CcUC02G026820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G026820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Nuclear cap-binding protein subunit 2
Location	CicolChr02: 13944498 .. 13950501 (-)
RNA-Seq Expression	CcUC02G026820
Synteny	CcUC02G026820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACAATGAATAAAAATAAACCCTACTGTATTGCCACTTTTTCCTTCTCCACCCATTTCTAATTTAATCAATTTCGCTCGTCTCCCATCTTTTGTAGCAGGCTCGCAAAAGCACATCACCACCCCTAAGTTGCGAGTTTCCTCTTTCGACAGTGTTGTAGTCACAACCCGGTGCGCGAGCAAGACGCCAGCCATCCACTTGCGAGCATTCCCATGCAATTGTAGCAACCTTCGACGACTCGTTCCTCAGCAAAAAAGTGGTAAAACAGCATTCAAGCAACGTTTTCCTCCCTTTCGATGAGGCTTGTCATTTACTCATTGTATTCCGACTGTGGATTTGAGTTACCCACTTATTAACGACCTCTATTATGTTAGGTTAAGTATATTCGAACACTTCCCAGCAAGGATTCGAGTCTGTTTGGCTTTGGATTGATATCGGACACGAACCAGCAATGGTTGAGGCTGCTCAGCGGCGTTCAGTTGCTTTAAGCACTTTTAAACTCTTTTAAGGTGTTTTAGATCCGTTCGTAACCCATGGAAGTTTTTGTTTGTAGACTTTAAACTAGTTCAAGCTCATTTTACTTTCTAGCACAGTTCTAAGCCTATTTGGTGTGTTTCAATAAGTAACACCTCACTTTTGACCTTTTTGAGCTCATTTAACTCTTGGAGACTCTGTTTGTAATTTGAAACTAAGTCGGAGCCTTCGAATTAAGGCTTAAGGTTGTTTTGGTCCGTTTATTCATTTTGACCACTCTTTAAAAGCTCCAATTAAGGTTTCAAATTAGGATCTAAAGTTGGAATCTTCTTTTAATAATTAAAGAGCCTTTTGAATAACTTATGCACACTTTTGAACAATAGGCAAGTGCATTTCTACCAATGGGGTTGTTTATTGTGTAACATGTGGATAGATATTAAACATGGTCTAAAAGTATGATGTGTAGGGTTCCTGCATCTTTGTGAACTTAGGGGTTATGGAGCTTTTTTTCTTTTTTGTTTTTTTTTTTTGTTTTAATATCCGTGAGTGTCTAGGCAAGCTTACGCTCACCTCAACTAATCTCGTTGGACAACCCGCTTGACCCTACAACATTTGGGTGTCAAGGAAATTCGTAAGATATTAAATCCTTGGTAGGTGGTCACCATGGATTGAATCCTTGACCCTGTAGCCCTTTGGTTTATTTTTTTTCTTTTTTCTTTTTAATGTTCTCACTACCATTAGGCTGACCCATGATGGTTTATGGGTTGTGGAGCATGACGCGCCAATTATGTTTTGGTGGCGGAACATGACACATGAATCACGTAAAGGTGGTGAAGCATGACGTATAAATCATGTATGCTGTGATACATTTTTCACTGTACTTGTTTTTGTTGTACCCCTTTGAGCCCCATTATGGTTGGTGTTGTTGCTCTATGGAAACGAAATGTTAACTGTTTGTTGATCAAGGCTAGAAAATTATTATATTTTCTACAGGCAAGAATATTATATCTAATTCCAAAGGCAGAGTAACTTTAAATGCTATTGATGGTAGTTGGACATTAAGACTTTGATCCAACAAGTGCTTATATCTTTTTTTTGACATAACTCAATGGGTAAAAGCACGCTAAACATGTATGGAACTTTTCTAAGTGTTGTAGCTTAGTTTCTAAACTTTAGAACCTCTCTTTTTGTAGCAATGGGCTGATATCGAACCAGTTTGAGCACTTTTCCAACATAGTTTTAAGTCTCTTTCAGTGAGTTTTAAGTACTAAAGTTATGTATAGGCCTTTTTAGACATACTTAAAATGATTTTGATGGTTTCTAATCCTTAGAATCTTGCCAAATCCAAACTATTTAAGTTGAAAATTTTTTGGATCAAAACAAGATTTCAAATCATTTTGATTTTCAAATTTCATGTTTTTTTAATTCATTCCAAACACCAGACATGATTTCAAATCCATTTTGATTTGAAATCCTTCAAAATTTAGTGGTTCCAAACAGGGGGTAAACCTTTGGTTTGTTGAGTGTCTGCTTGTTGCTCTAGCTAAGGTGCGGTTTTGATTTTTGGTGCAGATTTTTTTATTCTAGGGTTCATGGCTTTGCTGTTCAAGGTAAATTGCTTTTTTACTTCCATTTTAGATAACTAAGATCTTTTCCTGCAGTTAGTATTTTATTTCACAGTTAAATTTGTTTTCCACTCCACTAGGTTAATTGGGTGTGTCAAAGATGTCTTTACAAGTTCTATTCGGACATGTTTGATGGAAAAGTTTTATTTTGATTTATTTTATTTGCGAGACTCATTTTGATGCCAAATGTTGCCGTTTTAGTTTGGGCGTTGTGTGGGAGTAGGCTGCTGGTGTTTCAAATTATGTTAAGACATGTTGTGGTGGTAGGCTGGTAGCATCTGTTCAACAACTTTAACCTAGTGCGCTGTCCTGTATAAATTATCTCAACTAATGCAAGTTGTTTCTTATTCCAAAAGGAATTGATTTTGTACCTTATGTTTGTTTAATAGCTTTTGATCGGTATTATAGTTTTGTCACCATTATTTTGAGTTAAGTAGGTTTGGTGAGATTTCAACCTCTAACCTCCTGGTTAGTTGAGGATACATGCCTAAATCTAGTTGAAGTTGGCAAATTTGTGACCATTATGGCAAAGGGTATTCTGATTATTGTTATTACAAATCATAGTGTCTTGATGTTACAATGTTGAGAACCATTCAAAACTCCAATTACTTTGAAAGAAAATCTACAGAAAGGAATTATGTCACATATAAGCAGTTAGATAGATGATATAGATACTTTTTCTATGATTTCTATCTAAGACAAGATTCCTGCTTTCAACTTTATCATTTGTAGGACCCATTGAAGCTATCTGTTTATCGGGATAGAAGATTTCATGGAATACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACAACGGAAGAGCAAGTTTATGAGCTTTTCTTTTGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTGTAAGACTTCGTAGCTCTTCCTAACTAGTAGAACCATCTTAATATACTTTATATCAATATTCAACCAACAATTTTCTACCATGGGAATTAATTACTAAACTTATTTATTTATGTCTCTGCTGTTCAAAACCCTCTATGGTTGATAGAATCATACAAGAGAGTTAGGGGAGGGAGAGAGTAGTCTCTTGAAAACTACCCATATGTGTTACTGACCTTGTTACTTAATTATATGATGATTTTTCTATAGGTACTCTGATTTCTATCAGTGGTCCATTAATGCAGTTTACTACTCTTTTGTTCATAGATATCACTTCATATGCTCCCATAAGATTTTTGATCCTCATGATTGTGACCTGTTTATTGCATAACATTTTGAATACTTGAAAGCAGTTGAGAATGATTGATATATCTTTCTGGGTCGATTTTAACCTTGAGATTATTTGCTCATCTCATGGCTTTAGTACTCATTCTTACAAGAAATGATTTACATATATCTGTCTCTAAGCCTTTCAAATTATTGGGCAAATCCTTTTAAGTGGCTGCTTATTTCATCTTTACTTTGTTAGATACTATTCTCGAGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTACTGTTTTTCTAATCTATGTCACATTCCTGACTTGGAGTTTACCATCACTTCCTGTTTATTCCTTTTGCTTTGTTGTTCACAGGTGCGTGATGAATATCGAACGGACTATGATCCTGATATCCTTTTTTCTTTTAATACTTTTACTCACTATATAGATTATGGAAACCCACAGTCTGATGCTCTAAAAATTAAATTTCTTTTGCATTTCTTTGGGTACCATTTACCAACCAATATTCGTTTCTCTTTTTTTACATACATGCTTATACATACATACTTAAATATATGTGTGTGTGTAGGATAACAAATATACTTATATAATATTGATTTCAATCACTAATTTTTTTGCACAATGGACACAACATTATGTCAATGTTCCAAAAACCATTACATAGGTATGTTGGGGATGCCTTTTAAAAAAAAATTATATGATGTGTATGTATTGATGTATTTAATACTTCGTAATAGATAAAACATAAATTTAACATAAAAATGAACTTTACTTAACAAAAAACATATAAAACCAAATCAATTACAAAGGTGCAAGGTTTGGTTGGCTGTGGCTGGAGGAAGAAGATATGATCCTAACGGTTTAAGAACGATTTGGAGCATGGGAATTAGATTATGTTATAAGATCCAACTCATTTAGTCTGTTATCACCCTACTGACTTCTCTGTGTGGCATGTGATACATATCCTAGACTTTTGTTGAAATATGTAAGTGCTTTCTGATAGTGTTAATTTTTTTGACACCTCACGTCCTTGAAATTTCACATTTCTTTTTAGTTTCCTTAATTAATTGAACGTAGAGGTGGGTTCGGAAAATTAGTTCAGAAAGAGTTGGAAGAACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCTGCCAGTCATGCCTCAGTGTAAGTTGCTTTGAGGAATGCTCTACATATATATTGTGTATAAACGTGATTTGATGTGCCTTTATTTCATGTTTTTCCTTTTCTCCTGCAGATGGAAAACATGGTGGAAGCCATGAACATGGGCATCGTCATGGTAGAGGTATCAAATTTCTAAAGCATTTTAATCATCTGTGAACGATAATTTATTTGCACTCTGGCATTTTTCTGGTATTTATCGGACTACATTATTGTTGTTTCAAAAACTAGATTACCACCATCATAAGCGCTATCGAGATGATGATCACCATGCTCACAAGAGCTTTAAGAGAACTTCAGATTATGAGTCTAGGAGAAACCCCGATCATGAATCGAGACTGGTAATTTCTAAACAATGCCTCTGCCCTTAGGACTTGTTTGAGAGTGTATTCTAGAAAAAGTGGTCTTTAGTGAAGAGTTTTTATTAAAAGTAATTGTTTTATATTCATTTTAGCATTTGATTCTACACTTTTAGAAGGGAGTTCAATACGAAGTGATTTTGAATGAGTTAATTTTTGAAATAGAATTAATTAAGTGCATGTTTGGGAGTTATTCTTACATTGTTAAAATAACTTTTATCATGTTCCAATCACTCTAAAATATGCTTTTAGTCACTCAAATAATTTAAATATAATTTTCATATCATCAAAATTGGTTTGAAATGATTGGAAGCTTGTTTCAAATGATTTTGAAAATGATAAAATTGACTTTAACCATTCTAGAATAAGACTCAAACATGCCCTTAGTCATTCCAAAATCGACCCAATCATGCCCTTAGTCATTCCAAAATCACTCCATGTCCTTAAGTCATCTTGTGTGCTTAAATTTTCACCGGACGCACCAGATGCCTACAGGCCATATTTCCTTAGTTACAAAAAGCTGGATGTAATTAACAAAATGTCTGTGGCAGTTTGGTCGATGGGCTTTCATTGCGCTTTCAATAAATTCCGTTAACTTCAGTTATCATTATTATGTAAACTGCTTTTCTATGGTTTTGGCTGTATATATTGCTTTGCTTCAGTATTTAACAGTTTGGGCTGTTACAGGAGAAGGATCCAAGGTTTCGGGAGAGTGGCGATTCTGACGAAGAGGATGACAATGGCCAAAAGCAGCGACACTAACCCGAGTGTGATTTTCATATCATAATGTGACGAGGAATCATTTACACTGGTGTTTTGTAGTTGAGCACAAAGTGATAAGGGACAAGTTGGTTACTTGTGCATGTCAAAACTAACGAGTTAATTCTTTTTTCATGCCATTAGGTACTTTGTGCTATTACAAGAATGAAGGAATGATATGAATGGCTGTCTGTACT

