![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G025290 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGTAAATAGGACCATTGGGCTTGGATCATTGATTGTGTCTCACCTCAAAAGTTGGAGTTGGTGGTGCTGCTTGTGTGGAAGACTTGGGAAGCTAGAAATAATATGTTATTTTTCGAAAGATTCCAATTGATAGAGACAATATTAGTGCATCTATTGAGAGGTGTATCCATGAAGAGCAAATTTCTAATGTGGTGTCTACTGATAAAGTTGTCGAGAGAAACCACTTGACTCATCCTCTTCCTTCTTCAACTGGCTAATATTGACCTTTGAGAAATTAGTGGAAGGTGAACATTGCAGTTGCTTGAAGCCCTGACCGACGTTCAGATGACCTAGAATGGGTGCTTCGAGACCACCTGGGTCATGTTTGTCTTGCTGGCCTCAAGTTCATCAAAAAATGTAATGAAGTCAATGTTCTTTATGTAATGAGTATGTGTGAAGACCTTCTTAACATCATCTCTCCCAATGTTTGTCTTGTTATTGTCAAATTAGATTGTTTAGAAGTTGTTAACCTTTTATCTGGCAATTGTAAGGATCTAACAGAAGTCTCCTTTTTCATCCACGAGGTTAAGACTTATGCACAAGAATGGAGCAATGTTTCTTTTCATGTTCGTCGTTGGAATAATATTATGGCCCACTCTTTGGCTTCTAAGATGTTGGAAGAGCAAGCTTCTTCCCTTCTTTTTTTCTCCTTACCCTGAGTGGTTTGAGTCTCTTGTTTCTCTTAAAGTAATTCTGTAGTTTGCTTGTTGATATTTGTTTCTTAAAAAGAAAATAAGGGATAAAGTGATAATTTTTCGTCAACTAATTTAAATATAACTCAAGTGATCATTAAAATATATGTTAACTAGTTAAAACTTTAAATTCTTACATTAGAATTGTGTTGAATTAAAAAAAAAAAAAACTAAAAATGAAATAAATAAATAAAATGCACATGTTCCTTAAAATCAACAAAGACCTAAAATAACTCTCTTCGTCAGTCCATTTTGATCTCATTAGATGTCATTATGAGAAAAGACATAGAACTTCAAAATGGTTCGTTTTGATTACAAACAAAATACACATTTCCTGTGAATTTCAACTTCAAATTTTTCATCTATTATCATCTTCTTTGTGAATACTTCAAAAAATTGTGCGAAAAGCTAGGAAGGAAAATTTTAAGTTCTAAATCAGCTAAGGATTTTCAAGCGCCAGAGCCTTAGAACTATAATCCAGCTGAAGCCGTAAATTCCAATTCAGGGGATCGCCAAGTTTCTTGAGAAGTGACTCAGCGATGAATTTATAGGCTGCTTCAGTCGGATGAATGCTATCCCAAAACATAAATTTTGAAGAGTCTTCACACGTTGGGATTATTGCATTACACAGAGGCCCTGCTTCCACCAATCCAATTCCGCAGCAACCTGTGGTCGTGTGCTCAAAACCTGTTCGATGAAATGCCCCAAAGAAAATTTTAGGTGAAAATGGTTTTCAGAACTTGATTTCTCTCAAATATTTACTGCATTGGAGTCAATAAGTAGATGGGGTTTTTCAATTTTGAGTGGTAGGCCACTGACTTACCATATTTTTGAGGATTGTTTACCATGTCGATGAGGGGGGTGTAAATGTCTGCATACAAAATTGTGCTTCCAGAGAGCTGTGGCTGTAAATTGCTCAGCAGCTTTGAAAGCTTCTGATTATAGGCTTTGGAATCTGAGTTTTGATCTTCTAAACAACTTCGATTTAGGGGATTTTCAAAGGCTATGGTCTCTTGAATGGGAAGACAACCAACAGGTGGGAGGCCCGCAACCACTATATTTCGGCATCCAAGTTGGTAAATTTCCTGTTAAACAGAGTTAAAGTGTTATCTTCACTTGGTTCAGGTGTAAGCAAATAGTTATAGGATTAGAATTTAGAGGCTTATTAGAGTATTTTTAAAGTAACCTTTTTAAAAATAGGAGTATGGTTAATGGCCTACTACTTTCTTTTAAAGTACAGGGATAAACTGAATATGGAAAGTTATAATTTAACCTTTGGATTCTTATGTCCAATATTCATAATTTACCTTGATCAAGCTTTGTAGCCTATTCTGTAGAAAATCTTGATAGCCACTAATATTGTACTGCAACTGCCTCGTGGGAAGGTCATAGAAATTAATGTTTATGTCATTGGTTCCTGCGCTAATAACAACCAAAGCACTACCAATAATCCTCCTACTTTCATCCACACCCACAATCCTTTGAAGCCTTTGAATGTAGTTCTTGAAAAGATCAATTTGCTTCATCACAGGAATGACTTTAGATATAGCAGCAGTTAGATCATCGAATCCTGTGCCAGCCGATGCAAAACTCACCCCTGTTTTTATGTCATCGTCTGATAATATTGGATCCAAAAATGGAGGAACAAGCTCTTTTATCCCTAGTTTAGAAGCTACCATGTCAGGAATGAGTTTCCCATCACTGAACCTTCCAGTAGCAACATGGCCAGGAAAATTTTTGCCATATGGAAAATAA