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CcUC02G028260 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTTTTTCATCTAGCTGAAATTTCAAGAAACGTCAACATCATCTCTCTGCTTCACACCTCATCAGCAGAGTTTTGCGCACCGAACATGCATCTGAATTCTGAAAGTAGGCGTATCCAACAGCAATGGATCAACTAATTCAACGCAACGATCTTGTTCAAAATCCGGCCACACCCTCCACCTCCTTTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAGGTTTGTACAAGTATCCGCCATTTCAATCTGGTTTTGTTTTCCGGTGTTGTTAATTCTTTGTTTAAGAACGATTTTGTTTCTCTGTGAAACTATGGCAATGGCTTTTATTCGGAAAATTTGGACTTTAGAGGAAAAGTTTCGCAATCTGCAACCATAAATGTTGAAACCTATTGGCTGAATTTGGTACTCTTTGTAATGTCAAGGAAATTTTGAAACCTAAGGACCAAATTGATTTAGGTTAAATATGCAACGAAAGAACCATAGTTTCCATGATTCCTAGAGTTGTTTAACTATCTTTACTATTGTGTTAAGAACATAAATTACCTTTAGCTTACTGGCTTCGTATGAATTATATGTTTTCCGCTGCCAAAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAATGAACAATTTGTCGCGCTGGGAAATATTTTAGGTGAAATTAAAAGAATTTCGTCTGTTCACACATTGCTGTTTTTCTATTTCTACCGTCATTTATACCTTATGTTTTGATTTTCTTATGCCTTGTTTCTACTTTTTTATGCTTTTCTGAGTTCAACATGTACATATTCTAGGGAGACCTACAAATTTTCGAGTGGATTTCATTGTATTGTGTTACATGCTATTAGTGTACTTGCTTCCAAATGATGTTTAAGTTTCATTTTCTAGTTTGTCAGCTTCGAATTTCTTAACTAGAATGTGTTGCAATCAGATTTATTAGAATTCCAAGCTCTGGTTCATTTTACCCATGCTAGGAGCGAAGTGTGAATTTGAACCATTTTACATACGGATTATTGGGTGAGGAGGTGATGCATAGATCAATAGAAAACCTGTGTAAAGGACGGACATAGGGTAGCAAGTATGTTGTTAACTGACTGGGTCCCCTATTGTCTGACCATAGTTTGGAATGTATCAGAATGAGGTATGAGAGTGCAAAGTAGTGAGCTTAGTCAATAAGGGAGAGTATAAAACCTGTCTTGTTTTCTGAAAGCTTGTAATTTTCCTTCTTCAAGCAACACATATTGGCATATTTCAGCTAAGAGCTCCTTCACAGATCATTTGTATGTATTGCGAAAATATGAACTTGTGTTTCTGTATTTTTGTTACTTATTCTTAGCAATCAATAATACAACTGTACAACCTATAGCACATATCTAGTTCAAGTAAGATTATTTTTTTGAAAAAAATTATTCTCTAGGTCACTGTCTGTGCAATCATTCGCCTCTGGATTAGGAACATGGGATTACTTACGTTGATATTATCTTTAACTCTGCAGATCCCGATAGGCCCAAAAATGACAAAGCAACCATTTCAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTACTTTGATAGAAGAATCACACGAGGTGATGTTTTGTATGTCCTGGTATATAAATAAATTAGACAATTTTGAATATGCTACTTTAATAGAAGAATTAGACTGAGGTGATATTTTGTATGTGCTAGTATATAAATAAATTAGACAATTATCTTATACCAAGCAATTAATATTAGTTCATCACATGACTTTCTTCAACTGCAGCTAGCCCAGGAAAAGAGTGATCTGAAAGAAGAGAAGGCGTTGCTTACATATGATATTGAGAATCTTAATGCTCAGTATCAGCATAAACTCAGGGCTACATACCCTGGGCTATCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAATGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATTCTTGCAACCTTATATGTTCTTTGGAAATTTGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCTCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATTGGTCTGATAACTTCAGTGAGTAAAATTCCAGGAGCAAGTTCTTAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACATGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGTTAGTTTATAGTACTAACCTCCTGAAGCTGGTCTGTAGTTAATATACTTATATCCATACCATCATCTAAGCTTGTTCATTTGCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCTTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAAAAGGTGCAGATTCACCTAAATTGGTCCCTGAATTTTATTTTCGATGGTCTATAACTTTCTCAAGAACTTCTTAGTGCTTATCTAGTTGTCTGCAACTGAGGTGGATCATCTTCAATGGAACGTAAAGGGTCGTCACAAAATTAATGGTATTTTGAGATTGTGAACTAGTATTTTTACCTTACCTCCTTTGTGAAGCCTTTAAAGTTGCGGCAACTATTTAATCCATCTCCATCTTATCTACCTGGACATGGTTGTGCAAGTGCAATGCAAGCAATAAGGTTTTGGGCCTAGGGTTGTTTTGCTGCAAAAATCCCACACTGAGAAATTAGCTAAAGCATTCTACAGATGGTTGGTCCATTCCTTTAAAAACTTTTCGTTTCCTTATGCTAAATCTCCAGGTTATGTCATTGTTGATGTCTGACAGACAATGTGACAAGATATTTTCGTTTAAAAAATCATGTGGAAATGACTCTGAGAGCATGTAGATGTGAAGTATACATACACGATATTTTGAGAAATTATGTTGAAATTTTGAATCAAGAGACGCTACTTGTCGATCTCATGCCTGATCGAAATGGGAGCAATCGCATCATCATTGGCAGTAAGACCAAGAAGGCGAAATGATTATGAGGAACGAACGCAAGGTCTTGAATGCTGAAAGAGATGGTGGGGGAGAGGCCATTAATGCTGATATTATCCAGAAAAAGGTCTTGAATGAAAGGTGGAAAAGCATCCATATTATGAGTGCCCCAAAAACAGATTGCTTTCCCTGCTGCTTGGGAAAATCTAGATATGTTTAAACTTGTTCACATGACATTGGTGAAGTAGAAAAGTGCAAGAGAGTTGAGCCCTCTGCTTGATGGTCTTCAAATCTTCAACTTCTAGAGGAGGTTATGCCAATTACGATTGAAACAAATTTACTTTGACTTCTTGGTCTAATCCACTTGGAGCTGGGTTTTACTATAATCCACTTATTTATATATTTGTTTCTTTATTTTTTGTGTTCAAG