mRNA sequence

GAAAACAATGAATAAAAATAAACCCTACTGTATTGCCACTTTTTCCTTCTCCACCCATTTCTAATTTAATCAATTTCGCTCGTCTCCCATCTTTTGTAGCAGGCTCGCAAAAGCACATCACCACCCCTAAGTTGCGAGTTTCCTCTTTCGACAGTGTTGTAGTCACAACCCGGTGCGCGAGCAAGACGCCAGCCATCCACTTGCGAGCATTCCCATGCAATTGTAGCAACCTTCGACGACTCGTTCCTCAGCAAAAAAGTGGTTAAGTATATTCGAACACTTCCCAGCAAGGATTCGAGTCTGTTTGGCTTTGGATTGATATCGGACACGAACCAGCAATGGTTGAGGCTGCTCAGCGGCGTTCAGTTGCTTTAAGCACTTTTAAACTCTTTTAAGGTGTTTTAGATCCGTTCGTAACCCATGGAAGTTTTTGTTTGTAGACTTTAAACTAGTTCAAGCTCATTTTACTTTCTAGCACAGTTCTAAGCCTATTTGGTGTGTTTCAATAAGTAACACCTCACTTTTGACCTTTTTGAGCTCATTTAACTCTTGGAGACTCTGTTTGTAATTTGAAACTAAGTCGGAGCCTTCGAATTAAGGCTTAAGGTTGTTTTGGTCCGTTTATTCATTTTGACCACTCTTTAAAAGCTCCAATTAAGGTTTCAAATTAGGATCTAAAGTTGGAATCTTCTTTTAATAATTAAAGAGCCTTTTGAATAACTTATGCACACTTTTGAACAATAGGCAAGTGCATTTCTACCAATGGGGTTGTTTATTGTGTAACATGTGGATAGATATTAAACATGGTCTAAAAGTATGATGTGTAGGGTTCCTGCATCTTTGTGAACTTAGGGGTTATGGAGCTTTTTTTCTTTTTTGTTTTTTTTTTTTGTTTTAATATCCGTGAGTGTCTAGGCAAGCTTACGCTCACCTCAACTAATCTCGTTGGACAACCCGCTTGACCCTACAACATTTGGGTGTCAAGGAAATTCGTAAGATATTAAATCCTTGGTAGGTGGTCACCATGGATTGAATCCTTGACCCTGTAGCCCTTTGGTTTATTTTTTTTCTTTTTTCTTTTTAATGTTCTCACTACCATTAGGCTGACCCATGATGGTTTATGGGTTGTGGAGCATGACGCGCCAATTATGTTTTGGTGGCGGAACATGACACATGAATCACGTAAAGGTGGTGAAGCATGACGTATAAATCATATTTTTTTATTCTAGGGTTCATGGCTTTGCTGTTCAAGGACCCATTGAAGCTATCTGTTTATCGGGATAGAAGATTTCATGGAATACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACAACGGAAGAGCAAGTTTATGAGCTTTTCTTTTGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGAGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACGGACTATGATCCTGATATCCTTTTTTCTTTTAATACTTTTACTCACTATATAGATTATGGAAACCCACAGTCTGATGCTCTAAAAATTAAATTTCTTTTGCATTTCTTTGGAGGTGGGTTCGGAAAATTAGTTCAGAAAGAGTTGGAAGAACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCTGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCATGAACATGGGCATCGTCATGGTAGAGATTACCACCATCATAAGCGCTATCGAGATGATGATCACCATGCTCACAAGAGCTTTAAGAGAACTTCAGATTATGAGTCTAGGAGAAACCCCGATCATGAATCGAGACTGGAGAAGGATCCAAGGTTTCGGGAGAGTGGCGATTCTGACGAAGAGGATGACAATGGCCAAAAGCAGCGACACTAACCCGAGTGTGATTTTCATATCATAATGTGACGAGGAATCATTTACACTGGTGTTTTGTAGTTGAGCACAAAGTGATAAGGGACAAGTTGGTTACTTGTGCATGTCAAAACTAACGAGTTAATTCTTTTTTCATGCCATTAGGTACTTTGTGCTATTACAAGAATGAAGGAATGATATGAATGGCTGTCTGTACT

Coding sequence (CDS)

ATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGAGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACGGACTATGATCCTGATATCCTTTTTTCTTTTAATACTTTTACTCACTATATAGATTATGGAAACCCACAGTCTGATGCTCTAAAAATTAAATTTCTTTTGCATTTCTTTGGAGGTGGGTTCGGAAAATTAGTTCAGAAAGAGTTGGAAGAACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCTGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCATGAACATGGGCATCGTCATGGTAGAGATTACCACCATCATAAGCGCTATCGAGATGATGATCACCATGCTCACAAGAGCTTTAAGAGAACTTCAGATTATGAGTCTAGGAGAAACCCCGATCATGAATCGAGACTGGAGAAGGATCCAAGGTTTCGGGAGAGTGGCGATTCTGACGAAGAGGATGACAATGGCCAAAAGCAGCGACACTAA

