATCTGGCTTCCAGAATGCCACCCCAACTGCGGCGGTGCGTGACCTGGAGACGAATTGCCGCAACGCCTCTTACTCTGGTTGCACTAAATGCCTTGAGGCACTCCAAAAGGTAAAGGGGGCTGGAGACAGGAGCACGACGGAAAGAGCAAGAAAAATGTTCAACAGAGACTGCCAATTGATGGGACTGACATGGTTGCTTGCTCGTAACAAAACGGCGTACATTCCGACCGTTTCGGCGGTTTTAAGGGCAATTATGTACAGTGCCCACCTACCTCACAATTCCAAATGCAGCCCAGATCAAGAAAACATGCCACTCGCCGTTGATTCCCTTCAATTTGATGACGCACATTCACAGTCACAATCCTCCTCCATTTTCATGTTTCCATTTTTGCGCTTATTGCTAACGCCTTTGGTTTGCCTGTTGTTCGTAATATTTTCGTCATTCAACCCGTTGTCCGCTGCTCCCGTCGTTCAAGTTTCGGCCGTTCTGGCCATCCTTGTCTGCACCAGTGGCTGTCGGTCTCGAGAAGATTGCTAG MISLTLILAKSLLISTTLFPNSVAVLVQGQFSVPAIPVETETQVCRLDLSDELFGGVSQACNGNLDRSRCCPVLAAWLFAAHARSALEVSAPAPSPEIDLPLMPDDSQKCVESLQSSLVKRNIRLPQPNSSCDAVLCFCGIRLHQISSLSCPAAFNLSGFQNATPTAAVRDLETNCRNASYSGCTKCLEALQKVKGAGDRSTTERARKMFNRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSAHLPHNSKCSPDQENMPLAVDSLQFDDAHSQSQSSSIFMFPFLRLLLTPLVCLLFVIFSSFNPLSAAPVVQVSAVLAILVCTSGCRSREDC Homology
BLAST of CcUC02G028330 vs. NCBI nr
Match: XP_038901814.1 (uncharacterized GPI-anchored protein At4g28100-like [Benincasa hispida]) HSP 1 Score: 534.3 bits (1375), Expect = 7.7e-148 Identity = 275/302 (91.06%), Postives = 283/302 (93.71%), Query Frame = 0
BLAST of CcUC02G028330 vs. NCBI nr
Match: XP_004139964.1 (uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus] >KGN46678.1 hypothetical protein Csa_020848 [Cucumis sativus]) HSP 1 Score: 522.3 bits (1344), Expect = 3.0e-144 Identity = 266/299 (88.96%), Postives = 278/299 (92.98%), Query Frame = 0
BLAST of CcUC02G028330 vs. NCBI nr
Match: XP_008448226.1 (PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Cucumis melo] >TYJ96632.1 putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 521.9 bits (1343), Expect = 4.0e-144 Identity = 265/298 (88.93%), Postives = 276/298 (92.62%), Query Frame = 0
BLAST of CcUC02G028330 vs. NCBI nr
Match: KAG7034939.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 485.3 bits (1248), Expect = 4.1e-133 Identity = 247/295 (83.73%), Postives = 265/295 (89.83%), Query Frame = 0
BLAST of CcUC02G028330 vs. NCBI nr
Match: XP_022947263.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata]) HSP 1 Score: 485.0 bits (1247), Expect = 5.4e-133 Identity = 248/298 (83.22%), Postives = 266/298 (89.26%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy Swiss-Prot
Match: Q9SUC9 (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 5.8e-106 Identity = 209/304 (68.75%), Postives = 246/304 (80.92%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy TrEMBL
Match: A0A0A0KAY3 (SPARK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G121950 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.5e-144 Identity = 266/299 (88.96%), Postives = 278/299 (92.98%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy TrEMBL
Match: A0A5D3B9U0 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold464G00450 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.9e-144 Identity = 265/298 (88.93%), Postives = 276/298 (92.62%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy TrEMBL
Match: A0A1S3BJT3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucumis melo OX=3656 GN=LOC103490480 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.9e-144 Identity = 265/298 (88.93%), Postives = 276/298 (92.62%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy TrEMBL
Match: A0A6J1G647 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=3662 GN=LOC111451182 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.6e-133 Identity = 248/298 (83.22%), Postives = 266/298 (89.26%), Query Frame = 0
BLAST of CcUC02G028330 vs. ExPASy TrEMBL
Match: A0A6J1HZY7 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 GN=LOC111469629 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 2.2e-132 Identity = 249/302 (82.45%), Postives = 268/302 (88.74%), Query Frame = 0
BLAST of CcUC02G028330 vs. TAIR 10
Match: AT4G28100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 385.6 bits (989), Expect = 4.1e-107 Identity = 209/304 (68.75%), Postives = 246/304 (80.92%), Query Frame = 0
BLAST of CcUC02G028330 vs. TAIR 10
Match: AT3G18050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 196.4 bits (498), Expect = 3.6e-50 Identity = 127/328 (38.72%), Postives = 183/328 (55.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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