CcUC02G024610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G024610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	16S rRNA (uracil(1498)-N(3))-methyltransferase
Location	CicolChr02: 8139289 .. 8143885 (-)
RNA-Seq Expression	CcUC02G024610
Synteny	CcUC02G024610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCATAGTTGTTCCTCTTCGCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACGGAGTTATTGAACCGCTCGTGTTTCAGAAGCTTCAGAGTTCGAGCTCTCTCGTCTTCATCTCTTGCCTCCTCAAATCAATCCCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTCCCTTCTTATAAGGCAATCCCTATCTCTTTTGCAATTCCCAAGTTTTTATATGATCGAAAATTGTGTATATAGTTGCGAATGAGGTTCTGATTTTGAACATTTGAAGTCCCCATTGATTGCCCTCCCGCTGTACCTTTTTCTGTGACCACAAGAGCTGGGGTTGTGTTAGTTTTGGATGGGTTCTGTCAATTTGAATGGATTATTGCTAGCTTTTTCCTTTTGGGTTTAAGTGGAGTGTTGGTGACTCTGAATTTTGGAAGACCAAGGAGTCGTGCCATTAGGGCTGGCATTTGATCCATGAAATTTTAACATGTTAGATGATATAATATTAAGTTTACCTTCACCCATCAGCTTAAGCTTTTGGGTCAATTGGTGATTTAAGATGTGTTTGGAATACATTTTCAAGTATTTAATTTAAAAAATAAGTCATTTTGGAAAAAAAAAATGGAGGGTTTGGAAACCAGTAAAAATGGATTTTGAATTGTATTCTAAACAACTTTTATCAAAAGAGTTTTAATAAAAATGAGTTTTTTTAAAAACATTTTTTTTGAAGTCAATCCAAACAGGCATGTAATATGGTATTAAAGTAGGTGATCCATGTAGTCCTTTGTTCAAATTTTGGAATTTTATTTCCTCCCTAATTAATATTGATTTCTACTTGCTGGGTATTTTACATATTTCAAGCCCACAAGTGAGGAGAGTGTTAGATGATATAGTATTAAATTTAACTTCACCCATCAACTTAAGCTTTTGGGTAAATCAGTGAGTTAACGATGAAGCTTTGTGTTCTTGTGCAAATTTGGAATGCTTTAGATGTTTCTTTGTGGGGAATTTATATTTATGAACATATGAGATGGATAATGGCATTTACTAGGATGAAATGGTATGGGATGGATGATTATTTTCCTAAAGGCATCTCTATTTGTCTCTTCAAGTCTTTTATAGGAAATTTCCATATAATGATAGTGGAGGGAAGTTTAACTACATTGCGTTATTCCATGCTTTAGCAAGCTCAATGCTCTATTTAATTTGATAATTTTGTAAAGTGAGATTGTGATGCTTGGTTTGATTGCGGGACTGGAACTGCTCTCATATCATATGCTTTATCATTATCCAGGGTGATGTTATTCATCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTGTTGAGGTTGAACACTGATGATAGGTACTACTTTTAATAGTCAACATCGTTTACTGTTATCTTGACACGTGGGTTGCTGGCTGGATTCTTTTCTTTCTTTATCTGTTTGTTATCTTCATGATAATTGGATGTAATTCAAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTAGAAGGGAGCATAAAGAACATTCGTGTCAATGGGCTTGACATTCTGGCTATGGAAGATCCAAAATCTGTTTTACCCCAAAGCACACAATGGCATGTATTTGCAGCCTGCGGTGAGATTCTTATGAGGAACCATTAAATGTTTACTACATCCTGTGGCATGGTAACTAACATGTTTCTGTTTAGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACGGTAAGTAAATGTAGATTAAGACATTGCAAATGAGAATTTTTGCTTCCTAATTTTGTTGCTGCCCTTTTCACTCTATTTAGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATCTCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTGAGTCAGTATTCAAGTTAAGTTTCTTCACCTCCGGAGTGGGAACATGAGACAGTTCAATTTGGCTTGTTGGTCATTGTCTAATTACGTTTGGGAAATTTTTATGCATCCTTCATCGCAGGTCAAAGACTCCACCAAATGAATCTGAATTCTCCATTGAAATTTGATGGTCTTTTGCACCTTGTGAGTTGCAATACAACTTTGTTCCAATACTTTCTTGACCTTTGAGCTTGGCTTGGCTATCATAGAAAAAGGTTCCCTCGTGCAAATAAAAAAAATCATAAAGCATCGTGTACACTTGTGATAATTTAAGAATTGAGTATATTTCTACAACAAATAGTCAAGTACTTCATGTACTAGTGCCTAGCTGAAGTGTTTACATTTCAGTTTTGATGGTTTTCTTGAAATTTTCAATTTTCTGAGATTCAAGGTTGTAGATCCATCTTAGAAGTAATCATTATGATGTCCTCTTGATGTGGCCTTTTTCATCCATGAACGTTCTTTTTTTTTTTTTTTTAGAAATTATGTTGATAAGAACCCGAGACATATTGATAAAAAGGAGAAAAACAGCCTAGGAGCCAGGTAGAGAGAACCCCAGCCTGAAGAAACTGTCAAGAATTGCATAGCATTTTATTCTACAAGGTTTTTTCTCTTTAACTTAATTTCATAACTGCTTTGGTTTTATTTTGTTCCATGTAGATTAATGAAACGAAGCTATCTTTCGTAGCAGTTGCAGAAGCGACACCGCTTGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGGTATATTTTATATGATAGTCCTGCTTTCTAAAAATGCGTGCAATTTTCCTACAATATTTAAAAGAGGTTCTTAGTGTAGTTGTTGTTTCCACATTCTGATGAAGATGCATATTAAAGTCTTACAAACCTCAACTCACAATTTGATAGCTTCTGTCATGAATAACATTTTTTCTTTTTAATTTGTGATATTGGATTTGCAACTAAGGATTGAAATATCCGTCAATATAGGTTGTGGTGAATGTATTTGTCATCAAGACTAATGGCCAAAAAATAGAGTAATAGCTCTTAATCTCCATACTTTTTACCACAAATTTTATTGCATGGAAAATCACCTATGTTATTTATTATTAATCGTCCACCTATAGAATAATAAACCCTTGAAAGCAGTGGTTAATTTTTTTGGGTTACCAGGTCATTTTAAACATGTTAGTTACATAAACTAGTACTTGAATGACTTTTCCCCTTCATGCTGGATAATATCTAGAAATCCTTTACTTCTCTTCAAACTTCATTAGTGCCTTGCATTTTTCTTTTAATTTTCTTCTTCAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTTGCAATCTTATCAACCCTCATGTTATGGTCTGACTCAAAAAGTTCTAGCTATTAATCTCTCTTTCAGGTTAGCCCTCGTCTATTTCTGTATTTTCCTACATATCTAATTTTTTCAAGGATGAACTAAAAATTAAAACTTGAAAGTTGACGAATGAATGAAACACAAAGGAAAGTATGAGTGAGAAAATGAGAGTGATCATGTGATAGCTATAGAAGATTTTGAAGGTAAGATTAATTTCTATTTTGGTCCTTAAATTTTTAAATGTTGTCTTAAACCATCAACTTCCAAAGGTTCTATTTTTGTGTTTTCCGAAAAAAATATATAGTTATATTTTTGTGTTTTTGGAAAAAATATCTAGTGCAGTCATTATTTTAATTTCCCATTAATCATTTAATAGGAACCTAAGATCATTTGCAAACCAGACTCCTAGTCTACTATATGAGACTCGAAACACTATCTACATAGATATTTTAGGTAAATGCACACAAGATTGAATTTAGTTAATAGCAATGACAAGGCAAGTTTGGGGACTAAAATAAAACATTTCATAGTTTATGGACCAAGACAGAAGAAGCAAGAAAGTAAGACTGAATATTTTACTGACAAATTTACCTTTTCTCTTGAATGGACAAAAGTACATTGCCATCGTGGAAAGATCTCGAAAAAAGACTAGTATCAGTTTATTGCTTCATCTCTTGACCTAATAGACACTACTCATTTTTCCTAATCCTCTGTGCACATCAGACCTACTCATGAAAGTTAACCCATCCCAAACTCACGAACATGACTTACAGTTAAAAACCATGACACATTCCACTAGTTTTCACTTGTTTTAGTTCTATTTACTGATTTATAGCAATGATCCATAGTGCGTTACAGACTTAGAAGAGCAAAACTAACAATGAAGGTAGTTTCTAGCATTATTTCTTAAGGTGTGTAAGGTGAAAGGATTGTTGTTCACACGAAGTTATTGCCTTGCTGTTTGCTTAAAAGATCAACTAAACAGTTTGCCCAAACTTGTGGGAAGTTTAAATTTAAAAGAAGTTTCTACTTGGTCTAGTTGCTTCAACTTTTTTACTGTTCACTGATCACAGGGTATCTCCAAAATCAGCACCATTGAAAAGCCTCAAAGTTGGAGCGTTTGCGGTTTTGGGGCATGTAATACCATTTGATGCATTCTACAAGGTGAATTCCATTTGA