Protein sequence

MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEEQRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTSDYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH

Homology

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BLAST of CcUC02G026820 vs. NCBI nr
Match: KAG7026974.1 (Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.3 bits (843), Expect = 2.5e-86
Identity = 183/271 (67.53%), Postives = 194/271 (71.59%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GG----------------------------QVRDEYRTDYDPDILFSFNTFTHYIDYGNP 120
           GG                            QVRDEYRTDYDPDILFSFNT TH IDY  P
Sbjct: 125 GGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDY-KP 184

Query: 121 QSDALKIKFLL--HFFG-----------------------GGFGKLVQKELEEQRQLVDY 180
            S  L   FL    FFG                       GG+GKLVQKELE QRQLVDY
Sbjct: 185 LSLMLCCIFLELDMFFGMLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDY 244

Query: 181 GTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTSDYESRRN 219
           GT SLGSM PVM Q+G HGGSH HG+RHGRDYHH KR+RDDD HAH+S KRTSD+ESRRN
Sbjct: 245 GTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFESRRN 304

[Close]

BLAST of CcUC02G026820 vs. NCBI nr
Match: XP_004137136.1 (nuclear cap-binding protein subunit 2 [Cucumis sativus] >XP_031739893.1 nuclear cap-binding protein subunit 2 [Cucumis sativus] >KAE8649330.1 hypothetical protein Csa_015022 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 3.6e-85
Identity = 168/218 (77.06%), Postives = 176/218 (80.73%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM PVMPQYGKHGGSH HG+RHGRDYHH KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DYESRRN ++ESR EK+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH 251

[Close]

BLAST of CcUC02G026820 vs. NCBI nr
Match: XP_038900343.1 (nuclear cap-binding protein subunit 2 [Benincasa hispida] >XP_038900344.1 nuclear cap-binding protein subunit 2 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.6e-85
Identity = 170/217 (78.34%), Postives = 175/217 (80.65%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM PVM QYGKHGGSH HGHRHGRDYHH KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSM-PVMTQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           DYESRRNPDH+SR EK+PRFRESGDSDEEDD+ QKQR
Sbjct: 245 DYESRRNPDHDSRPEKNPRFRESGDSDEEDDDDQKQR 249

[Close]

BLAST of CcUC02G026820 vs. NCBI nr
Match: XP_008464581.1 (PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 4.6e-85
Identity = 168/218 (77.06%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM PVM QYGKHGGSH HGHRHGRDYHH KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DYESRRN ++ESR EK+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH 251

[Close]

BLAST of CcUC02G026820 vs. NCBI nr
Match: XP_022140633.1 (nuclear cap-binding protein subunit 2 [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-83
Identity = 165/217 (76.04%), Postives = 174/217 (80.18%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGS+ PV+PQYGKHGG H HGHRHGRDY H KRYRDDDHHAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRDDDHHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           DYESRRNPDHESR EK+PRFRESGDSDEEDD+ +KQR
Sbjct: 245 DYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR 249

[Close]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot
Match: Q9XFD1 (Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CBP20 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-62
Identity = 134/223 (60.09%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWGRGRS
Sbjct: 65  MGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDP-------------------------------ARGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMP-QYG---KHGGSHEHG--HRHGRDYHHHKRYRDDDHHAHK 180
           QRQLVDYGTGSLG+     P  YG   + GG++  G  +RHGR  +H KR RDDD +   
Sbjct: 185 QRQLVDYGTGSLGAYPQAAPTNYGNGRRGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRD 244

Query: 181 SFKRTSDYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           + +R +D+ESRR+ D + R EK+PRFRESGDSD++ ++ +K+R
Sbjct: 245 NSRRNTDHESRRDTDSDMRPEKNPRFRESGDSDDDGEDDRKRR 256

[Close]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot
Match: Q84L14 (Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CBP20 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-51
Identity = 123/220 (55.91%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GK+VQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKMVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLP-VMPQYGKHGGSHEHG--HRHGRDYHHHKRYRDDDHHAHKSFK 180
           QR+LVDYG    G+  P   PQY +      +G  +R+ RDY   KRYR+D+    +S +
Sbjct: 185 QRELVDYG----GAFQPNAPPQYDRGDRKRGYGDSYRNDRDY-QRKRYRNDE----RSSQ 241

