CcUC02G027850 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G027850
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
LocationCicolChr02: 20023495 .. 20025987 (+)
RNA-Seq ExpressionCcUC02G027850
SyntenyCcUC02G027850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTATCAATCGAAAGCACCCAAAGTTGAGATTTTGCCATTAAAAGCAAAAGGAAATAGGAGTCGGGTAGCAAATTATTGGATTATCAAGTTTATAGGTAAAAGAGATAACGTCACAAATTGCAGAGTTACTAATTCTCTGCTAGTGGCAGTTTGTAACTTGTAAAGTTGGTAACTTTAATTGACGACGGCTGAACAACCAATCCATAGAAATCCCACAAAAAGAAAAAAGGCAACCCCAAGAGATGGAAAAGATTTGAATAGCGATGAAAAAAGGGGTAAGCTTAACTCAAATGGTTCAGCTCATGATATAAAGTAACCATGGTTTTGGGGTTTTGGCTATGGCAGAGTGTGGTAGAAGAGACAGAAAGGTAACCAGGGTTAGAGAACGTGGGTTAGTCTCCTTCAGAACCGGAGAGGTAGGTTTGGGGTTTGTCGAGCTCCAGAACTTTACAGGAAGAAGGAGGCTGCCTGTGTCTCTCTGTATAAAACCATCAACAAAGACCCTCTTGTTTGTCATTAACAAAACATACAAAAAAAGGGGAATGAACTTCTCACCGATTCTGTGAATCTCGATCGTCTCTTTGCTTCATCCTGTTGATATTCTCTCTTCTTCTCATCCTTTGAAGCCAACCCTCTCTGATTCTGGTATGCTTTTCATCTTGCTTCGCCACAATTTGGTCTGGTTTCTAGATTGGGATTATGATCTTGGTTTCATTAGCTGATTTGGGTTCTCCAGGTTTTTGGGTTTGTCGCTGGATTTTCTTTCTAAATTTGCAAGGATGGAGTTCTGGGGTCCTTTGGAATTCTTTTACGCGGTTTTGAATTTGATCCGAGAAGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGTTGTCGAACTGGATTGTGGATTGATTTCCCTTTGTATCATTCGTGTTCTTGTTCTGTGGTATTTTGATCAATCTCTCAAACTTTCTGGATCGTTTCTGGGTAAATTTATTGTTCTTGATCTTGATGTTCAACAATGGACACTCTTGGTATTCTGTTTAGTGTGTGTACTGATTGTTGGGTTTCTCCCTGTTTCTTTTTTCTATATATTTTTCTTGTTCTGAAATGAAATTGTCAGTAGAAGGTTGTTTTTAATGATTCTATTCCATGTTATTGGCTCTAGCGTCTAAAACAGATCTCTACTCAATGAGGTTTCTATTTCCAGTTGGAACTTTTCTGTCTTCATTTGCTATTGGGAGCTAGGATCATAAAAGAAAGGAGTACATTCATTCATTAACGTATTGAGGCTTAATTCTTTGTCCAGAGTTTGAATTCTTTGGTTGTCTGTAGGTTCTGCTCTTTTTATTTTCTTCTGTCAAACAAATCTTTTCCTCCACTCTTCATCTTTCAACAGATTTGGCTCTTTTCTTAATACAGTATTTGATAAGTCGCTTTATTCTTCTTCTCTGTTTCCTGCCTGGAACTCTAATTCCCCCCTACTCCACCCTTTTTCATTTTCAGATCAGGTATCAAGAAAACGATCAAACTGCAGAACCGTTTGAACTCAGAAGCCAGAACTGTGACTACTTTCACATTCTACTGATCTGTTTTGATTCATCTTAGCTGATCCCAGTTCTTCATATTTCCAAAGACTTGTTTTGTACCTGAAATTTTGATCAGAATGGGTCTCTCCAGCCTTCCTGCCCCTTCCGAAGGAGTACTGGGTGTCATCCTTGTAAATACAGCCTTATCAATTTCTATCTTCAAAGGGATAGTTCGGTCAATTCTCCACGTTGTTGGCATCCATCTCTTGTCGTCGCCTACATTACCATCTTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCATCTTAACCCAAATGGAAGTTACATTGAAGAGTTCCACAGCCGAATTCCAGCAATTCTGTTCGACAAAGTTCATAGCTGCAAATGGCTCGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTCTTCCACAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCACTTTGTCGAACTCCACTAGTGCCCGAAGAAGACACAGCTTCCTGCTTTTGGTGAGCATTATGAATATTATGGTTGAGGAATCTCATTCCATGTACAGCACCATAGTGTAGATAATCTTAAAAGTGCATCCGCAGGCCGTAGCATTTGTATCCTTCATATGCATGAGGAGTTGAAGCGTGATGAGCGTGGATGGGTCTCAGACCCCAGTTATTTCATTGTAAATATGAAGCTTTCTGGTTTTTTCTTTTTTGCTGTTGTGTTTATGCAGTCTTGAGACTGGCTTTTACATTTCGAGT