mRNA sequence

ATGTTCCATAGTTGTTCCTCTTCGCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACGGAGTTATTGAACCGCTCGTGTTTCAGAAGCTTCAGAGTTCGAGCTCTCTCGTCTTCATCTCTTGCCTCCTCAAATCAATCCCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTCCCTTCTTATAAGGGTGATGTTATTCATCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTGTTGAGGTTGAACACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTAGAAGGGAGCATAAAGAACATTCGTGTCAATGGGCTTGACATTCTGGCTATGGAAGATCCAAAATCTGTTTTACCCCAAAGCACACAATGGCATGTATTTGCAGCCTGCGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATCTCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTCCACCAAATGAATCTGAATTCTCCATTGAAATTTGATGGTCTTTTGCACCTTATTAATGAAACGAAGCTATCTTTCGTAGCAGTTGCAGAAGCGACACCGCTTGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTTGCAATCTTATCAACCCTCATGTTATGGGTATCTCCAAAATCAGCACCATTGAAAAGCCTCAAAGTTGGAGCGTTTGCGGTTTTGGGGCATGTAATACCATTTGATGCATTCTACAAGGTGAATTCCATTTGA

Coding sequence (CDS)

ATGTTCCATAGTTGTTCCTCTTCGCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACGGAGTTATTGAACCGCTCGTGTTTCAGAAGCTTCAGAGTTCGAGCTCTCTCGTCTTCATCTCTTGCCTCCTCAAATCAATCCCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTCCCTTCTTATAAGGGTGATGTTATTCATCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTGTTGAGGTTGAACACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTAGAAGGGAGCATAAAGAACATTCGTGTCAATGGGCTTGACATTCTGGCTATGGAAGATCCAAAATCTGTTTTACCCCAAAGCACACAATGGCATGTATTTGCAGCCTGCGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATCTCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTCCACCAAATGAATCTGAATTCTCCATTGAAATTTGATGGTCTTTTGCACCTTATTAATGAAACGAAGCTATCTTTCGTAGCAGTTGCAGAAGCGACACCGCTTGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTTGCAATCTTATCAACCCTCATGTTATGGGTATCTCCAAAATCAGCACCATTGAAAAGCCTCAAAGTTGGAGCGTTTGCGGTTTTGGGGCATGTAATACCATTTGATGCATTCTACAAGGTGAATTCCATTTGA

Protein sequence

MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSAPLKSLKVGAFAVLGHVIPFDAFYKVNSI

Homology

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BLAST of CcUC02G024610 vs. NCBI nr
Match: XP_038877548.1 (ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 280/294 (95.24%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSCSSSQMR IGAFRP+LTELLNR  FRSFRVRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCSSSQMRAIGAFRPRLTELLNRLSFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGDVI LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASS+TPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSLTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK DGLLHLINETKLSFVAVAEATPLVS LASTEIESGGL
Sbjct: 181 ITLAATKQCQRLHQMDLNSPLKIDGLLHLINETKLSFVAVAEATPLVSALASTEIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLW   KS+
Sbjct: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS 294

