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CcUC02G025080 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAACCAAACAAATTTTGAAGTAGGAATTAAATTAGTATTTTAACCTTATTTATTTGTGGGGGTGGGGGGAAAAAGTTGCATCCAGAGTTTTTACTCTAAGCTCCCCCTGACCGTAGCTCTTCTGCGCGCTCTCTCTCTCTCATCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGTATCCAGTAATTTCTCGCTAATCCCCCCTTTCGAAATTTACTTCTTCTACGCCTATGTTTGAGTTGATTTCTGCAGATTCTGTATTCTAGCTTACAAGTCGTTGTTCTTTCTAACTTTACCTGATAACTGATTTGGAGCTTGGGTCTGAAGGCTCCCAATTAATGTGTTGTTATTGTTTTTGTTGTTTTATTAAATCGATTGTTTTTATGTATAAATTAATTCGTGTTATTTGAAGAGAAGAGAAAGAAGTTTGTTTTCCAGTGGTATTGATGGAAGCTAAACCTTTTGGTGCTCATTTTTCATCGAAGCAAATATATATAAATTTTACGAACATTTTATTATTCACTAGCTATCGCGCCCTCCCATCCCTGGTTAGACCATGTCTTATCTTCTTCTTGTTCTGTGAGTTTTATATGTACATGAAGGTTATCAGAGAACATGTCTTTCAACCTTAAGAAATATTAACTTTTCGTTGATATTTGAGAAGTTACAAGCTATCGACTTCCTAAAGAATGTACAAAAGTAGAAAAGAGAACTCCTCCAGGTTGCATTTATGCTGCTTGCAGGCAAAAAGAGAAGAGCTGTCGTGAATAACAAGCTAGTGAATCCCCTTAAACAGATGGAAGGTTCTATGACTGTTGATGTTGATTTATAATGGCTTTCATATCTCTCAATTACTATTATAACTATTTACAAAAAAACCATTTTTATTAAGATACACGTCATGGAGTAGACAATCCCAGGCAAAAAGGAACTATGACTACCACAAGATTTTCTAATTATTAAGAACCAAAACTAAAGGATAATTACAAACTAAATAGTGGGACACTTAGAGTTTTTGAAATTAGCCAATCCTCAAACTTCCTCACAAGAATCATTGACTTTTTAAGAATCCTCCAATCTCTTTCAAACCAAAATCAAATGTACCCCAAAATAGCCAGATAAGCTGCTTGCCTCAGAATTTCCCCTTTACCACCAATGCAGGCGCAACTACTTTTCGAACCAATCTAACACCAAATTTTGAGATTTATATTTATAGAGATCTTGCCCCGAATTGTTTGCAGAGAGCTTGCTTTCAAGCTTGAACTGGTGTGTTTTGTGTAGGTATGGTTGTATGGGAAAAAGGTTGAAGCTTTGGTTCGGGGTCTGCCCTTTTTCTTAATGAGTTTGCAACCATTTTTGGAATAGTTTTGGATTGTTTGTTGTTTGAGGTTTAGCACCCATGACACAATGGATGAAGTTGTTCAGGTTGGAAATGGGGCTCTTCGCATTAGTTTATTTGGCTAGAAAGGAACAATAGAAGAATGTTTGTGCAGTTAAATGGATGGTGGGATGATATTTAGGATTTGATGTATGCTATTTTTTGGGCTCTTAACTCAAATTTAGGAACTGGTTCATGGTTATCCCTTTTTTTCCTTTGTTACCAACAGTTGGAGTTCTTTGTTGTAAATTTTCTTTAACTTCCACTTTGGTTTGGCCTCTCCAGTTAGCGTTAATGTTTTCCTTCATTTCTGTCAATAAAAATTGAGTTTTCTAGTTCAATTTCATGACTGTAGGCCACCATATAACAAGTGCAAACTTCTGAAATATTAGGAATTTCATGCATTGGTGAAGTAAACTTATTGGATTGGACATTAAGATGGTACTTGTTCATTTGAGTTGTTGAAAACTGTCACAAGCCTCCTTCTCTAATTCTGGTAAAGTTGTTTTTGAAGCTCTTGCCTATTGTTATCCTGGGTCTTTGAGTCATTATCCTTTCTCTATGTTAACATGCTTACGGCAGCACTGTCGAGGTCAGGGGCCGGATTATATACTGCTGCAGAAGCGGAATCGGGTTTCAAGGTAAGGATAGCGTGATTGGTTGATTGGTTGGAAGGTAAGGATAGCATGATTGACAGGTTGCGGGTCCCTTGGATCATGGGGCACCGCTGTCAGCCCGAGGAATGGTATGAATCGGCTTTTTCTAGCCGGGATATCCTCTCTCCGGCTGGGCGAGCGAGTTTCATACCCTACACGATGTAGGAGAGCGGGTTAGCGGGAGCCGCACGTGCGAGTTCCTCCGCATACGGCTCAAGTGGCGAAGGCCCTTTCCTTCGCGCTTGGTAAGCGCTCGCTTTAGCCAAGCTTACTGCTAGCCTATCGGCGTCAGCCAAGCTTCGACGGCGACTGCTCGTCGCTTCTGGCCACCGTGTTTGTATAGAGTGATAGATATTGCTTAATTTGGGTGCCTTGTCAATTTTGTGAGCAACACCCCAGTCGGTATTTCTCAAGAAATTAAGCTATCAAATATGAATTGCACCACCTTAAGCCTTTGGCTAAGGAATAGTCAGTTTTGGCACCTCCAATGCAATTATAGTTCTTCTTGATGCATAGGAGCAGGACTATGCCAAGTAAATATTTAATTGATCCATTTGCTACTTGAACTCCATGTTTACAATGTTAAGATAGTTTCCCAACATCTTAACAATATTCTTAAATACATGGTCTATTTGTTGATTTTAATTGGTTTCATGTCCAGTATTGCAAGGTTGTAACCTCGTGAAATAAAAGTTGATGAATATTGATAGATTGTCCATTATATCATTTCTCGTGTTTTGTCTAATCGTTTAAAGCGTATTCTTCCATCCACCATAAAAATCAACTAGCTTTCGTTGCCAATAGAAAAATGTTGGATGCCTCCTCAATAGCGAATGAACTAATTGATTGATGATTGGACTTTCTCTAGGAGGGAAGGAGTGGTTCTCAAACTAGACCTAGGATAGGCTTTTGATATTGTTGATTAGGGCTTTTGGATGCCCTTCTTCAGGCTAAGGGCTTTGGTACTCTCTGGCAATCTAGGTAAAAGGTTGTATAGCTAGTGCCAACCAAGGTTTGAAATATTGATGTTGATGGAAATATCAAGGTCCCAATTTTATAGAAATATCAATGCAAATTTCAAGAAACTCTATGAAAATTGATGAAAATTGTTATAATTAGTTAATGAAGCTTTCGTTGGGGCTTATTTAGACTATAATTGACCATTTTTAATAATCACTTCTATAAAGCAAGACAACATTTAGATTTATTGTAGATGTATGTGTAGTTGTCGATGCAAGAGCAGAAATGGAAAAATAATTACAAAATAATATAAATTTTAGGAATATTTTGAGGTGAAATGATGTGAAAAAGAAAGATTTGGATGGTAAAAGAAAAAAAAAAACTCACATCAAGTCAATTTTGAGGTGAAATGATGTGAATATTTAATGAAAAAGTTGAATGAGGTTAAAAATAAAAATAGTGGTTTTTCCGAATTCAATTTCTTTAGAAATGAAAGTTTTGAATTGAAATTAAACTGAAAATTGAGAAAAGTTGGAAATTAGAAAAAGTAACCATTGGAAAAGCTTCATCTTTAGTTAGAAATGATAGTGGTGTGTAAAACTATACAATTCTGAGTAATCAAGACTATAAAATTGAAAAACTTGAACTAACGTAGCTAATTTCAAAAGAGATCAATATTTTCTCAAAATTTTGAAATCTTGAAATCTTTTCAAGGCATCAATGGAAATTTTCCACCGTGGTGCCAACAGCTCTATCATCATAAATGGTAGGCCTCTAGGGAAGATCTATCCATCTCCTGAAATTAGACAAGGTGACCCCTCTCACCTTTCTTATTTATTTTGGTTTATGATTGCTTTAGTCACCTTTTGGACCATAGTGCCCATTTGGATACTATTGGGAGGGGACCCATCCAATTGGTACATCCTCTTTCTATTTGAACTACTTACAATTTGTTTATGACACCCTTTTGTTTTCGACTGTGGATGGGATTGTTTTAGTACGTCTTTTTGAGATTGTTAATATTTTTGAGAGGGCATTTGGTTTGAAAATCAATCTAAGAGTGCATTGCTTGGGTTTCATATTGTTGACTCTAAGATGAAACGGATGTTGTCTACGTTTGAATGCAAATAGGGTCACTAGCCATTGACCTATCTAGGTCTTCCCTAGGGAGGTAATTCTAAAATTGTTACATTGAGGGCATTCAACACAAGCTTAATAATTGAATGTGTGCTTTTATCACAAAGAGTGGTAGACAGACACTTATCCAGTCTACTCTGGTTAGTGTGCCAACTTATTATTTATGTTTGTTTCGTGGTCCAACTAAAACTACAATAATATTGGATAGTTGATTCGAGATTTTTTCTGGGAAGGTTCTTGTGGTGATGGCAGTATGGATAATGTGAATTGGGAGACCATTCAACTCCTTAAATTGAGGGGTGGTCTTGACATTGGTAATTTTCAGCATCGTGATTATGATTTTGTGGGTTATTGACCTGGTTGCTATTTTATTTATTTTTGGATGAAGATCTGGTTGCTAGTTGGGCTGGCATTCTCTTGGTAATGGCCAATGGGATCTCTCTACTTTCTGGAAGACCTATTAGCTTAGTTGTGGTTCAATTATGGTTGTTTTCCCTCCACGTTTTTGCCTTGCTCTCTATCCTGATGCTATGGTGGCTGATGTGTGGGTTTAGGTAACTGGTGCTTGGGATGTGCGTCTTCGCCCCAAACTTAATGATTTAGAAATGATTGAATGGCCTAATCTTTCTCATCTTTTGTCCTCAGTCACCTTCAGAACTCTCCTGATTCATGGACTTGGCCTCTTGCACCATCTATCAGTTACTTTGTTAAATCACTTATAGCTTCTCTTACTTGATTTCAAAATGGATACCGTGTGCCTTATGAATCTACAGGAAATCACGAGCGAGACGCTCAGATTTTTTACGAATGTTCTTTCCAACCCAACATTTCATTGCCTTGGAGTGGCTATGCCACTGTTCTAAGCATTTGTATTTCAAAGGAAACAATTATCTTTGATTGTTCTAACAGTTGTCTAATCTGTTACACGGTTGCAGCATGGAGCATTCTTATGCACTTGAAGCTTAAATCAACCCTTCTAGTGTTAATCCAAAAAAAATCAACCCTTCTAGTGTGCTTGGTTGGAAGAGTAGGGGCCTAGTAAACAAGTCAGAGAGAATGTCATTCGCAGAGGATTTTTATCATTCTAGTGATGGATCCGATCAGCCCTTGGTTGAAATATTAGACTAGAGGACTCTTTGTTGCAAAATATATTACATCCATGTCCATTAAATAGGATTGAGTCAGTCTAACGATGGAGGTTTTCCCTATCTTGTAACATGTACAACTTCGTAGATTTTTAAATTATTCTAGATAACCTGGACTTCCTTCGAATGCTCTAGAGTATATGAGAACTATCCAAGGTTTTTTATTATTTTAAATCTAGGATCCTATCCCACTGCAGATCAATTCTTCACAGCCCTCGTGCATTTTTCACATTTTCAAGAAGTTGTAAGTTGTGAAATTAGGGTCCCTTCCATGTTTTGACAATTAAAAGAATTGTGCTTGCTTGGAGTCTTCAATTAGGTTATTCATCAAGTTTGTGATTTCATGAACTTCTTACTGATGTACATTTCACAACTAATTATTTTGGAACTGAGGTGGACCTTGGGTATTATAAACAATGATAACTTGTAACAAAGCACTGTTTTATCCCAATATTCTTTTTACCTTGCCTGTCATCTCCCACATTTTCAAGTAAAATCTCTTTACTTCATTTTACTTATGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTGATTACTGTTCTCTATTGATAATTGTGATACATTGTTTCTCATGTTTGAATCTTGAATTTTCTTTGGCATGACCTCAAAATATTTTGCTTTTTGCCATCTATATCCTTGAATTATTGAGTCAATCAAGTTCCACGGACTGTTGAGACATGATATAGTTCTTTCTCTATATGTTTCGTTTACTTCTAAGAAATATCCTTCCATTTTCTGGGACTCAATATTATTCTTTGCGACCCTGTCCAATACTGAAGGATATATTTGTTTTATTTTATTTCCATTCCTAGGATACAAGTAAGAAATCACCGATGGGGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGAATCGTTGCTTGTGAGGGAGGTTAGTACATCTCCATACATTTATCCATACATTTCCAAGTAAACAATTTATTAAGGAAGGTGTGGTTCCTTATTTGCATTCAAACTCTTGCTGATTGCAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACACAGGACCATCATCACTAGAAAATCTGCAAGTGATCATTCCAGCCAGCAACCCTGAACTTGGAAAGATATAATACCCTACCTTTCCAAACTTGACTTCTGTAATGGTTATGCTCTTGCCTTCATAAATAGGAATTTGTGGATTCCATTCACTCGCACTTTGGCCAGGTCCATTGTCTTTGCCAAATTTATTTCATTGCTGTCTAATGACCCTATCTTGTTGACTCTA CTAAAACCAAACAAATTTTGAAGTAGGAATTAAATTAGTATTTTAACCTTATTTATTTGTGGGGGTGGGGGGAAAAAGTTGCATCCAGAGTTTTTACTCTAAGCTCCCCCTGACCGTAGCTCTTCTGCGCGCTCTCTCTCTCTCATCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCGATGGGGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGAATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACACAGGACCATCATCACTAGAAAATCTGCAAGTGATCATTCCAGCCAGCAACCCTGAACTTGGAAAGATATAATACCCTACCTTTCCAAACTTGACTTCTGTAATGGTTATGCTCTTGCCTTCATAAATAGGAATTTGTGGATTCCATTCACTCGCACTTTGGCCAGGTCCATTGTCTTTGCCAAATTTATTTCATTGCTGTCTAATGACCCTATCTTGTTGACTCTA ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCGATGGGGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGAATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACACAGGACCATCATCACTAG MASSLFKALVESSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMGLINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH Homology
BLAST of CcUC02G025080 vs. NCBI nr
Match: XP_023511819.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6571206.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011009.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.8 bits (517), Expect = 7.3e-49 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of CcUC02G025080 vs. NCBI nr
Match: XP_038900460.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 9.5e-49 Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of CcUC02G025080 vs. NCBI nr
Match: XP_022943963.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]) HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of CcUC02G025080 vs. NCBI nr
Match: XP_022986645.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of CcUC02G025080 vs. NCBI nr
Match: XP_022148513.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]) HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy Swiss-Prot
Match: Q9M9M6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 1.7e-40 Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy TrEMBL
Match: A0A6J1FXJ3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448533 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy TrEMBL
Match: A0A6J1JEL4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484323 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy TrEMBL
Match: A0A6J1D4A8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017141 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy TrEMBL
Match: A0A1S3CI88 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501074 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47 Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of CcUC02G025080 vs. ExPASy TrEMBL
Match: A0A0A0LNG2 (zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.8e-46 Identity = 94/103 (91.26%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of CcUC02G025080 vs. TAIR 10
Match: AT3G03070.1 (NADH-ubiquinone oxidoreductase-related ) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-41 Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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