TTATTTTTTCATCTAGCTGAAATTTCAAGAAACGTCAACATCATCTCTCTGCTTCACACCTCATCAGCAGAGTTTTGCGCACCGAACATGCATCTGAATTCTGAAAGTAGGCGTATCCAACAGCAATGGATCAACTAATTCAACGCAACGATCTTGTTCAAAATCCGGCCACACCCTCCACCTCCTTTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAATGAACAATTTGTCGCGCTGGGAAATATTTTAGATCCCGATAGGCCCAAAAATGACAAAGCAACCATTTCAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTACTTTGATAGAAGAATCACACGAGGGCTACATACCCTGGGCTATCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAATGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATTCTTGCAACCTTATATGTTCTTTGGAAATTTGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCTCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATTGGTCTGATAACTTCAGTGAGAGCAAGTTCTTAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACATGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCTTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAAAAGGTGCAGATTCACCTAAATTGGTCCCTGAATTTTATTTTCGATGGTCTATAACTTTCTCAAGAACTTCTTAGTGCTTATCTAGTTGTCTGCAACTGAGGTGGATCATCTTCAATGGAACGTAAAGGGTCGTCACAAAATTAATGGTATTTTGAGATTGTGAACTAGTATTTTTACCTTACCTCCTTTGTGAAGCCTTTAAAGTTGCGGCAACTATTTAATCCATCTCCATCTTATCTACCTGGACATGGTTGTGCAAGTGCAATGCAAGCAATAAGGTTTTGGGCCTAGGGTTGTTTTGCTGCAAAAATCCCACACTGAGAAATTAGCTAAAGCATTCTACAGATGGTTGGTCCATTCCTTTAAAAACTTTTCGTTTCCTTATGCTAAATCTCCAGGTTATGTCATTGTTGATGTCTGACAGACAATGTGACAAGATATTTTCGTTTAAAAAATCATGTGGAAATGACTCTGAGAGCATGTAGATGTGAAGTATACATACACGATATTTTGAGAAATTATGTTGAAATTTTGAATCAAGAGACGCTACTTGTCGATCTCATGCCTGATCGAAATGGGAGCAATCGCATCATCATTGGCAGTAAGACCAAGAAGGCGAAATGATTATGAGGAACGAACGCAAGGTCTTGAATGCTGAAAGAGATGGTGGGGGAGAGGCCATTAATGCTGATATTATCCAGAAAAAGGTCTTGAATGAAAGGTGGAAAAGCATCCATATTATGAGTGCCCCAAAAACAGATTGCTTTCCCTGCTGCTTGGGAAAATCTAGATATGTTTAAACTTGTTCACATGACATTGGTGAAGTAGAAAAGTGCAAGAGAGTTGAGCCCTCTGCTTGATGGTCTTCAAATCTTCAACTTCTAGAGGAGGTTATGCCAATTACGATTGAAACAAATTTACTTTGACTTCTTGGTCTAATCCACTTGGAGCTGGGTTTTACTATAATCCACTTATTTATATATTTGTTTCTTTATTTTTTGTGTTCAAG ATGGATCAACTAATTCAACGCAACGATCTTGTTCAAAATCCGGCCACACCCTCCACCTCCTTTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAATGAACAATTTGTCGCGCTGGGAAATATTTTAGATCCCGATAGGCCCAAAAATGACAAAGCAACCATTTCAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTACTTTGATAGAAGAATCACACGAGGGCTACATACCCTGGGCTATCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAATGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATTCTTGCAACCTTATATGTTCTTTGGAAATTTGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCTCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATTGGTCTGATAACTTCAGTGAGAGCAAGTTCTTAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACATGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCTTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAA MDQLIQRNDLVQNPATPSTSFVPCIELPGHPIRSQSNSRFDGEFKDSAAARKVQKADREKLRRGRLNEQFVALGNILDPDRPKNDKATISMDTIQLLKDLTSQVNKLKTEHATLIEESHEGYIPWAIMDHSVVMAPAPFPFPMPMQMPPGPFPLHPFLQPYMFFGNLDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQSGNWSDNFSESKFLVESKIEKSVDSNEVATYMELKTPGSSSDQDSSFECSNGKNRKENNLSEESSSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP Homology
BLAST of CcUC02G028260 vs. NCBI nr
Match: XP_008457648.1 (PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo]) HSP 1 Score: 449.1 bits (1154), Expect = 2.9e-122 Identity = 250/333 (75.08%), Postives = 268/333 (80.48%), Query Frame = 0
BLAST of CcUC02G028260 vs. NCBI nr
Match: XP_004147018.1 (transcription factor bHLH121 [Cucumis sativus] >KGN61896.1 hypothetical protein Csa_006650 [Cucumis sativus]) HSP 1 Score: 441.0 bits (1133), Expect = 7.9e-120 Identity = 248/335 (74.03%), Postives = 266/335 (79.40%), Query Frame = 0
BLAST of CcUC02G028260 vs. NCBI nr
Match: XP_038902535.1 (transcription factor bHLH121 [Benincasa hispida]) HSP 1 Score: 434.5 bits (1116), Expect = 7.4e-118 Identity = 240/321 (74.77%), Postives = 256/321 (79.75%), Query Frame = 0