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BLAST of CcUC02G024610 vs. NCBI nr
Match: XP_022972429.1 (uncharacterized protein LOC111470992 [Cucurbita maxima])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 272/294 (92.52%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSCSS QMRTIGA RPQLTEL +RSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGD+I LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKNIRVNG+DILAMEDP
Sbjct: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK DGLLH+INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LV+GPEGDFTEKEVNM+KEAGAIAVGLGPYRLRVETATVAILSTLMLW   KS+
Sbjct: 258 LVVGPEGDFTEKEVNMIKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS 311

[Close]

BLAST of CcUC02G024610 vs. NCBI nr
Match: XP_023553831.1 (uncharacterized protein LOC111811289 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553832.1 uncharacterized protein LOC111811289 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.0 bits (1395), Expect = 3.6e-150
Identity = 273/294 (92.86%), Postives = 279/294 (94.90%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSCSS QMRTIGA RPQLTEL NRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSCSSLQMRTIGAIRPQLTELFNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGDVI LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKN+RVNGLDILAMEDP
Sbjct: 78  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK  GLLH+INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIYGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LV+GPEGDFTEKEVNMMKEAGAI VGLGPYRLRVETATVAILSTLMLW   KS+
Sbjct: 258 LVVGPEGDFTEKEVNMMKEAGAIPVGLGPYRLRVETATVAILSTLMLWSDSKSS 311

[Close]

BLAST of CcUC02G024610 vs. NCBI nr
Match: XP_004136932.2 (uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >XP_031744709.1 uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >KGN43899.2 hypothetical protein Csa_017251 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 3.6e-150
Identity = 274/294 (93.20%), Postives = 280/294 (95.24%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSC SSQMRTIGAFRPQLT+LLN SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGDVI LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKNIRVNGL+ILAME+P
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           I LAATKQCQRLHQMNLNSPLK DGLL  INETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 IALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLW   KS+
Sbjct: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS 294

[Close]

BLAST of CcUC02G024610 vs. NCBI nr
Match: XP_022952195.1 (uncharacterized protein LOC111454941 [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 6.7e-149
Identity = 271/294 (92.18%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHS SS QMRTIGA RPQLTEL NRSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGDVI LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKN+RVNGLDILAMEDP
Sbjct: 78  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK DGLLH+INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LV+GPEGDFTEKEVNMMKEAGAI VGLGPYRLRVETATVAILSTLMLW   +S+
Sbjct: 258 LVVGPEGDFTEKEVNMMKEAGAIPVGLGPYRLRVETATVAILSTLMLWSDSRSS 311

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BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot
Match: P54461 (Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168) OX=224308 GN=rsmE PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.6e-15
Identity = 63/229 (27.51%), Postives = 106/229 (46.29%), Query Frame = 0


Query: 70  LEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAME--DPKSVLPQS 129
           + G+EV H+  V+R+N  D++   + +G   +  ++++  + +  L +E  +    LP  
Sbjct: 21  ITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIK 80

Query: 130 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV-----HRFERIT 189
               V+ A G  KG + +W+++K TELGA +  P    R     D++       R+ +I 
Sbjct: 81  ----VYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIA 140

Query: 190 LAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEA------TPLVSTLASTEIE 249
             A +Q  R     +     F  LL  + +     VA  E+      +   + ++S    
Sbjct: 141 KEAAEQSYRNEVPRVMDVHSFQQLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKG 200

Query: 250 SGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTL 286
           S  L+V GPEG  TE EV  + E   +  GLGP  LR ETA +  LS +
Sbjct: 201 SSLLIVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRTETAPLYALSAI 245

[Close]

BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot
Match: P44627 (Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rsmE PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13
Identity = 61/230 (26.52%), Postives = 115/230 (50.00%), Query Frame = 0


Query: 69  HLEGDEVWHMTKVLRLNTDDRVELFNGN-----GGLVEGSIKNIRVNGLDILAMEDPKSV 128
           +L  D   H+ +VLR+   +++ELF+G+       ++E + K+++V   +IL  E    +
Sbjct: 19  YLSEDAANHVARVLRMTEGEQLELFDGSNHIYPAKIIESNKKSVKV---EILGRE----L 78

Query: 129 LPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC-----PTISDNRVHRF 188
             + +   +       +G R ++ ++K  ELG + +TPL +ERC         D ++ ++
Sbjct: 79  ADKESHLKIHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQW 138

