
CcUC02G025880 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTGTTAGTCCTGATATTAACTCTCTCCAATCCCATGCCTTACATCGATGCTAAGCAAGTGACTATCGATAATGGTAACTCTGTCCCTATCTCTCATGTTGGGTCTGCCTCTTTGTCATCTAATTTATCTATTCCTCTGAAATTTGTTTCATGTCTTATATACTCCAAACATCTCTCATAAATTGATTAGCATTTCAAAATTATGTCGAGATAATATGGCTTCTGTTGAATTCTACTTTCTTTGTTGTGAAGGACCTATTCTCCAAGAAGGCACTCCTTCAGGGTCTTCTTGATGGTGGATTGTACAAGCTCCCGTTGCGGCCCTCCTCAACATATTCGAACCGTTCAAGCTTGCCATCATTTGCTCTCCTCATCAAAATCACTTCTAATTTATGGCATTTTCGTTTAGGTCATCCTGCGTTTCCTATTGTTAGACAAATTTTGAACATTTGTAACATTGATTTTAGGTCCTAA ATCCTGTTAGTCCTGATATTAACTCTCTCCAATCCCATGCCTTACATCGATGCTAAGCAAGTGACTATCGATAATGGACCTATTCTCCAAGAAGGCACTCCTTCAGGGTCTTCTTGATGGTGGATTGTACAAGCTCCCGTTGCGGCCCTCCTCAACATATTCGAACCGTTCAAGCTTGCCATCATTTGCTCTCCTCATCAAAATCACTTCTAATTTATGGCATTTTCGTTTAGGTCATCCTGCGTTTCCTATTGTTAGACAAATTTTGAACATTTGTAACATTGATTTTAGGTCCTAA ATGGACCTATTCTCCAAGAAGGCACTCCTTCAGGGTCTTCTTGATGGTGGATTGTACAAGCTCCCGTTGCGGCCCTCCTCAACATATTCGAACCGTTCAAGCTTGCCATCATTTGCTCTCCTCATCAAAATCACTTCTAATTTATGGCATTTTCGTTTAGGTCATCCTGCGTTTCCTATTGTTAGACAAATTTTGAACATTTGTAACATTGATTTTAGGTCCTAA MDLFSKKALLQGLLDGGLYKLPLRPSSTYSNRSSLPSFALLIKITSNLWHFRLGHPAFPIVRQILNICNIDFRS Homology
BLAST of CcUC02G025880 vs. NCBI nr
Match: RVW65725.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. NCBI nr
Match: CAN61322.1 (hypothetical protein VITISV_012106 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. NCBI nr
Match: RVW95765.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. NCBI nr
Match: RVX22902.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. NCBI nr
Match: RVW36350.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. ExPASy TrEMBL
Match: A0A438G0Q9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1916 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. ExPASy TrEMBL
Match: A0A438CVN7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_547 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. ExPASy TrEMBL
Match: A5BFR8 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_012106 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. ExPASy TrEMBL
Match: A0A438DLM0 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2184 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of CcUC02G025880 vs. ExPASy TrEMBL
Match: A0A438IG92 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1726 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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