ATGTCAGAGTCTTCACACGTTGGGATTATTGCATTACACAGAGGCCCTGCTTCCACCAATCCAATTCCGCAGCAACCTGTGGTCGTGTGCTCAAAACCTAGAGCTGTGGCTGTAAATTGCTCAGCAGCTTTGAAAGCTTCTGATTATAGGCTTTGGAATCTGAGTTTTGATCTTCTAAACAACTTCGATTTAGGGGATTTTCAAAGGCTATGGTCTCTTGAATGGGAAGACAACCAACAGGTGGGAGGCCCGCAACCACTATATTTCGGCATCCAAGTTGGAATGACTTTAGATATAGCAGCAGTTAGATCATCGAATCCTGTGCCAGCCGATGCAAAACTCACCCCTGTTTTTATGTCATCGTCTGATAATATTGGATCCAAAAATGGAGGAACAAGCTCTTTTATCCCTAGTTTAGAAGCTACCATGTCAGGAATGAGTTTCCCATCACTGAACCTTCCAGTAGCAACATGGCCAGGAAAATTTTTGCCATATGGAAAATAA ATGTCAGAGTCTTCACACGTTGGGATTATTGCATTACACAGAGGCCCTGCTTCCACCAATCCAATTCCGCAGCAACCTGTGGTCGTGTGCTCAAAACCTAGAGCTGTGGCTGTAAATTGCTCAGCAGCTTTGAAAGCTTCTGATTATAGGCTTTGGAATCTGAGTTTTGATCTTCTAAACAACTTCGATTTAGGGGATTTTCAAAGGCTATGGTCTCTTGAATGGGAAGACAACCAACAGGTGGGAGGCCCGCAACCACTATATTTCGGCATCCAAGTTGGAATGACTTTAGATATAGCAGCAGTTAGATCATCGAATCCTGTGCCAGCCGATGCAAAACTCACCCCTGTTTTTATGTCATCGTCTGATAATATTGGATCCAAAAATGGAGGAACAAGCTCTTTTATCCCTAGTTTAGAAGCTACCATGTCAGGAATGAGTTTCCCATCACTGAACCTTCCAGTAGCAACATGGCCAGGAAAATTTTTGCCATATGGAAAATAA MSESSHVGIIALHRGPASTNPIPQQPVVVCSKPRAVAVNCSAALKASDYRLWNLSFDLLNNFDLGDFQRLWSLEWEDNQQVGGPQPLYFGIQVGMTLDIAAVRSSNPVPADAKLTPVFMSSSDNIGSKNGGTSSFIPSLEATMSGMSFPSLNLPVATWPGKFLPYGK Homology
BLAST of CcUC02G025290 vs. NCBI nr
Match: THG20953.1 (hypothetical protein TEA_006628 [Camellia sinensis var. sinensis]) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-08 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CcUC02G025290 vs. NCBI nr
Match: PLY84773.1 (hypothetical protein LSAT_5X110740 [Lactuca sativa]) HSP 1 Score: 62.0 bits (149), Expect = 5.6e-06 Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of CcUC02G025290 vs. ExPASy TrEMBL
Match: A0A4S4EVH4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006628 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.9e-09 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CcUC02G025290 vs. ExPASy TrEMBL
Match: A0A0E0N4E7 (Exocyst subunit Exo70 family protein OS=Oryza rufipogon OX=4529 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 39/72 (54.17%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CcUC02G025290 vs. ExPASy TrEMBL
Match: A0A0D3EVR7 (Exocyst subunit Exo70 family protein OS=Oryza barthii OX=65489 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 39/72 (54.17%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CcUC02G025290 vs. ExPASy TrEMBL
Match: A0A0D3EVR9 (Exocyst subunit Exo70 family protein OS=Oryza barthii OX=65489 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 39/72 (54.17%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CcUC02G025290 vs. ExPASy TrEMBL
Match: A0A0E0N4F1 (Exocyst subunit Exo70 family protein OS=Oryza rufipogon OX=4529 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.5e-08 Identity = 39/72 (54.17%), Postives = 42/72 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|