CcUC02G026110 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G026110
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGlutamate receptor
LocationCicolChr02: 11633647 .. 11640449 (-)
RNA-Seq ExpressionCcUC02G026110
SyntenyCcUC02G026110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAACAAAAAAAGAGCTTAGAGAAGCCGATAAGGTGGATCTGGTTAGGGAAGAGGAATAGCAAGGGAACTGGTAAGAAGTATTTGATTTTTTGAAGGTGAGCATTCTATGGTGTCGGACTGTGTATTGACTTGTTTCTAATCAGCATTTTCTTCCTTCTCGTCAAACTCTGGAAATTATTGTACGTTATTGTATGATCAAGACGTGTTATTAAAGAAATTTATAAACCGCCTTCCTAATCCAACCAGAAATTGATTGGTGGAGCAGTCAAATTCATGTTGAAAACATTGCAAATGACCCTCCCACTGTCGCTACGCGATTTTGTAAGTGTTCTTGATCGAATTTCTTTTAAATCCCCTCGGTAAAATTTTGTTTTAGAAGTATATTGATGTCGAGTTTGTAATTCTATGTAATGTCCTGTTTCAGTTTAGCTCAGTGACTGGAGTGTGGTTCGATGGCTCTCGAGGAAAAAAACTCTGTGGTTCAGTGATTCTTAGCTTTGACAAGCAGATCAGTAAGGGGAGAGCAATTTTGTGTTTGTTAGCTGTGAACTTGCAGTTGTTAAGTCTGTTCTGTAACAGTAGTGGTTTGGTAGACACTGTCGGAGAACTGCTCGGAGTTGTAAGCGTTGATCAACAATGATTGATGGGATCATCGGCGCAACCAGCACCACGTTGTTAAACAGCTTTTGGGCGTCAAATCGGATGCGTGCATTAATTGGGAACAGGGTCCTATTTTGGCTTAAAATCCTCTCCGAGTAAATTTCTTTGATCATTCCTGAGCTTTGCTTATGGAAGTCAATCTTTATTCTCTTTTTACGTTCTTGGTTTTGTGTTTGTTTACGGTGACATATTCCTTCAAAAGTAATCCCATGGCTTTGTTTTCTTTTACTGTCAATGGGATTCGAATGATTCCCTCTGATAAGACGTGCCAATCCCCCATGACTTCGTTTTTCTTGCCTTCCTTTGTACTTATTCTTGACCTACATCTTTTCCTGTTCACGGTTTTTTTTCTATTGACGATTTTGTGTCGCTGAAGTAGCAATGGTAAAACTTGAGTTTATTCTTTAGGAGATCTATACAATAATTGGTAGTAAATAGTTCTATAATGAAACTTTTAGGTGGAATGCTTGTTCTTGAGCTCCTTCTCTTCATTTAAAACTTTCCTGGTTATCACCAATCGCTTTTTGCCTGTTCAGCAGTCTCCAGCTCTGTGAAATCTTGAATCAGTTAGTAGACTTCCTGGTCCAGGGCTGGTTTGGCAGATTAAGTTCGTTGTTCACTCATGGAGAGCTTATTAGTTCTTACATTCATTAGTTTGATATGGGCATTTCTTGCTGGTTCTGCATGTTGCCAAAGGCCTGCAGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCAATTATAGGAAGAGTGGCGAAGGTGGCAATGGAAGCTGCAGTTTCGGATGTGAATGCAGATCCTTCCATTCTCAATGGAACAAAGCTGAATTTGGTCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGGTATGTCACTGTACACACATATTTTGTTATGATATGTTCGAAATATTGGGAACATTCTGGAAATGGCTATGGTAGTGTTATCACAATTCTATGTCTTTGATTGTTATTAGGATGAAATTGCATAATTAAATATTACCGTGTCTCGTATGTGAAGGGGGAAATTTGTTACTCCGTCATTCCTGATGCTGTCTGCTATTCCTTCACCATCCTTTCTACCTATATCTTTCAGTGCTCCGATTTTGAATATATGGCTCTGAATTCTTATACTGGACTTTTCTTTTTATATTGAACACACTTTCTGACTTCTCCCGACAGCTTTCCAGGTTCTTGAGAAAGATGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCGTATGCTGCCACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTCTTCCTACGAACTACTCAGAGTGATGCCTACCAAATGACTGCTATGGCAGATTTAATTGACTTTTATGAGTGGAAGGAGGTGATCATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATATCCACTTTAACTGATGAGCTTGACAAAAGGATGTTTAAAATTTCTTACAAAATACCCTTACCTTCTCATTTTAATCTCAGTGAAATCACAGTCATGCTCAATAAATCCAAGTTGCTCGGTCCTCGTGTCTATGTTGTTCATGTCAATCCTGATCCTAGATTAAGTATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTACTACCTTAGATTCTGTTCTGCCTGTGCAACAAACCTCTATAGACATCCTTCAAGGTGTGGTTGTACTTCGTCAACATATTCCTAAATCCAACCGACAAACAACATTATGGTCTCGGTTAAGGAAGATGCTGCCAGAAGGCTCCAGAAATTCTTCGTTGAATGTCTATGCTCTTAGTGCCTATGATACGATTCAAGTAGCTGCACGTGCAATTGATAAGTTTCTAAATGAAGGTAGGAGCATTACCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGCCCTGGGGAAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAGGCAAACTTTACTGGTTTAAGTGGTCAGATTGAGTTTAATTCAGATCGGAACCTTGTCAATAGAGGCTATGAGGTGATCAATATTGATCAGACAGGACTGCGTAGAGTTGGTTATTGGTCCAATGTCACAGGCTTTACAATCCAATCGCCAGAAACTCTGAAGCAGAAACGAACTAGTTATTCCCACCTGAACCAGGCTCTTGGCAATGTTACCTGGCCTGGTGGAAAGACAGAAAGACCGCGTGGATGGGTGATTGCAGACAATGAAAGACCACTAATAATTGGAGTGCCACGTAGAGTAAGTTTCATTGAATTTGTTACTGCAGTCAATGGAAGCCACGAAAACACTGAAGGATTCTGTATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCTTATGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTACTCCAATCCTAGTTATGATGACCTTGTGAAGAGCGTTGCAAATGGTGTAAGTAAAATATTATATTATCTACTTTTCGGATTTCTGAGTGCCTAAAGAGAATAAATCCTATCTGGGATTGTGGTTTTCAGAAAGTGTCAACATGATTTAGTAACTATCTGTAAAGCTCTTGAGGAAGGGTTTACGGATGGTGTAAAGGAATGATTTTATTTGGTTTCTAAGGGGCAGAATATCTGTTGGTTCCATTTGCTTGTAGATTAATTATGTTATCTACGGTGTATTGGCATTTGCAATTAATTAATTAAATTACCATACTTTGTTGTCTAAGATCCTCTAGCAAAAATGATGAATCCATCCAAAATGTTTGGTGCATTTTAATCAATCCTAAAGTAGTGAATTAGATTTGCAAATAGACTGAAAAGAAAATATTGCAGGAAGAACAAAAGTAAATTGTTTTTGTCTATATGCAGTTTGTAACCTACTTTTGAACTGAAGGTGTATTAGTGTGTTCATTAAATTTATTCTCATTTTAGCGTGTGGATTCTATTTATTCTTTCTCTGACAAAAATCAATCGCAGAGCTGTTACTTTCTCATTCCTTTTGTGTCAGATATTTGATGCAGCTGTTGGAGATATTGCAATTGTTACCAATCGAACAAGGATTGTGGATTTTTCTCAGCCTTTTGCTTCTACCGGGCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCAAATGCTTGGGTGTTCCTTAAACCATTTACAACAGAGATGTGGTGCGTAACATCGGCGTCCTTTTTTATGATTGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGGCAGCTAGTGACAGTAATACTGTAAGTGCTCTCAGTGTTGAAGGTGGTTACATATAGATCAATAAGTGGGAAATTTTCAATGACACAGCTATTCTTTGTTACACCATTCCTTTAGAATAAGTTAATCTTTTGCAATAGCTGATTCAGAATAATATCTGAAAATATTTCCATCTTGCAGGTTCAGCTTCTCGACATTGTTCAAAACGAATCGTAAGATATTGTTTTCTTTCTTTTGATTTTTTTTATTTGTTTACTTGTTTTTTTTCCCCTGTAACACGCACTGTCTAAAATAAAAATAAACAGCATGATTTGGTGGGCTTGATGAATGTGGGGCAAGTTTAACTCGAATTCAACTCTTAACTAAGATTATATAAATCATGCTCCAACAGCTTATCATTTAATCCACTTTATTTAAACTGATATGTATGTTATAAAGAAGATCAAATTTATAAATTCAAAATGTTGACAGGCCGTAATATTTTCACTGGAATCTTGTATTTATATTTTTGTTTCAGTTTACCTAAAAAATACTTGCACAGAAGTTATTAACCTGGTTATCAGAACTCCTCTTCATGATACTGTTACTACAATTTATGAATCATGCACTCAAGCTGTCTTATAGGTTGAAAGTACCATACATTGGAGGGTATTGCATTAAGTTGTTTTGATGAAGGTGCATTCTCTAAGAGTTATTTGTTCTGCCTATTCTCTTTTCAAATACATAATAGCTACTGTCCACTTATAGGTAAATTCTGCTGCGAAGCTCATTGTTGAAAATGTCATTTTTTTAATTGCCGGTCCTTTTACTGTTCAAATCATTTTTAAGATATTTCCATATCATAGCCCATGATTTCAGATGACTGCATGAGCTACTCAAATTACAAATTTTAATTGTACTATATAGTTGACAAGATTTCTGACTTCACAACTCAAATTACAGAGGAAGCTACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACGTCAAGCTATACAGCCAGTCTCACTTCAATCCTTACAGTTCAGCAGCTTTCATCTCCCATTAAAGGACTTGATGACTTGATTACTAATGAACAGCCCATTGGCTACCAGGTAGGATCATTTGCGTATAGCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTTGTATCTCTAGGCTCTCCAGAAGAGTATGAGTCAGCACTGCTAAAGGGGCCATTCAAAAAAGGAGGGGTGGCGGCTATTGTAGATGAACTTCCATATATGGAATTGTTCTTATCAGGGAGGAATGATTTCGGAATGATTGGACAGCCATTCACCAAGAGTGGATGGGGATTTGTGAGTATCTGTCAACATGTCGATATATCCGTAAATGGAAGAGTTTGATGTCCATGTTAGATATCTATTGATATTTCCAACATTGTTTATAAATGTTCATAAAACATAGAAAATGTCATCTATTTAGTTCAATATGAATAGAAATACTAATAATAATATTTATAACTTAGTTTGACAGTAAAAACAACTTAATTATTAATCTAAATAAATTTTATAAATTTCTGACTTACAAAAATATTTGACGATATCAATATTTTATTGATATATCTGTAAAATTGAAATCTTGATATCGATATCAATATTTTATCGGTAATTGTGCACATATTTTTCTAGTTGCATTGTTTTGTAGTCTGTTTGGATGGAAACTTGGGGGAAAACCAAAAATATTATAACTTCATTGCATGGAGGATGTTATGGCATTTATCATTTGTTTATGTTAGCTCACTGGGGTGTGAATGCCAGTGATAAAATCAGTTATCAGTACTGTTAGTTCTTCATGTGGTTTTCTTATTAGTCATGACATAACTTTAAAAACTGTAGTTCTATTGGATTTAAACTAGTGCCGTTTATGGTATCTTGTGTTACCTTTTCCATGGAATTGTTGCACTCCACTAATGCTACGCTTTTTCAACCAGGCTTTTCAGCGAGGATCTCCACTTGCGGTAGACATGTCAACTGCAATTCTAAAGCTTTCTGAGAATGGAAAGCTTCAGAAGATCCACGAGAAGTGGTTTTGTAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAGTCTGAGCCTAACCAGCTTCGATTGGTCAGCTTCTGGGGTCTGTATCTCTTGTGCGGTGCCTTTTCACTTGTTGCTCTTCTTATATTTTTGCTCCGCATAGTTCGACAATTTGCTCGTTACATACGACAACAGAAGGAATCTTCTCATGCAGAATTGGTGTCATCAAATTCCAACTCAAGCTGGACTCAGGTTATATATAAGTTTATTGACTTTGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTTCGAAAGTATGATAATCAGAATCAGGCTAGCCAATAGCTCTTTGATGTGTGCTGAAAATGCTTCAAGGTAAATCCTGCAGTTGGAATCTCTATGCTTTAAAAAATGTGTTCTTCCTTTGCTGCAGAGTAACCTAAAACTTAGTGTTCATGTAAATAAGACTGCAACGTTATGATCCTAATTACTCCCATATTTGGGTGGTCAAATTCTGTATGATGGGACAAGTATGATATTTATGGGTGCTACAAGTTATTCTGTATGAAGTAGCAATTTTTTGTTTTTTGTCATTTTGATAAAGTCGAGCTAGGTTGTAAGACTTGGTAGATTTATCTCTCCCCTGATTTTAGGATTATTAGAACTATGATATGGATGTGAAATATTTCCTTTTCAAATTGTTGCGTTCTATGAG

