![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G027380 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTTTGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCCTGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCGGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCGCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAACAAGCGAGCTTTTTACCCTCAAATTCAAACATGTGGGCGCAAAATGCTATCCTGCTCTATTGTTGCGTAGCAATAGAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTTGTTCGTAA ATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTTTGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCCTGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCGGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCGCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTTGTTCGTAA ATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTTTGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCCTGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCGGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCGCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTTGTTCGTAA MSFAPLGSRRSRGSREGKRTHPLLHLARDDKERASSIDEQRIDGTLGIALFFSPFLSASFDPFVRNFFVRTEPLAESNPVPQDPISAIHPPCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCKPAHAASAALFRLLFALDGRASGHGEGAGEACCS Homology
BLAST of CcUC02G027380 vs. NCBI nr
Match: YP_009913607.1 (cytochrome c biogenesis FN [Luffa acutangula] >QLJ93007.1 cytochrome c biogenesis FN [Luffa acutangula]) HSP 1 Score: 282.3 bits (721), Expect = 2.8e-72 Identity = 144/155 (92.90%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of CcUC02G027380 vs. NCBI nr
Match: TXG46730.2 (cytochrome c biogenesis FN [Acer yangbiense]) HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71 Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of CcUC02G027380 vs. NCBI nr
Match: TXG46220.1 (hypothetical protein EZV62_028251 [Acer yangbiense]) HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71 Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of CcUC02G027380 vs. NCBI nr
Match: QHE65814.1 (cytochrome c biogenesis FN [Castanospermum australe]) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71 Identity = 142/155 (91.61%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC02G027380 vs. NCBI nr
Match: QEX95847.1 (cytochrome c biogenesis FN [Cercis canadensis]) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71 Identity = 142/155 (91.61%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy Swiss-Prot
Match: Q04647 (Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 4.0e-66 Identity = 132/155 (85.16%), Postives = 134/155 (86.45%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy Swiss-Prot
Match: Q9T6H8 (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidopsis thaliana OX=3702 GN=CCMFN1 PE=1 SV=3) HSP 1 Score: 239.6 bits (610), Expect = 2.7e-62 Identity = 127/151 (84.11%), Postives = 129/151 (85.43%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy Swiss-Prot
Match: Q04648 (Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 SV=3) HSP 1 Score: 217.2 bits (552), Expect = 1.4e-55 Identity = 121/155 (78.06%), Postives = 125/155 (80.65%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy Swiss-Prot
Match: P36180 (Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=YMF4 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20 Identity = 61/107 (57.01%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy TrEMBL
Match: A0A7D6BZF6 (Cytochrome c biogenesis FN OS=Luffa acutangula OX=56866 GN=ccmFn PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.3e-72 Identity = 144/155 (92.90%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy TrEMBL
Match: A0A5C7GNR1 (Cytochrom_C_asm domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_028251 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 8.6e-72 Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy TrEMBL
Match: A0A5C7GQ89 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027804 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 8.6e-72 Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy TrEMBL
Match: A0A5J6NL50 (Cytochrome c biogenesis FN OS=Cercis canadensis OX=49801 GN=ccmFn PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71 Identity = 142/155 (91.61%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC02G027380 vs. ExPASy TrEMBL
Match: A0A6B9QFN5 (Cytochrome c biogenesis FN OS=Castanospermum australe OX=24962 GN=ccmFn PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71 Identity = 142/155 (91.61%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CcUC02G027380 vs. TAIR 10
Match: ATMG00830.1 (cytochrome C biogenesis 382 ) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69 Identity = 134/151 (88.74%), Postives = 136/151 (90.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|