
CcUC02G026970 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCGCTCCATGCCGCCGCGCAGCTTGCTCCATGCCACCGCTCAGCTTGCTCCATGCCGCCGCTTCGCCTCTAAGCGCGATCCACGCCTCGCACAAGTCTCAGACTCATGCCCACTGTCGCTTGGCACGCTCCACGCTAACACTTCACCTCTCAACTCGTTCCACATCGTCGCAACACCACTTTCGCACCCACATGCCTGCTCGCCGCCGTTAGAATTTTGCTGCATTTCTTGCTGAGGTAAGTGCTCCATAGACCAACTAAAAGTTACTTCCTTGCTTGAATTTCTCGATAGCTTCCTTAAATTCAGGAGTAGATGGTATGATTTTCCACATCGTGGAGTAAATGGAATAGTTGCAGGGGTCATAGTTGGAGAATATGAATTAATTCGCCGTGTTTACATGGTATTGTATCGCATGTAAGTTCCACTACGAAGTACCAAGTTTTATTCAAATTGAACATTATTGCAAAGCTGAATGACTGACAACAAATTTTGTTTCCCCTCTAAGACCTTCCTGCAGGTCTTCCAATAGGGATCCTGGTGCACGAGCTGCTGATAGCCTCAGTTTGAAAGATCATGGA CTCGCTCCATGCCGCCGCGCAGCTTGCTCCATGCCACCGCTCAGCTTGCTCCATGCCGCCGCTTCGCCTCTAAGCGCGATCCACGCCTCGCACAAGTCTCAGACTCATGCCCACTGTCGCTTGGCACGCTCCACGCTAACACTTCACCTCTCAACTCGTTCCACATCGTCGCAACACCACTTTCGCACCCACATGCCTGCTCGCCGCCGAGTAGATGGTATGATTTTCCACATCGTGGAGTAAATGGAATAGTTGCAGGGGTCATAGTTGGAGAATATGAATTAATTCGCCGTGTTTACATGGTATTGTATCGCATGTCTTCCAATAGGGATCCTGGTGCACGAGCTGCTGATAGCCTCAGTTTGAAAGATCATGGA ATGCCGCCGCGCAGCTTGCTCCATGCCACCGCTCAGCTTGCTCCATGCCGCCGCTTCGCCTCTAAGCGCGATCCACGCCTCGCACAAGTCTCAGACTCATGCCCACTGTCGCTTGGCACGCTCCACGCTAACACTTCACCTCTCAACTCGTTCCACATCGTCGCAACACCACTTTCGCACCCACATGCCTGCTCGCCGCCGAGTAGATGGTATGATTTTCCACATCGTGGAGTAAATGGAATAGTTGCAGGGGTCATAGTTGGAGAATATGAATTAATTCGCCGTGTTTACATGGTATTGTATCGCATGTCTTCCAATAGGGATCCTGGTGCACGAGCTGCTGATAGCCTCAGTTTGAAAGATCATGGA MPPRSLLHATAQLAPCRRFASKRDPRLAQVSDSCPLSLGTLHANTSPLNSFHIVATPLSHPHACSPPSRWYDFPHRGVNGIVAGVIVGEYELIRRVYMVLYRMSSNRDPGARAADSLSLKDHG Homology
BLAST of CcUC02G026970 vs. NCBI nr
Match: XP_038897592.1 (activating signal cointegrator 1 complex subunit 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 114.0 bits (284), Expect = 9.2e-22 Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G026970 vs. NCBI nr
Match: XP_022940705.1 (uncharacterized protein LOC111446220 [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21 Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G026970 vs. NCBI nr
Match: KAG6591418.1 (Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. NCBI nr
Match: XP_022936905.1 (activating signal cointegrator 1 complex subunit 2-like [Cucurbita moschata]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. NCBI nr
Match: XP_022976975.1 (activating signal cointegrator 1 complex subunit 2-like [Cucurbita maxima]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1FRD2 (uncharacterized protein LOC111446220 OS=Cucurbita moschata OX=3662 GN=LOC111446220 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.9e-21 Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1IKZ3 (activating signal cointegrator 1 complex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111477182 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.9e-21 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1FF14 (activating signal cointegrator 1 complex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111443354 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.9e-21 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1CEQ5 (activating signal cointegrator 1 complex subunit 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011005 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.4e-21 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CcUC02G026970 vs. ExPASy TrEMBL
Match: A0A5A7VB30 (Activating signal cointegrator 1 complex subunit 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001520 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.4e-20 Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of CcUC02G026970 vs. TAIR 10
Match: AT1G27752.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 97.8 bits (242), Expect = 6.3e-21 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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