mRNA sequence

AAAAAAAAAAACAAAAAAAGAGCTTAGAGAAGCCGATAAGGTGGATCTGGTTAGGGAAGAGGAATAGCAAGGGAACTGGTAAGAAGTATTTGATTTTTTGAAGAAATTGATTGGTGGAGCAGTCAAATTCATGTTGAAAACATTGCAAATGACCCTCCCACTGTCGCTACGCGATTTTTTTAGCTCAGTGACTGGAGTGTGGTTCGATGGCTCTCGAGGAAAAAAACTCTGTGGTTCAGTGATTCTTAGCTTTGACAAGCAGATCAGTAAGGGGAGAGCAATTTTGTGTTTGTTAGCTGTGAACTTGCAGTTGTTAAGTCTGTTCTGTAACAGTAGTGGTTTGGTAGACACTGTCGGAGAACTGCTCGGAGTTGTAAGCGTTGATCAACAATGATTGATGGGATCATCGGCGCAACCAGCACCACGTTGTTAAACAGCTTTTGGGCGTCAAATCGGATGCGTGCATTAATTGGGAACAGGGTCCTATTTTGGCTTAAAATCCTCTCCGATCTCCAGCTCTGTGAAATCTTGAATCAGTTAGTAGACTTCCTGGTCCAGGGCTGGTTTGGCAGATTAAGTTCGTTGTTCACTCATGGAGAGCTTATTAGTTCTTACATTCATTAGTTTGATATGGGCATTTCTTGCTGGTTCTGCATGTTGCCAAAGGCCTGCAGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCAATTATAGGAAGAGTGGCGAAGGTGGCAATGGAAGCTGCAGTTTCGGATGTGAATGCAGATCCTTCCATTCTCAATGGAACAAAGCTGAATTTGGTCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGCTTTCCAGGTTCTTGAGAAAGATGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCGTATGCTGCCACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTCTTCCTACGAACTACTCAGAGTGATGCCTACCAAATGACTGCTATGGCAGATTTAATTGACTTTTATGAGTGGAAGGAGGTGATCATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATATCCACTTTAACTGATGAGCTTGACAAAAGGATGTTTAAAATTTCTTACAAAATACCCTTACCTTCTCATTTTAATCTCAGTGAAATCACAGTCATGCTCAATAAATCCAAGTTGCTCGGTCCTCGTGTCTATGTTGTTCATGTCAATCCTGATCCTAGATTAAGTATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTACTACCTTAGATTCTGTTCTGCCTGTGCAACAAACCTCTATAGACATCCTTCAAGGTGTGGTTGTACTTCGTCAACATATTCCTAAATCCAACCGACAAACAACATTATGGTCTCGGTTAAGGAAGATGCTGCCAGAAGGCTCCAGAAATTCTTCGTTGAATGTCTATGCTCTTAGTGCCTATGATACGATTCAAGTAGCTGCACGTGCAATTGATAAGTTTCTAAATGAAGGTAGGAGCATTACCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGCCCTGGGGAAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAGGCAAACTTTACTGGTTTAAGTGGTCAGATTGAGTTTAATTCAGATCGGAACCTTGTCAATAGAGGCTATGAGGTGATCAATATTGATCAGACAGGACTGCGTAGAGTTGGTTATTGGTCCAATGTCACAGGCTTTACAATCCAATCGCCAGAAACTCTGAAGCAGAAACGAACTAGTTATTCCCACCTGAACCAGGCTCTTGGCAATGTTACCTGGCCTGGTGGAAAGACAGAAAGACCGCGTGGATGGGTGATTGCAGACAATGAAAGACCACTAATAATTGGAGTGCCACGTAGAGTAAGTTTCATTGAATTTGTTACTGCAGTCAATGGAAGCCACGAAAACACTGAAGGATTCTGTATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCTTATGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTACTCCAATCCTAGTTATGATGACCTTGTGAAGAGCGTTGCAAATGGTATATTTGATGCAGCTGTTGGAGATATTGCAATTGTTACCAATCGAACAAGGATTGTGGATTTTTCTCAGCCTTTTGCTTCTACCGGGCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCAAATGCTTGGGTGTTCCTTAAACCATTTACAACAGAGATGTGGTGCGTAACATCGGCGTCCTTTTTTATGATTGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGGCAGCTAGTGACAGTAATACTGTTCAGCTTCTCGACATTGTTCAAAACGAATCAGGAAGCTACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACGTCAAGCTATACAGCCAGTCTCACTTCAATCCTTACAGTTCAGCAGCTTTCATCTCCCATTAAAGGACTTGATGACTTGATTACTAATGAACAGCCCATTGGCTACCAGGTAGGATCATTTGCGTATAGCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTTGTATCTCTAGGCTCTCCAGAAGAGTATGAGTCAGCACTGCTAAAGGGGCCATTCAAAAAAGGAGGGGTGGCGGCTATTGTAGATGAACTTCCATATATGGAATTGTTCTTATCAGGGAGGAATGATTTCGGAATGATTGGACAGCCATTCACCAAGAGTGGATGGGGATTTGCTTTTCAGCGAGGATCTCCACTTGCGGTAGACATGTCAACTGCAATTCTAAAGCTTTCTGAGAATGGAAAGCTTCAGAAGATCCACGAGAAGTGGTTTTGTAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAGTCTGAGCCTAACCAGCTTCGATTGGTCAGCTTCTGGGGTCTGTATCTCTTGTGCGGTGCCTTTTCACTTGTTGCTCTTCTTATATTTTTGCTCCGCATAGTTCGACAATTTGCTCGTTACATACGACAACAGAAGGAATCTTCTCATGCAGAATTGGTGTCATCAAATTCCAACTCAAGCTGGACTCAGGTTATATATAAGTTTATTGACTTTGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTTCGAAAGTATGATAATCAGAATCAGGCTAGCCAATAGCTCTTTGATGTGTGCTGAAAATGCTTCAAGGTAAATCCTGCAGTTGGAATCTCTATGCTTTAAAAAATGTGTTCTTCCTTTGCTGCAGAGTAACCTAAAACTTAGTGTTCATGTAAATAAGACTGCAACGTTATGATCCTAATTACTCCCATATTTGGGTGGTCAAATTCTGTATGATGGGACAAGTATGATATTTATGGGTGCTACAAGTTATTCTGTATGAAGTAGCAATTTTTTGTTTTTTGTCATTTTGATAAAGTCGAGCTAGGTTGTAAGACTTGGTAGATTTATCTCTCCCCTGATTTTAGGATTATTAGAACTATGATATGGATGTGAAATATTTCCTTTTCAAATTGTTGCGTTCTATGAG