mRNA sequence

AATTATCAATCGAAAGCACCCAAAGTTGAGATTTTGCCATTAAAAGCAAAAGGAAATAGGAGTCGGGTAGCAAATTATTGGATTATCAAGTTTATAGAGTGTGGTAGAAGAGACAGAAAGGTAACCAGGGTTAGAGAACGTGGGTTAGTCTCCTTCAGAACCGGAGAGGTAGGTTTGGGGTTTGTCGAGCTCCAGAACTTTACAGGAAGAAGGAGGCTGCCTGTGTCTCTCTGTATAAAACCATCAACAAAGACCCTCTTATCAGGTATCAAGAAAACGATCAAACTGCAGAACCGTTTGAACTCAGAAGCCAGAACTTTCTTCATATTTCCAAAGACTTGTTTTGTACCTGAAATTTTGATCAGAATGGGTCTCTCCAGCCTTCCTGCCCCTTCCGAAGGAGTACTGGGTGTCATCCTTGTAAATACAGCCTTATCAATTTCTATCTTCAAAGGGATAGTTCGGTCAATTCTCCACGTTGTTGGCATCCATCTCTTGTCGTCGCCTACATTACCATCTTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCATCTTAACCCAAATGGAAGTTACATTGAAGAGTTCCACAGCCGAATTCCAGCAATTCTGTTCGACAAAGTTCATAGCTGCAAATGGCTCGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTCTTCCACAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCACTTTGTCGAACTCCACTAGTGCCCGAAGAAGACACAGCTTCCTGCTTTTGTCTTGAGACTGGCTTTTACATTTCGAGT

Coding sequence (CDS)

AATTATCAATCGAAAGCACCCAAAGTTGAGATTTTGCCATTAAAAGCAAAAGGAAATAGGAGTCGGGTAGCAAATTATTGGATTATCAAGTTTATAGAGTGTGGTAGAAGAGACAGAAAGGTAACCAGGGTTAGAGAACGTGGGTTAGTCTCCTTCAGAACCGGAGAGGTAGGTTTGGGGTTTGTCGAGCTCCAGAACTTTACAGGAAGAAGGAGGCTGCCTGTGTCTCTCTGTATAAAACCATCAACAAAGACCCTCTTATCAGGTATCAAGAAAACGATCAAACTGCAGAACCGTTTGAACTCAGAAGCCAGAACTTTCTTCATATTTCCAAAGACTTGTTTTGTACCTGAAATTTTGATCAGAATGGGTCTCTCCAGCCTTCCTGCCCCTTCCGAAGGAGTACTGGGTGTCATCCTTGTAAATACAGCCTTATCAATTTCTATCTTCAAAGGGATAGTTCGGTCAATTCTCCACGTTGTTGGCATCCATCTCTTGTCGTCGCCTACATTACCATCTTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCATCTTAACCCAAATGGAAGTTACATTGAAGAGTTCCACAGCCGAATTCCAGCAATTCTGTTCGACAAAGTTCATAGCTGCAAATGGCTCGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTCTTCCACAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCACTTTGTCGAACTCCACTAGTGCCCGAAGAAGACACAGCTTCCTGCTTTTGTCTTGAGACTGGCTTTTACATTTCGAGT