BLAST of CcUC02G028260 vs. NCBI nr
Match: XP_022146203.1 (transcription factor bHLH121-like isoform X1 [Momordica charantia]) HSP 1 Score: 354.0 bits (907), Expect = 1.3e-93 Identity = 213/328 (64.94%), Postives = 236/328 (71.95%), Query Frame = 0
BLAST of CcUC02G028260 vs. NCBI nr
Match: XP_008457649.1 (PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 1.3e-82 Identity = 187/265 (70.57%), Postives = 199/265 (75.09%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.9e-53 Identity = 145/308 (47.08%), Postives = 185/308 (60.06%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy Swiss-Prot
Match: Q8W2F2 (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11 Identity = 81/247 (32.79%), Postives = 126/247 (51.01%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy Swiss-Prot
Match: Q10KL8 (Protein IRON-RELATED TRANSCRIPTION FACTOR 3 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO3 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11 Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy Swiss-Prot
Match: Q69V10 (Transcription factor BHLH062 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH062 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11 Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy Swiss-Prot
Match: Q9SN74 (Transcription factor bHLH47 OS=Arabidopsis thaliana OX=3702 GN=BHLH47 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.2e-07 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy TrEMBL
Match: A0A1S3C6M9 (transcription factor bHLH121 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.4e-122 Identity = 250/333 (75.08%), Postives = 268/333 (80.48%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy TrEMBL
Match: A0A0A0LPK4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G263910 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.8e-120 Identity = 248/335 (74.03%), Postives = 266/335 (79.40%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy TrEMBL
Match: A0A6J1CXY9 (transcription factor bHLH121-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015477 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 6.2e-94 Identity = 213/328 (64.94%), Postives = 236/328 (71.95%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy TrEMBL
Match: A0A1S3C798 (transcription factor bHLH121 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 6.4e-83 Identity = 187/265 (70.57%), Postives = 199/265 (75.09%), Query Frame = 0
BLAST of CcUC02G028260 vs. ExPASy TrEMBL
Match: A0A6J1CXG2 (transcription factor bHLH121-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015477 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 2.1e-81 Identity = 180/283 (63.60%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of CcUC02G028260 vs. TAIR 10
Match: AT3G19860.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 209.9 bits (533), Expect = 2.8e-54 Identity = 145/308 (47.08%), Postives = 185/308 (60.06%), Query Frame = 0
BLAST of CcUC02G028260 vs. TAIR 10
Match: AT3G19860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 208.8 bits (530), Expect = 6.2e-54 Identity = 138/282 (48.94%), Postives = 176/282 (62.41%), Query Frame = 0
BLAST of CcUC02G028260 vs. TAIR 10
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 9.0e-13 Identity = 81/247 (32.79%), Postives = 126/247 (51.01%), Query Frame = 0
BLAST of CcUC02G028260 vs. TAIR 10
Match: AT4G36060.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 9.0e-13 Identity = 81/247 (32.79%), Postives = 126/247 (51.01%), Query Frame = 0
BLAST of CcUC02G028260 vs. TAIR 10
Match: AT3G47640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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