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CcUC02G027190 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCATCGTGAGTGATCCTGTCCTTAGAATGCGGGGCGAAACACATGTGTCATTGGACACTTCACCATCTCCTCCCGTCAAAATCATTTTCCACATCCGGATGGCAAAGATTATCACTTGAACGGATAAGGATCTACCGAAGGCAGGAATGAACAATAACAAAGCCTTACACATTCAAGTGATCACTACAGGGAAAAGGGTGCCAATGGTTCTGGTTGACAATGGATTGGCCTTGAACGTGTGCCCATTCAGAACTGCCACTTGCTTAAGATATCAGCAAAAAGATTTCGCAGTCTTAGCGCAGGCCATTAGAGCATATGACAACACAGGGGGGTAATGGGCATCCTGGCCTTAGAATGAACTGCAGGGCCGGTCCTGTTTAAGGAAAAATTCCAGGTACTAGACATCCCGACTTCCTTCAACCTGCTACTTGGAAGGCCGTGGATTCATGCCAGAGAAGCGGTCCCCTCTACTTTGCATCATCAAGTCGACGTTCATACAGGGGAATCATTCAATTTCGATCTTTGGAGATCCAGAAGAGCCGGTGCTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCGAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATGTTCCGATCAATGCGCCACCTCCCCGGATCAGGACTCGGCCGGCGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGGAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCGTAAGAAAGCTTTTAAATATCTTCAGACTCTGAATGGGCGATTAGTCAAAGAAAGATATAACTTTCCCTTTTTCGGTTTTCCGGAGCCATGGATCGATGCTAGCGGGAACCGCGTGCCGGGTTTCTAAATCAATATTCTTTACAGATAAAGTAACCTGGAAGCTTGATGAGGGGAAAGCAAAAATGATCGACCAGTGGGAAGAACCAGGGATCTTGACCTGGTATCCAGAGAAGAAAGAAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACCCAGGACGGTGCGGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACGCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTCAGTGTTCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGATGATGAGAAAGAAAAAGGAATATCGAAAAAAAGGAAGAAAACAAATAGCAGACCTTAGCTCCCCTTCCAATGATCACTGCCTCATGCAGGTAGATGAGGAAGAAACCTATGTTGAAACTCCTCCTTCACTCTTGGAAATGGTGGAGAGATCAGAGGAAAGGAAGGCTCAACCCGTCATGGAAGAAACCCAACCCATTCATTTAGGGACCGCAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAACGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTCCTACGATGATATGCCTGGACTCAGCACAGACAGAATTTCGAAAAAAATCCCTTTGTATCCTTGATGCCAAGCCAGTCAAGCAGAAACTTTGGAGAATGAGGCCCGAATAGACATTTGAAAATCAAAGAGGAAGTAGAGAAGCAGCTAAAGGCAGGATTTCTTGTAGTGACGGAATACCCCGAATGGTTAGCCAACATAGTTCCTGTCCCGAAAAAGGACGGCAGAGTCCGCATGTGCGTTGACTTTCGTGACCTCAACAAAGCCGGTCCCAAGGATGATTTCCCTTTGCCACACATTGACATCTTGGTTGACAATAAAGCGGGGCATGAATTATTAGATGGGTTCTCAGGGTACAATCAAATAAAGATGGCGCCAGAAGATATGCATAAAACCTCAGTATTCCCCAGTGGGGAACATTTTGCTACCGTGTCATGTCTTTCGGTCTCAAACTGGGGCAACAACGTTACATATACCATACTGCTATGACTGTAATCTTTCACGATATGATGCATGTATTATAATAAATGTTGAGGTGTACGTCGACGATATACTTTTCAAATCCAAGACAGGAGAAGGACATCCGGAAGCTCTACAAAGGGTTCTTGAAAGATCAAGAAAATCTCAGTTGAAGATGAACCCCCTAGGTAATAGTATCGTGCGCCTTCGAAGTAACATCAGGGAAATTTCTTGGTTATTTGGTGAATCGACAAGGCACGAATGTAGACCCAGCTAAAACAAAAGCAGTGCTCGATATGCCAGAGCCAACCTCAGCGAAAGAGTTTCAGTCATTTTTAGGAAAAGCTTCCTACTTGAGAAGGTTCTTACCAGGATTAGCAGCCTTATCGGCCCCTCTTATGGAATTGCTAAAGAAAAAGGTAGAGTACAAATGGGAAGAGGTCCATCGACAAGCCTTTGCGAAAATCAAGGAGACCTTAGCGAACGCCCCAGTGATGATGGCTCCAATAGCAGGTAAGGAACGTTAGCTATATCTTGCTTTTAATGATAATGCTATCGGAATAGTGCTAGCGCAGGATGATCAAAATGGTCAAGAAAAGCCAATATACTATGCTTGCTAGTAGAATTCTCAAAGAAGCTGAAGCGTTATACACTAAAGCAGAGAAAAATCGTTTAGCGCTTATATATTTATATGCAGCCAAAAAGTTAAGACATTATATGTTGGCGCACAAGATAAAGTAGGTTGTCGGGGCTAATCCGATAAAGGTACTTGCTGTCAAGGCCAGCCCTATCGGGAAGGACAGTGCGCTGGTTGTTACAGCTGTCAGAATTTGACATTGAATGTTTCACTCCTTTTTTTGCGATAAAGGATGCGATAAAGGGGCAACTTTTTGCAGATCTACTGGCCCATCAAAAGACCCTATCGAGCTTTCTTCAGAAATTCCTGGTGATCTCGAACAGATTGCAACATTAGAAGATGGGCAATGGACCTTATACTTTGATGAATCATCCACAGCCAAGGAAGAAGGTGGTGTAGGAATCGTTTTTAAAATCATCAAAAGGAGAGTCCACATCTTTATCGTTTTCATTTTCGTTTCCATGCTCTAATAAGAGTTCATAATATGAGGCCTTAGCGATAGGGTTGTCTATCGCTAAAGAAATGAAGATCAAGAAGTTCAAAGTGGTTGGTGACTCAAATTTGGCGGTTCAACAAACAGATGGGACATTTGCACTGAAGGAGATTTCCCTAGCACTTTATCAGTTCCTTGTGCTGAAGCTGTGTTATGAAATTGATGTGGAATTAACCCATGTCAACAGGTCTACCAATCGACATGCTGATTCTTTGGCCACTCTAGCTTCAAAGATCAAGTTTGAAGATGATGAAGCTGTCATTCATTAAGATTAGCAAGCGACGAACTCCAGCTCATGGAACTTTCACGATAAGCTATATGAAGATGTCATTAAAGAAGGAGATGTTCGACATGCTGTGATTTAAGAACTAAAGCAATCAGTGTCGTCAGTGCACATGGCCAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTCCGATGGGGTCTTAGCTCGGTGCCTTAGCGTTGAAGAAGCAGCAAAGAGACTTGAAGAAGTTCATGATAAGGTCTGTGGGACAACAACACCGATAAAGGTCTCTACAGAAGATTGCAAAGACAAGGTTACTATTGGCCCTAGCCTGATATGA ATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCATCTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCGAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATGTTCCGATCAATGCGCCACCTCCCCGGATCAGGACTCGGCCGGCGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGGAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCAGAAGAAAGAAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACCCAGGACGGTGCGGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACGCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTCAGTGTTCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTAGATGAGGAAGAAACCTATGTTGAAACTCCTCCTTCACTCTTGGAAATGGTGGAGAGATCAGAGGAAAGGAAGGCTCAACCCGTCATGGAAGAAACCCAACCCATTCATTTAGGGACCGCAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAACGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTCCTACGATGATATGCCTGGACTCAGCACAGACAGAATTTCGAAAAAAATCCCTTTGTTCTTACCAGGATTAGCAGCCTTATCGGCCCCTCTTATGGAATTGCTAAAGAAAAAGGTAGAGTACAAATGGGAAGAGGTCCATCGACAAGCCTTTGCGAAAATCAAGGAGACCTTAGCGAACGCCCCAGTGATGATGGCTCCAATAGCAGGATGCGATAAAGGGGCAACTTTTTGCAGATCTACTGGCCCATCAAAAGACCCTATCGAGCTTTCTTCAGAAATTCCTGGTGATCTCGAACAGATTGCAACATTAGAAGATGGGCAATGGACCTTATACTTTGATGAATCATCCACAGCCAAGGAAGAAGGGTTGTCTATCGCTAAAGAAATGAAGATCAAGAAGTTCAAAGTGGTTGGTGACTCAAATTTGGCGGTTCAACAAACAGATGGGACATTTGCACTGAAGGAGATTTCCCTAGCACTTTATCAGTTCCTTGTGCTGAAGCTGTGTTATGAAATTGATGTGGAATTAACCCATGTCAACAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTCCGATGGGGTCTTAGCTCGGTGCCTTAGCGTTGAAGAAGCAGCAAAGAGACTTGAAGAAGTTCATGATAAGGTCTGTGGGACAACAACACCGATAAAGGTCTCTACAGAAGATTGCAAAGACAAGGTTACTATTGGCCCTAGCCTGATATGA