Query: 181 RTSDYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           R  D E +R+       EK+PRFRE GDSDEEDD+  K+R
Sbjct: 245 RAPDSEFKRDAIDS---EKNPRFREKGDSDEEDDDYDKRR 241

[Close]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot
Match: B7P877 (Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis OX=6945 GN=Cbp20 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLD+  KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+S
Sbjct: 59  MGLDRFHKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFVEGRQFGRGKS 118

Query: 61  GGQVRDEYRTDYD 74
           GGQVRDEYRTDYD
Sbjct: 119 GGQVRDEYRTDYD 131

[Close]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot
Match: Q1HE01 (Nuclear cap-binding protein subunit 2 OS=Bombyx mori OX=7091 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDK  KTPCGFCFV YY+RED E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++
Sbjct: 61  MGLDKYKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKT 120

Query: 61  GGQVRDEYRTDYD 74
           GGQVRDEYRTDYD
Sbjct: 121 GGQVRDEYRTDYD 133

[Close]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot
Match: Q3ZBJ1 (Nuclear cap-binding protein subunit 2 OS=Bos taurus OX=9913 GN=NCBP2 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.1e-26
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRS
Sbjct: 71  MGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRS 130

Query: 61  GGQVRDEYRTDYD 74
           GGQVRDEYR DYD
Sbjct: 131 GGQVRDEYRQDYD 143

[Close]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL
Match: A0A0A0KVX7 (Nuclear cap-binding protein subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G129020 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.0e-90
Identity = 174/218 (79.82%), Postives = 182/218 (83.49%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDPDILFSF                           GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPDILFSFQE-------------------------GGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM PVMPQYGKHGGSH HG+RHGRDYHH KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DYESRRN ++ESR EK+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH 257

[Close]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL
Match: A0A1S3CLT9 (Nuclear cap-binding protein subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502423 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 168/218 (77.06%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM PVM QYGKHGGSH HGHRHGRDYHH KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSMAPVMTQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DYESRRN ++ESR EK+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH 251

[Close]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL
Match: A0A6J1CIF4 (Nuclear cap-binding protein subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011242 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.4e-84
Identity = 165/217 (76.04%), Postives = 174/217 (80.18%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTILDDRPIRVDFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGS+ PV+PQYGKHGG H HGHRHGRDY H KRYRDDDHHAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDY-HRKRYRDDDHHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           DYESRRNPDHESR EK+PRFRESGDSDEEDD+ +KQR
Sbjct: 245 DYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR 249

[Close]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL
Match: A0A6J1J7C7 (Nuclear cap-binding protein subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111484127 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 164/218 (75.23%), Postives = 174/218 (79.82%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGSM  V+PQYGKHGGSH +GHRHGRDYH+ KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DY+SRRNPDHESR +K+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYDSRRNPDHESRPQKNPRFRESGDSDEEDDDDRKQRH 251

[Close]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL
Match: A0A6J1FX36 (Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111448282 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.8e-82
Identity = 163/218 (74.77%), Postives = 174/218 (79.82%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWGRGRS
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDPG-------------------------------RGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMPQYGKHGGSHEHGHRHGRDYHHHKRYRDDDHHAHKSFKRTS 180
           QRQLVDYGTGSLGS+  V+PQYGKHGGSH +G RHGRDYH+ KRYRDDD HAH+S KRTS
Sbjct: 185 QRQLVDYGTGSLGSVPSVIPQYGKHGGSHGNGPRHGRDYHNRKRYRDDDRHAHESSKRTS 244

Query: 181 DYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQRH 219
           DY+SRRNPDHESR +K+PRFRESGDSDEEDD+ +KQRH
Sbjct: 245 DYDSRRNPDHESRPQKNPRFRESGDSDEEDDDDRKQRH 251

[Close]

BLAST of CcUC02G026820 vs. TAIR 10
Match: AT5G44200.1 (CAP-binding protein 20 )

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-63
Identity = 134/223 (60.09%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWGRGRS
Sbjct: 65  MGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDP-------------------------------ARGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMP-QYG---KHGGSHEHG--HRHGRDYHHHKRYRDDDHHAHK 180
           QRQLVDYGTGSLG+     P  YG   + GG++  G  +RHGR  +H KR RDDD +   
Sbjct: 185 QRQLVDYGTGSLGAYPQAAPTNYGNGRRGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRD 244

