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CcUC02G026510 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTAAGAAATCCACTCACACCCTTCATTTCTTTCATCCCTAATCTCTCTTAACTTCCCCTAGATTTTGATTTCACCACTTGTTCGTTTCTGGGTTTCAATTCTTTTTTTGATTTATTTCCTTATCCATGTGTTTTTCCTTTGAATATTCGTCTTCCTGTCAAATGGGTGTTGAAAATTTTGAGGGTTTTATGCTGGGTGTGGTTTCTCTTTGCCCTTTTTGCTTGTATCTCAAAGGAGTGAAATGAATCCGGTTGTATTCTGTATCTGTATTTGGTACTATGCTTGATTGCTTTTTGCCCTTTGTGTCTGTTTATGAATGAGTTGGTTACTAGCTTTTAGCCCTTTCTGCATAGTTTTGTTAGTATGCTAATTTTGATGATGGATTGGTGGGGTTTCTTCCTATTTGTTTGGTTTTGAAGTTTCTTCCATTGGGGGAATTTGGGCTTTTCACTCAATCAGCTTTTCTTAAACGTTTGAAGTATGCTGAAGAAAAAGTTGGAGAGTTTTTTTTGGCATTCTATGACAAATATATGTAAATTATATCTAACTTGAGAGCTTCATCCAAACAAACAGACAAACTAGATAGCCCAACATATATCTAATGATTTGGTGTTAAAGATGAGCTCTGGAAGTTTCTTCTGTTTACTATGGTCTGCCAAATGTCCTACAACTAGTTGTTAGTCTCGGTTAAGACTTAAGGATGACCAAGAAACTTGGTAAAATCTCATGTATGGTTGATTCTATGGAGTGCGTTGCATTAAGTTTGGTGAGATTTCTCTATTCTCCCCTGTTTTTACTATTCTCTGCATAAGTTTTTAGAGATGTTTCTGATATTCGATTGGGTAGTTCTGGATTGTTTCGAGATTATCTTAACTTCGGGTTGGCTCTTCATATCTTGGGGTAAGGAAATACTTTTGTTATAAACCTTGAAGGACAGTTGAAGAATTTTCTGTATGTCTGTTTCTGTTTTGGATCAGACAGGCTTTATTGAATTAACTATGGTCTTGCATGAGGTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTCTTTATTATTCTTTTTTTTTGTTATGTTTTCAAATATTTCTATTAATTTTGGTATTTAAAACAATTATCTCATATATATCAGTAAACAACTTATTCATTGTTTACAGGCATTTTCAACTTTATTGTTAATGCATTGTTTATAGATTCTAATTTTACGAAAATTTTGATGAAAATATTAGTAAAATGTTTACTTCGGTGGATACGTATGGAAAAGTAATTAAAAAAAAATTAAATTTAAATTAGTAAATAAACATATTATGATTTTTAAAACGAGTTAATATGTCCATTGTTTATATTATATTTACATTGGTGACTATTTTTTGTGTTNTACTTATTTTGCTGTTATTGCTCAGACTTTTACTTCCCTTGTGCCTCAATCTTTGAACACCTAACTTAATGAGCTACAACTAAGTGGACGTTTGTACTATATTGCCATGAAATGACTGCCATCCTTGAGTTTATTGATTCTGCAGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTGTAAGTTCTCTGCCCAAATACTTCGAATTTCGACTAGTTTTTGAGACTACTCGGTATCGGAAGCTTTGCTTGTTAGACAATTGGCAAATGTGTCTTTTCTAGATACCTCCCTCATGAGCTTCTAACTCCACACTTGTCATATTCTTGCAGTCATTGGATGAAGGCACATTGTGTGATCAATTTAAATGATCAAATTCTCTTTGTTTGGTGCCTAAATTTTACATTGTTGTAAATATACCATGTTGTTTAAACTAATTCCATTCATATGTTACAAGTAATTAAACACTGCTATTTTCTCATGATTTTGAAAGTTGGAATTTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCTGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACCTGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTGTGCATAAATGGCAATTGTTGGAGATTGTTGTTTATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA ATGGCGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCTGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACCTGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTGTGCATAAATGGCAATTGTTGGAGATTGTTGTTTATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA ATGGCGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCTGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACCTGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTGTGCATAAATGGCAATTGTTGGAGATTGTTGTTTATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNEKMVLLLASCRIVKLSLFDKWGSAEMYNLQILNNTSEAVFRTCDGYCWTPFVRTFVNNLGVWLGMKMINHHCLVMLFLVHKWQLLEIVVYHHPSSPSPLVVK Homology
BLAST of CcUC02G026510 vs. NCBI nr
Match: XP_038902743.1 (protein NOI4 [Benincasa hispida]) HSP 1 Score: 121.3 bits (303), Expect = 7.4e-24 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. NCBI nr
Match: XP_022943908.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022985731.1 RPM1-interacting protein 4-like [Cucurbita maxima] >XP_023512852.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 119.4 bits (298), Expect = 2.8e-23 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CcUC02G026510 vs. NCBI nr
Match: KAG6570949.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.4 bits (298), Expect = 2.8e-23 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CcUC02G026510 vs. NCBI nr
Match: XP_022140725.1 (RPM1-interacting protein 4 [Momordica charantia]) HSP 1 Score: 118.2 bits (295), Expect = 6.2e-23 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. NCBI nr
Match: XP_022947539.1 (uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata] >XP_022971144.1 uncharacterized protein LOC111469905 isoform X1 [Cucurbita maxima] >XP_023534543.1 uncharacterized protein LOC111796087 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6604921.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-06 Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy TrEMBL
Match: A0A6J1J928 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111483698 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy TrEMBL
Match: A0A6J1FXH4 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448491 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy TrEMBL
Match: A0A6J1CFY0 (RPM1-interacting protein 4 OS=Momordica charantia OX=3673 GN=LOC111011320 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.0e-23 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy TrEMBL
Match: A0A6J1I7R1 (uncharacterized protein LOC111469905 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469905 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 8.8e-23 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. ExPASy TrEMBL
Match: A0A6J1G736 (uncharacterized protein LOC111451376 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451376 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 8.8e-23 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CcUC02G026510 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19 Identity = 45/61 (73.77%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of CcUC02G026510 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 84.7 bits (208), Expect = 7.1e-17 Identity = 48/77 (62.34%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of CcUC02G026510 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-16 Identity = 45/69 (65.22%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CcUC02G026510 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of CcUC02G026510 vs. TAIR 10
Match: AT4G35655.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 68.2 bits (165), Expect = 6.9e-12 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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