ATGGACTCCGACGAACTGGATCAATACGGCACCAATGATGATATGGATTTTGTCAACAATGAGGAGGCCCAACACATGGCATCTAAGAGCCATCTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAGTTCGAGCAAGTGCAGGTCATTGAGTTGGCAGAACCAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATGTTCCGATCAATGCGCCACCTCCCCGGATCAGGACTCGGCCGGCGTCACCAAGGAATCGTGGAGCCAATTCATGTCCAGGCAATTGAGCCACCTTTTGGGTTGGGGTATATACCTACGGAAGAAGATCTCCAAAAATTGGAAGACAAGAAGAAGAAAAAGAAGAATAAGAGTCTCAGAAGAAAGAAGAAAAGGAAGGCTGTTGAATCAGAGATTGAGGAAGAATACCAGCTTCAACTTATGTTTACCCAGGACGGTGCGGCAGGGGAACAAGGGATGGTGTCCATGAAAATTGCGAACCCAGTGGCAAAAGACCCATCCACTCTCATCATCCCAACCGATGGAGCACCACGCAATTGGTCTTCTCTTCCTCAGCTTCAGTCTTTCAGTGTTCGAGATGAACCAGTCTTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTAGATGAGGAAGAAACCTATGTTGAAACTCCTCCTTCACTCTTGGAAATGGTGGAGAGATCAGAGGAAAGGAAGGCTCAACCCGTCATGGAAGAAACCCAACCCATTCATTTAGGGACCGCAGACGAACCCCAAGAGGTTAGGATAGGAACCACTTTGACTCTCGAAGAACGGCTTGACCTTTTGAAAGAATACAAGGATGCCTTTGCATGGTCCTACGATGATATGCCTGGACTCAGCACAGACAGAATTTCGAAAAAAATCCCTTTGTTCTTACCAGGATTAGCAGCCTTATCGGCCCCTCTTATGGAATTGCTAAAGAAAAAGGTAGAGTACAAATGGGAAGAGGTCCATCGACAAGCCTTTGCGAAAATCAAGGAGACCTTAGCGAACGCCCCAGTGATGATGGCTCCAATAGCAGGATGCGATAAAGGGGCAACTTTTTGCAGATCTACTGGCCCATCAAAAGACCCTATCGAGCTTTCTTCAGAAATTCCTGGTGATCTCGAACAGATTGCAACATTAGAAGATGGGCAATGGACCTTATACTTTGATGAATCATCCACAGCCAAGGAAGAAGGGTTGTCTATCGCTAAAGAAATGAAGATCAAGAAGTTCAAAGTGGTTGGTGACTCAAATTTGGCGGTTCAACAAACAGATGGGACATTTGCACTGAAGGAGATTTCCCTAGCACTTTATCAGTTCCTTGTGCTGAAGCTGTGTTATGAAATTGATGTGGAATTAACCCATGTCAACAGGAAAGACTTGAAATGCTTCACAAAATGTTGTGGCAATTTGGACTACAAGATGTCCGATGGGGTCTTAGCTCGGTGCCTTAGCGTTGAAGAAGCAGCAAAGAGACTTGAAGAAGTTCATGATAAGGTCTGTGGGACAACAACACCGATAAAGGTCTCTACAGAAGATTGCAAAGACAAGGTTACTATTGGCCCTAGCCTGATATGA MDSDELDQYGTNDDMDFVNNEEAQHMASKSHLREIQHDENLELAGFQFEQVQVIELAEPVKEYLALPDFSDNVFVREMFRSMRHLPGSGLGRRHQGIVEPIHVQAIEPPFGLGYIPTEEDLQKLEDKKKKKKNKSLRRKKKRKAVESEIEEEYQLQLMFTQDGAAGEQGMVSMKIANPVAKDPSTLIIPTDGAPRNWSSLPQLQSFSVRDEPVLVKSVESLFNVTSSEDGLQSVPSVSVIISEVESALEARESVIKELVVCNEMKSRVDEEETYVETPPSLLEMVERSEERKAQPVMEETQPIHLGTADEPQEVRIGTTLTLEERLDLLKEYKDAFAWSYDDMPGLSTDRISKKIPLFLPGLAALSAPLMELLKKKVEYKWEEVHRQAFAKIKETLANAPVMMAPIAGCDKGATFCRSTGPSKDPIELSSEIPGDLEQIATLEDGQWTLYFDESSTAKEEGLSIAKEMKIKKFKVVGDSNLAVQQTDGTFALKEISLALYQFLVLKLCYEIDVELTHVNRKDLKCFTKCCGNLDYKMSDGVLARCLSVEEAAKRLEEVHDKVCGTTTPIKVSTEDCKDKVTIGPSLI Homology
BLAST of CcUC02G027190 vs. NCBI nr
Match: XP_012436090.1 (PREDICTED: uncharacterized protein LOC105762750 [Gossypium raimondii]) HSP 1 Score: 235.7 bits (600), Expect = 1.0e-57 Identity = 143/238 (60.08%), Postives = 148/238 (62.18%), Query Frame = 0
BLAST of CcUC02G027190 vs. NCBI nr
Match: EEF27092.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 214.2 bits (544), Expect = 3.1e-51 Identity = 131/188 (69.68%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of CcUC02G027190 vs. NCBI nr