Coding sequence (CDS)

ATGTTGAAAACATTGCAAATGACCCTCCCACTGTCGCTACGCGATTTTTTTAGCTCAGTGACTGGAGTGTGGTTCGATGGCTCTCGAGGAAAAAAACTCTGTGGTTCAGTGATTCTTAGCTTTGACAAGCAGATCAGTAAGGGGAGAGCAATTTTGTGTTTGTTAGCTGTGAACTTGCAGTTGTTAAGTCTGTTCTGTAACAGTAGTGGTTTGGTAGACACTGTCGGAGAACTGCTCGGAGTTGTAAGCGTTGATCAACAATGA

Protein sequence

MLKTLQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQISKGRAILCLLAVNLQLLSLFCNSSGLVDTVGELLGVVSVDQQ
Homology
[Close]
BLAST of CcUC02G026110 vs. NCBI nr
Match: KAG7034970.1 (hypothetical protein SDJN02_01763, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 2   LKTLQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQISKGRAILCLLAVNLQL 61
           LKT+QM LP      F SV GVWFDGSRGKK CGSVIL FD+Q+ KGR ILCL +VNL+L
Sbjct: 27  LKTMQMVLPPMK---FDSVNGVWFDGSRGKKPCGSVILCFDEQMRKGREILCLFSVNLRL 86

Query: 62  LSLFCNSSGLVDTVGELLGVVSVD 86
            SLFCNS   VD V ELLGVVS+D
Sbjct: 87  FSLFCNSGDSVDFVDELLGVVSID 107

[Close]
BLAST of CcUC02G026110 vs. NCBI nr
Match: KAG7010730.1 (hypothetical protein SDJN02_27526, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-08
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 2   LKTLQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQIS 47
           L+T++M LPLSLRD F+SVT VWF+GSRGKKL GS IL FDK+IS
Sbjct: 94  LETMRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS 138

[Close]
BLAST of CcUC02G026110 vs. NCBI nr
Match: KAA0043456.1 (glutamate receptor 3.7-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 7.7e-07
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0 

Query: 5  LQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQISKGRAILCLLAVNLQLLSL 64
          +QM LPLSLRD F+SVTGVWF    GK+  GS ILSFDKQISKG ++    ++N  L + 
Sbjct: 1  MQMILPLSLRDSFNSVTGVWF---HGKEFWGSAILSFDKQISKGSSLQLCESLNHSLWAF 60

Query: 65 FCNSS 70
             S+
Sbjct: 61 LAGSA 62

[Close]
BLAST of CcUC02G026110 vs. NCBI nr
Match: KAE8652291.1 (hypothetical protein Csa_021898 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 7  MTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQIS 47
          M LPLSLRD F+SVTGVWFD   G++  GS ILSFDKQIS
Sbjct: 1  MILPLSLRDSFNSVTGVWFD---GEEFWGSAILSFDKQIS 37

[Close]
BLAST of CcUC02G026110 vs. NCBI nr
Match: TYK24226.1 (glutamate receptor 3.7-like [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 5  LQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQI 46
          +QM LPLSLRD F+SVTGVWF    GK+  GS ILSFDKQI
Sbjct: 1  MQMILPLSLRDSFNSVTGVWF---HGKEFWGSAILSFDKQI 38

[Close]
BLAST of CcUC02G026110 vs. ExPASy TrEMBL
Match: A0A5A7TN37 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00740 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0 

Query: 5  LQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQISKGRAILCLLAVNLQLLSL 64
          +QM LPLSLRD F+SVTGVWF    GK+  GS ILSFDKQISKG ++    ++N  L + 
Sbjct: 1  MQMILPLSLRDSFNSVTGVWF---HGKEFWGSAILSFDKQISKGSSLQLCESLNHSLWAF 60

Query: 65 FCNSS 70
             S+
Sbjct: 61 LAGSA 62

[Close]
BLAST of CcUC02G026110 vs. ExPASy TrEMBL
Match: A0A5D3DKR7 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00320 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.8e-05
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 5  LQMTLPLSLRDFFSSVTGVWFDGSRGKKLCGSVILSFDKQI 46
          +QM LPLSLRD F+SVTGVWF    GK+  GS ILSFDKQI
Sbjct: 1  MQMILPLSLRDSFNSVTGVWF---HGKEFWGSAILSFDKQI 38

The following BLAST results are available for this feature:
BLAST of CcUC02G026110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034970.12.7e-2069.05hypothetical protein SDJN02_01763, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7010730.12.4e-0873.33hypothetical protein SDJN02_27526, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0043456.17.7e-0753.85glutamate receptor 3.7-like [Cucumis melo var. makuwa][more]
KAE8652291.11.6e-0472.50hypothetical protein Csa_021898 [Cucumis sativus][more]
TYK24226.11.6e-0470.73glutamate receptor 3.7-like [Cucumis melo var. makuwa][more]
BLAST of CcUC02G026110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC02G026110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TN373.7e-0753.85Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G... [more]
A0A5D3DKR77.8e-0570.73Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00... [more]
BLAST of CcUC02G026110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G026110.1CcUC02G026110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
cellular_component GO:0016020 membrane