CcUC02G028240 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCGGTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGTTGATGGACAAGGAGAAAGGAGTGATCACGTTGGAAAGCCTTAGGAGAAATTCTTGGCTGTTGGGTGTGCGAGACATGGGAAATGAGGAGCTTATCAGCATGATGAGGGAAGGCGATTTAGACGGCGATGGTGCTTTGAATCAGATGGAATTTTGCGTTTTGATGTTTAGATTAAGCCCAGATTTGATGGAACACTCTTTGTATTGGCTTCAACATGCTTTTGAAACGGAGTTTAATTAA ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCGGTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGTTGATGGACAAGGAGAAAGGAGTGATCACGTTGGAAAGCCTTAGGAGAAATTCTTGGCTGTTGGGTGTGCGAGACATGGGAAATGAGGAGCTTATCAGCATGATGAGGGAAGGCGATTTAGACGGCGATGGTGCTTTGAATCAGATGGAATTTTGCGTTTTGATGTTTAGATTAAGCCCAGATTTGATGGAACACTCTTTGTATTGGCTTCAACATGCTTTTGAAACGGAGTTTAATTAA ATGGCGAGAAAGGTTGGTGCTAATTTCCAGGACCTGCTTCCGGTAATGGCAGAGAAATTGGGAGGAGATGGGCTGATAAAGGAGCTGTGTAATGGGTTTGAAGTGTTGATGGACAAGGAGAAAGGAGTGATCACGTTGGAAAGCCTTAGGAGAAATTCTTGGCTGTTGGGTGTGCGAGACATGGGAAATGAGGAGCTTATCAGCATGATGAGGGAAGGCGATTTAGACGGCGATGGTGCTTTGAATCAGATGGAATTTTGCGTTTTGATGTTTAGATTAAGCCCAGATTTGATGGAACACTCTTTGTATTGGCTTCAACATGCTTTTGAAACGGAGTTTAATTAA MARKVGANFQDLLPVMAEKLGGDGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRDMGNEELISMMREGDLDGDGALNQMEFCVLMFRLSPDLMEHSLYWLQHAFETEFN Homology
BLAST of CcUC02G028240 vs. NCBI nr
Match: XP_038902367.1 (calcium-binding protein KRP1-like [Benincasa hispida]) HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51 Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of CcUC02G028240 vs. NCBI nr
Match: XP_004140055.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN46674.1 hypothetical protein Csa_020739 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 3.9e-51 Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CcUC02G028240 vs. NCBI nr
Match: KAG6570861.1 (Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43 Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of CcUC02G028240 vs. NCBI nr
Match: XP_022944617.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of CcUC02G028240 vs. NCBI nr
Match: XP_022986403.1 (calcium-binding protein PBP1-like [Cucurbita maxima]) HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 5.5e-32 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 7.5e-29 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08 Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy TrEMBL
Match: A0A0A0KCV2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51 Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy TrEMBL
Match: A0A6J1JGE3 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy TrEMBL
Match: A0A6J1FW37 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy TrEMBL
Match: A0A6J1G6H5 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451279 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41 Identity = 89/112 (79.46%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of CcUC02G028240 vs. ExPASy TrEMBL
Match: A0A6J1HZZ8 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.0e-41 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of CcUC02G028240 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CcUC02G028240 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 ) HSP 1 Score: 133.7 bits (335), Expect = 9.7e-32 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of CcUC02G028240 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 127.9 bits (320), Expect = 5.3e-30 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of CcUC02G028240 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 49.3 bits (116), Expect = 2.4e-06 Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of CcUC02G028240 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 ) HSP 1 Score: 49.3 bits (116), Expect = 2.4e-06 Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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