Protein sequence

NYQSKAPKVEILPLKAKGNRSRVANYWIIKFIECGRRDRKVTRVRERGLVSFRTGEVGLGFVELQNFTGRRRLPVSLCIKPSTKTLLSGIKKTIKLQNRLNSEARTFFIFPKTCFVPEILIRMGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCFCLETGFYISS
Homology
[Close]
BLAST of CcUC02G027850 vs. NCBI nr
Match: KAG7010803.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-95
Identity = 191/253 (75.49%), Postives = 205/253 (81.03%), Query Frame = 0 

Query: 33  ECGRRDRKVTRVRERGLVSFRTGEVGLGFVELQNFTGRRRLPVSLCIKPSTKTLLSGIKK 92
           ECGRRDRK+TRVRERGLV FR GE  +GF+ +        L V   + P+ K  LS I K
Sbjct: 3   ECGRRDRKLTRVRERGLVFFRAGE-NVGFLSVS-------LAVLSSLSPAMK--LSDINK 62

Query: 93  TIKLQNRLNSEARTFFI------FPKTCFVPEILIR---MGLSSLPAPSEGVLGVILVNT 152
            I LQNRLNSE R+ F+      F  +  +P + I    MGLSSLPAPSEGVLGVILVNT
Sbjct: 63  RINLQNRLNSELRSDFLYILLIFFDSSELIPVLHISNNLMGLSSLPAPSEGVLGVILVNT 122

Query: 153 ALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFHSRI 212
           ALSISIFKGIVRSILHVVGIH LSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEF SRI
Sbjct: 123 ALSISIFKGIVRSILHVVGIH-LSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFRSRI 182

Query: 213 PAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCR 272
           PAILF+KVHSCK LEHDCSVCLTQF P+SEINHLSCGHLFHRVCLEKWLDYWNLTCPLCR
Sbjct: 183 PAILFNKVHSCKLLEHDCSVCLTQFAPDSEINHLSCGHLFHRVCLEKWLDYWNLTCPLCR 242

Query: 273 TPLVPEEDTASCF 277
           TP +PEEDTASCF
Sbjct: 243 TPFMPEEDTASCF 244

[Close]
BLAST of CcUC02G027850 vs. NCBI nr
Match: XP_004139989.1 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742532.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742533.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >KGN46618.1 hypothetical protein Csa_005123 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 3.7e-82
Identity = 150/154 (97.40%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL SSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTPL+PEEDTASCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCF 154

[Close]
BLAST of CcUC02G027850 vs. NCBI nr
Match: XP_038900972.1 (probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida] >XP_038900973.1 probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-80
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHV+G HL SSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVIGFHLSSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTPL+ EEDT SCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMSEEDTGSCF 154

[Close]
BLAST of CcUC02G027850 vs. NCBI nr
Match: XP_008448128.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo] >KAA0060845.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK27107.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-79
Identity = 148/155 (95.48%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL-LSSPTLPSSPDSMENA 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL  SS TLPSSPDSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 183 PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGH 242
           PESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 243 LFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           LFH VCLEKWLDYWNLTCPLCRTPL+PEEDTASCF
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCF 155

[Close]
BLAST of CcUC02G027850 vs. NCBI nr
Match: KAG6570965.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.5 bits (776), Expect = 1.9e-78
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH LSSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH-LSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNGSYIEEF SRIPAILF+KVHSCK LEHDCSVCLTQF P+SEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFNKVHSCKLLEHDCSVCLTQFAPDSEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTP +PEEDTASCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPFMPEEDTASCF 153

[Close]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-43
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPD-SMENA 182
           MGLSSLP PSEG+L VILVNTALSISI KGIVRS L +VGI L  S + PSS   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 183 --PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSC-KWLEHDCSVCLTQFEPESEINHLS 242
              ES +F +    SY+EEF +R P + F+ +  C K  +++CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 243 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--VPEEDTAS 275
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  VPE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.2e-13
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 0 