Match: EEF25156.1 (conserved hypothetical protein, partial [Ricinus communis]) HSP 1 Score: 119.0 bits (297), Expect = 1.4e-22 Identity = 61/80 (76.25%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of CcUC02G027190 vs. NCBI nr
Match: XP_028230411.1 (uncharacterized protein LOC114410658 [Glycine soja]) HSP 1 Score: 117.5 bits (293), Expect = 4.0e-22 Identity = 115/398 (28.89%), Postives = 188/398 (47.24%), Query Frame = 0
BLAST of CcUC02G027190 vs. NCBI nr
Match: CAN67148.1 (hypothetical protein VITISV_008839 [Vitis vinifera]) HSP 1 Score: 106.7 bits (265), Expect = 7.0e-19 Identity = 106/395 (26.84%), Postives = 185/395 (46.84%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy Swiss-Prot
Match: Q9TTC1 (Gag-Pol polyprotein OS=Koala retrovirus OX=394239 GN=pro-pol PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 4.1e-06 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy Swiss-Prot
Match: P03359 (Gag-Pol polyprotein OS=Woolly monkey sarcoma virus OX=11970 GN=pol PE=3 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 6.0e-05 Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy Swiss-Prot
Match: P21414 (Gag-Pol polyprotein OS=Gibbon ape leukemia virus OX=11840 GN=pol PE=3 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-04 Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy TrEMBL
Match: B9TAM0 (G-patch domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_2021640 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.5e-51 Identity = 131/188 (69.68%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy TrEMBL
Match: A0A2N9FBB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12365 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.2e-24 Identity = 92/253 (36.36%), Postives = 127/253 (50.20%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy TrEMBL
Match: A0A2N9G5X7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22356 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.0e-24 Identity = 92/301 (30.56%), Postives = 136/301 (45.18%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy TrEMBL
Match: A0A2N9HB09 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37194 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.9e-23 Identity = 93/308 (30.19%), Postives = 136/308 (44.16%), Query Frame = 0
BLAST of CcUC02G027190 vs. ExPASy TrEMBL
Match: B9TG58 (G-patch domain-containing protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2070490 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.6e-23 Identity = 61/80 (76.25%), Postives = 63/80 (78.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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