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CcUC02G027430 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAATCAGGCGGCGGCGGCTACAAAGTCATTGGCTGTGGATGCGCCGTTCCCTTCCCCCACGGCATCGCTTGCAGGTATGCGAATTCAAAGGCACCGGTGGGAGGAGAGATGGCGCAGTGGAGATGCCCATGCGGGGAGTACTGTGACTGTAACCCCTGCACCTGTCCCGGCACGGAAAGGGTAATTGCAGCTGTGGCGAGAACTGCCGGTGTGAAACATGAGAGTTTGGATGAAACCAAATACGAAAACGACGACGTTTTGGCCTGA ATGGCAGAATCAGGCGGCGGCGGCTACAAAGTCATTGGCTGTGGATGCGCCGTTCCCTTCCCCCACGGCATCGCTTGCAGGTATGCGAATTCAAAGGCACCGGTGGGAGGAGAGATGGCGCAGTGGAGATGCCCATGCGGGGAGTACTGTGACTGTAACCCCTGCACCTGTCCCGGCACGGAAAGGGTAATTGCAGCTGTGGCGAGAACTGCCGGTGTGAAACATGAGAGTTTGGATGAAACCAAATACGAAAACGACGACGTTTTGGCCTGA ATGGCAGAATCAGGCGGCGGCGGCTACAAAGTCATTGGCTGTGGATGCGCCGTTCCCTTCCCCCACGGCATCGCTTGCAGGTATGCGAATTCAAAGGCACCGGTGGGAGGAGAGATGGCGCAGTGGAGATGCCCATGCGGGGAGTACTGTGACTGTAACCCCTGCACCTGTCCCGGCACGGAAAGGGTAATTGCAGCTGTGGCGAGAACTGCCGGTGTGAAACATGAGAGTTTGGATGAAACCAAATACGAAAACGACGACGTTTTGGCCTGA MAESGGGGYKVIGCGCAVPFPHGIACRYANSKAPVGGEMAQWRCPCGEYCDCNPCTCPGTERVIAAVARTAGVKHESLDETKYENDDVLA Homology
BLAST of CcUC02G027430 vs. NCBI nr
Match: XP_011658404.1 (metallothionein-like protein 4A [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 41/68 (60.29%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of CcUC02G027430 vs. NCBI nr
Match: XP_008448405.1 (PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothionein-like protein 4A [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 2.4e-11 Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of CcUC02G027430 vs. NCBI nr
Match: XP_023513130.1 (metallothionein-like protein 4A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of CcUC02G027430 vs. NCBI nr
Match: OVA00630.1 (Plant EC metallothionein-like protein [Macleaya cordata]) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09 Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of CcUC02G027430 vs. NCBI nr
Match: XP_038876665.1 (metallothionein-like protein 4A [Benincasa hispida]) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09 Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy Swiss-Prot
Match: Q42377 (Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 1.8e-09 Identity = 30/75 (40.00%), Postives = 37/75 (49.33%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy Swiss-Prot
Match: P93746 (Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy Swiss-Prot
Match: Q109B0 (Class II metallothionein-like protein 1A OS=Oryza sativa subsp. japonica OX=39947 GN=MT21A PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07 Identity = 26/59 (44.07%), Postives = 31/59 (52.54%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy Swiss-Prot
Match: P43401 (EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 8.3e-07 Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy Swiss-Prot
Match: P30569 (EC protein I/II OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 9.2e-06 Identity = 22/45 (48.89%), Postives = 27/45 (60.00%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy TrEMBL
Match: A0A5D3CS48 (Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00240 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11 Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy TrEMBL
Match: A0A0A0KFY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118310 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11 Identity = 41/68 (60.29%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy TrEMBL
Match: A0A1S3BJL5 (metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11 Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy TrEMBL
Match: A0A200PQZ1 (Plant EC metallothionein-like protein OS=Macleaya cordata OX=56857 GN=BVC80_9085g40 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09 Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of CcUC02G027430 vs. ExPASy TrEMBL
Match: A0A6J1J5Z9 (metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of CcUC02G027430 vs. TAIR 10
Match: AT2G23240.2 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 63.5 bits (153), Expect = 9.7e-11 Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0
BLAST of CcUC02G027430 vs. TAIR 10
Match: AT2G23240.1 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10 Identity = 30/75 (40.00%), Postives = 37/75 (49.33%), Query Frame = 0
BLAST of CcUC02G027430 vs. TAIR 10
Match: AT2G42000.1 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 60.5 bits (145), Expect = 8.2e-10 Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of CcUC02G027430 vs. TAIR 10
Match: AT2G42000.2 (Plant EC metallothionein-like protein, family 15 ) HSP 1 Score: 60.5 bits (145), Expect = 8.2e-10 Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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