Query: 132 SEGVLGVILVNTALSISIFKGIVRSILHVVGI--HLLSSPTLPSSPDSMENAPESIEFHL 191
           +E  L  + V T   +   + IV SI   +G+   L    T P         PE+     
Sbjct: 8   TEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIPET----R 67

Query: 192 NPNGSYIEEFHSRIPAILFDKV-HSCKWLEHDCSVCLTQFEPESEINHL-SCGHLFHRVC 251
           +P  + +      +P I F+++ +S + L  +C+VCL +FE E EI  L +C H+FHR C
Sbjct: 68  SPFSALL--IREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSC 127

Query: 252 LEKWLDYWNLTCPLCRTPLVPEE 271
           L++W+D+   TCPLCRTP VP+E
Sbjct: 128 LDRWMDHDQKTCPLCRTPFVPDE 144

[Close]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 220 DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVP 269
           DC VCL++ +   E+  L C H+FH+ CLE WL + N  CPLCR+PL+P
Sbjct: 73  DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121

[Close]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 220 DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVPEE--------- 279
           DC VCL++ +   E+  L C H+FH+ CLE WL  +N TCPLCR+ LV ++         
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDDCVSKTQRSV 144

[Close]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 212 HSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCR 264
           H+    + +C +CL+ +E E+E+  L CGH FH  C++KWL Y N TCPLC+
Sbjct: 316 HALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWL-YINATCPLCK 366

[Close]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match: A0A0A0KAU4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G113550 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.8e-82
Identity = 150/154 (97.40%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL SSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTPL+PEEDTASCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCF 154

[Close]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match: A0A5D3DTM0 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2527G00040 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-79
Identity = 148/155 (95.48%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL-LSSPTLPSSPDSMENA 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL  SS TLPSSPDSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 183 PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGH 242
           PESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 243 LFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           LFH VCLEKWLDYWNLTCPLCRTPL+PEEDTASCF
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCF 155

[Close]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match: A0A1S3BIY9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103490418 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-79
Identity = 148/155 (95.48%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL-LSSPTLPSSPDSMENA 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHL  SS TLPSSPDSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 183 PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGH 242
           PESIEFHLNPNGSYIEEF SRIPAILFDKV SCKWLEHDCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 243 LFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           LFH VCLEKWLDYWNLTCPLCRTPL+PEEDTASCF
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCF 155

[Close]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match: A0A6J1FXQ9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111448681 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 9.2e-79
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH LSSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH-LSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNGSYIEEF SRIPAILF+KVHSCK LEHDCSVCLTQF P+SEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFNKVHSCKLLEHDCSVCLTQFAPDSEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTP +PEEDTASCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPFMPEEDTASCF 153

[Close]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match: A0A6J1JEA7 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111483745 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.0e-78
Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH LSSPTLPSSPDSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIH-LSSPTLPSSPDSMENAP 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHL 242
           ESIEFHLNPNG+YIEEF SRIPAILF+KVHSCK LEHDCSVCLTQF P+SEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGNYIEEFRSRIPAILFNKVHSCKLLEHDCSVCLTQFAPDSEINHLSCGHL 120

Query: 243 FHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCF 277
           FHRVCLEKWLDYWNLTCPLCRTP +PEEDTASCF
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPFMPEEDTASCF 153

[Close]
BLAST of CcUC02G027850 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 8.6e-45
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPD-SMENA 182
           MGLSSLP PSEG+L VILVNTALSISI KGIVRS L +VGI L  S + PSS   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 183 --PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSC-KWLEHDCSVCLTQFEPESEINHLS 242
              ES +F +    SY+EEF +R P + F+ +  C K  +++CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 243 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--VPEEDTAS 275
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  VPE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]
BLAST of CcUC02G027850 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 8.6e-45
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPD-SMENA 182
           MGLSSLP PSEG+L VILVNTALSISI KGIVRS L +VGI L  S + PSS   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 183 --PESIEFHLNPNGSYIEEFHSRIPAILFDKVHSC-KWLEHDCSVCLTQFEPESEINHLS 242
              ES +F +    SY+EEF +R P + F+ +  C K  +++CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 243 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--VPEEDTAS 275
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  VPE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]
BLAST of CcUC02G027850 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 0 

Query: 132 SEGVLGVILVNTALSISIFKGIVRSILHVVGI--HLLSSPTLPSSPDSMENAPESIEFHL 191
           +E  L  + V T   +   + IV SI   +G+   L    T P         PE+     
Sbjct: 8   TEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIPET----R 67

Query: 192 NPNGSYIEEFHSRIPAILFDKV-HSCKWLEHDCSVCLTQFEPESEINHL-SCGHLFHRVC 251
           +P  + +      +P I F+++ +S + L  +C+VCL +FE E EI  L +C H+FHR C
Sbjct: 68  SPFSALL--IREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSC 127

Query: 252 LEKWLDYWNLTCPLCRTPLVPEE 271
           L++W+D+   TCPLCRTP VP+E
Sbjct: 128 LDRWMDHDQKTCPLCRTPFVPDE 144

[Close]
BLAST of CcUC02G027850 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 0 

Query: 123 MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLLSSPTLPSSPDSMENAP 182
           MG+S  P  SEGV+ ++++NT +S+S+ K +VRS++++V      +       D  E++ 
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDH-EDSK 60

Query: 183 ESIEFHLNPNGSYIEEFHSRIPAILFDKVHSCKWLEHDCSVCLTQFEPESEINHL-SCGH 242
                 +    S  E   SR                 DC VCL  F+ E E++ L SC H
Sbjct: 61  RRRRISITHFESLCENRGSRNEREAM-----------DCCVCLCGFKEEEEVSELVSCKH 120

Query: 243 LFHRVCLEKWLDYWNLTCPLCRTPL 267
            FH  CL+KW    + TCPLCR+ L
Sbjct: 121 YFHSACLDKWFGNNHTTCPLCRSIL 133

[Close]
BLAST of CcUC02G027850 vs. TAIR 10
Match: AT2G01150.1 (RING-H2 finger protein 2B )

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 220 DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVP 269
           DC VCL++ +   E+  L C H+FH+ CLE WL + N  CPLCR+PL+P
Sbjct: 73  DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121

The following BLAST results are available for this feature:
BLAST of CcUC02G027850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7010803.11.7e-9575.49putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma sub... [more]
XP_004139989.13.7e-8297.40probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742532.1 pr... [more]
XP_038900972.13.5e-8094.81probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida] >XP_038900973.1 ... [more]
XP_008448128.13.8e-7995.48PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo] >KAA006084... [more]
KAG6570965.11.9e-7894.81putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma sub... [more]
BLAST of CcUC02G027850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SI091.2e-4359.49Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X... [more]
Q9XF922.2e-1334.97Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH... [more]
Q9ZU511.8e-1051.02E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ... [more]
Q9ZT502.3e-1042.86E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ... [more]
Q8LDB82.8e-0846.15E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
BLAST of CcUC02G027850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAU41.8e-8297.40RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G113550 P... [more]
A0A5D3DTM01.9e-7995.48Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BIY91.9e-7995.48probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103490... [more]
A0A6J1FXQ99.2e-7994.81probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JEA72.0e-7894.16probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of CcUC02G027850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04240.18.6e-4559.49RING/U-box superfamily protein [more]
AT2G04240.28.6e-4559.49RING/U-box superfamily protein [more]
AT3G61460.11.6e-1434.97brassinosteroid-responsive RING-H2 [more]
AT1G67856.13.5e-1433.10RING/U-box superfamily protein [more]
AT2G01150.11.3e-1151.02RING-H2 finger protein 2B [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 221..262
e-value: 5.0E-6
score: 36.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 220..263
e-value: 2.6E-10
score: 40.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 221..263
score: 12.784338
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 188..268
e-value: 7.4E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR47258:SF1E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATEDcoord: 123..276
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 210..269
IPR044249Probable E3 ubiquitin-protein ligase XERICO-likePANTHERPTHR47258FAMILY NOT NAMEDcoord: 123..276

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G027850.1CcUC02G027850.1mRNA