Query: 181 SFKRTSDYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           + +R +D+ESRR+ D + R EK+PRFRESGDSD++ ++ +K+R
Sbjct: 245 NSRRNTDHESRRDTDSDMRPEKNPRFRESGDSDDDGEDDRKRR 256

[Close]

BLAST of CcUC02G026820 vs. TAIR 10
Match: AT5G44200.2 (CAP-binding protein 20 )

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-63
Identity = 134/223 (60.09%), Postives = 158/223 (70.85%), Query Frame = 0


Query: 1   MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 60
           MGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWGRGRS
Sbjct: 65  MGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 61  GGQVRDEYRTDYDPDILFSFNTFTHYIDYGNPQSDALKIKFLLHFFGGGFGKLVQKELEE 120
           GGQVRDEYRTDYDP                                 GG+GKLVQKELE 
Sbjct: 125 GGQVRDEYRTDYDP-------------------------------ARGGYGKLVQKELEA 184

Query: 121 QRQLVDYGTGSLGSMLPVMP-QYG---KHGGSHEHG--HRHGRDYHHHKRYRDDDHHAHK 180
           QRQLVDYGTGSLG+     P  YG   + GG++  G  +RHGR  +H KR RDDD +   
Sbjct: 185 QRQLVDYGTGSLGAYPQAAPTNYGNGRRGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRD 244

Query: 181 SFKRTSDYESRRNPDHESRLEKDPRFRESGDSDEEDDNGQKQR 218
           + +R +D+ESRR+ D + R EK+PRFRESGDSD++ ++ +K+R
Sbjct: 245 NSRRNTDHESRRDTDSDMRPEKNPRFRESGDSDDDGEDDRKRR 256

The following BLAST results are available for this feature:

BLAST of CcUC02G026820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026974.1	2.5e-86	67.53	Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_004137136.1	3.6e-85	77.06	nuclear cap-binding protein subunit 2 [Cucumis sativus] >XP_031739893.1 nuclear ...	[more]
XP_038900343.1	3.6e-85	78.34	nuclear cap-binding protein subunit 2 [Benincasa hispida] >XP_038900344.1 nuclea...	[more]
XP_008464581.1	4.6e-85	77.06	PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]	[more]
XP_022140633.1	2.0e-83	76.04	nuclear cap-binding protein subunit 2 [Momordica charantia]	[more]

BLAST of CcUC02G026820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XFD1	4.4e-62	60.09	Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CBP20 P...	[more]
Q84L14	2.0e-51	55.91	Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B7P877	1.0e-26	72.60	Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis OX=6945 GN=Cbp20 PE=3...	[more]
Q1HE01	3.0e-26	72.60	Nuclear cap-binding protein subunit 2 OS=Bombyx mori OX=7091 PE=2 SV=1	[more]
Q3ZBJ1	5.1e-26	73.97	Nuclear cap-binding protein subunit 2 OS=Bos taurus OX=9913 GN=NCBP2 PE=2 SV=1	[more]

BLAST of CcUC02G026820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX7	4.0e-90	79.82	Nuclear cap-binding protein subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G129020...	[more]
A0A1S3CLT9	2.2e-85	77.06	Nuclear cap-binding protein subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502423 PE...	[more]
A0A6J1CIF4	9.4e-84	76.04	Nuclear cap-binding protein subunit 2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1J7C7	1.2e-83	75.23	Nuclear cap-binding protein subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC11148412...	[more]
A0A6J1FX36	1.8e-82	74.77	Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]

BLAST of CcUC02G026820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44200.1	3.1e-63	60.09	CAP-binding protein 20	[more]
AT5G44200.2	3.1e-63	60.09	CAP-binding protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..76 e-value: 1.2E-18 score: 69.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..218
None	No IPR available	PANTHER	PTHR18847:SF0	NUCLEAR CAP-BINDING PROTEIN SUBUNIT 2	coord: 1..172
IPR027157	Nuclear cap-binding protein subunit 2	PANTHER	PTHR18847	20 KD NUCLEAR CAP BINDING PROTEIN	coord: 1..172
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G026820.1	CcUC02G026820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
cellular_component	GO:0005846	nuclear cap binding complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000339	RNA cap binding
molecular_function	GO:0003676	nucleic acid binding