![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G027100 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTCCTCTGTTTCCTTTCAACGCTTTCCCTCCCACTTCTCCTTCCCATTTATCTCCAAATCCCCGCCGGAAACGGACTAAATTCATCAAAACAACCACTTCCGGCAACCCCAAGCACCGGAAGAAAGCGGAGCCTACCGCTTCCAACAACATCACTCCGCCCTGTTCAGAGTGCGGCAAGAAATTCTGGTCATGGAAGGCTCTCTTCGGTCACATGCGTTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCACCCCCTAATTTCCTTCGCCCTTCCGGGGCCGCCTCTCAATTACAACAAGATCACGAGATCGCTGCCTCTTTGATCATGCTTGCCAATGCTCCATCAGATGGCAGTCGGGGAACGGCTGAGGATTACAAACGCAAGTCATATTCTGGAATTTTGGACTTGAACTTGCCTCCTTCTCCAATGGAGGAGATTGAACAAGAATCTTCATCTTCTTATTCATCAGGGATTGTTTTGGATCTCAGATTAGGGCTTAATTAG ATGGATTCTCCTCTGTTTCCTTTCAACGCTTTCCCTCCCACTTCTCCTTCCCATTTATCTCCAAATCCCCGCCGGAAACGGACTAAATTCATCAAAACAACCACTTCCGGCAACCCCAAGCACCGGAAGAAAGCGGAGCCTACCGCTTCCAACAACATCACTCCGCCCTGTTCAGAGTGCGGCAAGAAATTCTGGTCATGGAAGGCTCTCTTCGGTCACATGCGTTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCACCCCCTAATTTCCTTCGCCCTTCCGGGGCCGCCTCTCAATTACAACAAGATCACGAGATCGCTGCCTCTTTGATCATGCTTGCCAATGCTCCATCAGATGGCAGTCGGGGAACGGCTGAGGATTACAAACGCAAGTCATATTCTGGAATTTTGGACTTGAACTTGCCTCCTTCTCCAATGGAGGAGATTGAACAAGAATCTTCATCTTCTTATTCATCAGGGATTGTTTTGGATCTCAGATTAGGGCTTAATTAG ATGGATTCTCCTCTGTTTCCTTTCAACGCTTTCCCTCCCACTTCTCCTTCCCATTTATCTCCAAATCCCCGCCGGAAACGGACTAAATTCATCAAAACAACCACTTCCGGCAACCCCAAGCACCGGAAGAAAGCGGAGCCTACCGCTTCCAACAACATCACTCCGCCCTGTTCAGAGTGCGGCAAGAAATTCTGGTCATGGAAGGCTCTCTTCGGTCACATGCGTTGCCATCCTGAGCGTCAATGGCGAGGAATCAATCCACCCCCTAATTTCCTTCGCCCTTCCGGGGCCGCCTCTCAATTACAACAAGATCACGAGATCGCTGCCTCTTTGATCATGCTTGCCAATGCTCCATCAGATGGCAGTCGGGGAACGGCTGAGGATTACAAACGCAAGTCATATTCTGGAATTTTGGACTTGAACTTGCCTCCTTCTCCAATGGAGGAGATTGAACAAGAATCTTCATCTTCTTATTCATCAGGGATTGTTTTGGATCTCAGATTAGGGCTTAATTAG MDSPLFPFNAFPPTSPSHLSPNPRRKRTKFIKTTTSGNPKHRKKAEPTASNNITPPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNFLRPSGAASQLQQDHEIAASLIMLANAPSDGSRGTAEDYKRKSYSGILDLNLPPSPMEEIEQESSSSYSSGIVLDLRLGLN Homology
BLAST of CcUC02G027100 vs. NCBI nr
Match: XP_038880579.1 (zinc finger protein ZAT3-like [Benincasa hispida]) HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65 Identity = 137/171 (80.12%), Postives = 146/171 (85.38%), Query Frame = 0
BLAST of CcUC02G027100 vs. NCBI nr
Match: XP_004140060.1 (zinc finger protein ZAT3 [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51 Identity = 118/179 (65.92%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of CcUC02G027100 vs. NCBI nr
Match: KGN46666.2 (hypothetical protein Csa_005720 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 1.5e-46 Identity = 110/172 (63.95%), Postives = 120/172 (69.77%), Query Frame = 0
BLAST of CcUC02G027100 vs. NCBI nr
Match: XP_023512246.1 (zinc finger protein ZAT2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.9 bits (494), Expect = 5.7e-46 Identity = 119/218 (54.59%), Postives = 129/218 (59.17%), Query Frame = 0
BLAST of CcUC02G027100 vs. NCBI nr
Match: XP_022986192.1 (zinc finger protein ZAT3-like [Cucurbita maxima]) HSP 1 Score: 191.8 bits (486), Expect = 4.8e-45 Identity = 119/220 (54.09%), Postives = 131/220 (59.55%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 6.1e-27 Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21 Identity = 63/123 (51.22%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy TrEMBL
Match: A0A0A0KAW8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G118360 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51 Identity = 118/179 (65.92%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy TrEMBL
Match: A0A6J1J6W8 (zinc finger protein ZAT3-like OS=Cucurbita maxima OX=3661 GN=LOC111484009 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.3e-45 Identity = 119/220 (54.09%), Postives = 131/220 (59.55%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy TrEMBL
Match: A0A6J1FVY9 (zinc finger protein ZAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111448614 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44 Identity = 116/204 (56.86%), Postives = 128/204 (62.75%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy TrEMBL
Match: A0A6J1CFB7 (zinc finger protein ZAT3 OS=Momordica charantia OX=3673 GN=LOC111011168 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 79/141 (56.03%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of CcUC02G027100 vs. ExPASy TrEMBL
Match: A0A5J5WZP4 (C2H2-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G185300v1 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.3e-29 Identity = 70/125 (56.00%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of CcUC02G027100 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein ) HSP 1 Score: 122.1 bits (305), Expect = 4.4e-28 Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CcUC02G027100 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22 Identity = 63/123 (51.22%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of CcUC02G027100 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family ) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09 Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CcUC02G027100 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08 Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of CcUC02G027100 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08 Identity = 41/130 (31.54%), Postives = 57/130 (43.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|