Query: 189 ERITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESG 248
           ++I +AA +QC R     +   +K        N+  L       A   + TL +  I +G
Sbjct: 139 QKIAIAACEQCGRNIVPEIRPLMKLQDWC-AENDGALKLNLHPRAHYSIKTLPT--IPAG 198

Query: 249 GL-LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML 288
           G+ L+IG EG  + +E+   ++ G   + LG   LR ETA++A +S L +
Sbjct: 199 GVRLLIGSEGGLSAQEIAQTEQQGFTEILLGKRVLRTETASLAAISALQI 238

[Close]

BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot
Match: Q8K9E4 (Ribosomal RNA small subunit methyltransferase E OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=rsmE PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.3e-13
Identity = 60/240 (25.00%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 54  RFFSQVLPSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLD 113
           ++F Q+       VI L      ++ KVLR+   D++E+FN    +    I  I  + ++
Sbjct: 11  KYFLQI-----NQVISLSKSYTHYIKKVLRMKKKDKLEIFNNTNYIFFSEILEINNHTIE 70

Query: 114 ILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCP----- 173
           I+ ++     L      H+       K  + ++ ++K  ELG +++TPL +E C      
Sbjct: 71  IIILKKQIKNLESPLLIHLGQVIS--KNEKMNFSIQKSVELGVNTITPLFSEYCNFQNKL 130

Query: 174 -TISDNRVHRFERITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLV 233
                 ++H +E I +++ +QC R +   + +P           E +   V    AT  +
Sbjct: 131 ICFPKKKIH-WENIVISSCEQCHRNNIPEIKNPEYILPWCKRTYENETKIVFSPSATFTI 190

Query: 234 STLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML 288
           + L   E  +   L+IG EG F+  E+  + + G I + LGP  LR ETA +A ++ L +
Sbjct: 191 NEL--PEKINCVRLLIGSEGGFSFLEIEKIIQYGFIPIKLGPRILRTETAVIAAITALQI 240

[Close]

BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot
Match: P72667 (Ribosomal RNA small subunit methyltransferase E OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsmE PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.3e-13
Identity = 58/216 (26.85%), Postives = 101/216 (46.76%), Query Frame = 0


Query: 74  EVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDPKSVLPQSTQWHVF 133
           ++ ++ +VLRL   D   + +G GG+    + ++      +L     ++ LP      V 
Sbjct: 86  QLHYLQRVLRLQKGDGFMVLDGGGGVWRAQLNDLAHGTAQLLETVSEQNELPLP----VT 145

Query: 134 AACGTLKGGRADWLVEKCTELGASSVTPLLTER-CPTISDNRVHRFERITLAATKQCQRL 193
            A    KG   + ++  CTELGA++  PLLTER     S N++ R++RI   A +Q +R 
Sbjct: 146 LAIALPKGSGFEEIIRPCTELGATAFQPLLTERTLLKPSQNKLERWQRIVTEAAEQSERQ 205

Query: 194 HQMNLNSPLKFDGLLHLI--NETKLSFVAVAEATPLVST-LASTEIESGGLLVIGPEGDF 253
               + +PL F   +  +   ET          +P++   L  + + +  +L  GPEG +
Sbjct: 206 WLPPVAAPLTFGQFVEKVAGPETLALLCVTRLNSPMLGAYLKQSNLPAQIVLATGPEGGW 265

Query: 254 TEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTL 286
           T+ E+++    G   V LG   LR  TA    L+ +
Sbjct: 266 TDNEISLAIAKGFQPVSLGKRILRAVTAPTVALAQI 297

[Close]

BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot
Match: P37995 (Ribosomal RNA small subunit methyltransferase E OS=Dickeya dadantii (strain 3937) OX=198628 GN=rsmE PE=3 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-12
Identity = 64/247 (25.91%), Postives = 111/247 (44.94%), Query Frame = 0


Query: 52  LPRFFSQVLPSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSI-----KN 111
           +PR F     + +G    L  D   H+ +VLR++    ++LF+G+  + +  I     KN
Sbjct: 3   IPRIFHPDTLTPQGGETDLSEDAANHVGRVLRMSAGQALQLFDGSNQVFDAEIVQAGKKN 62

Query: 112 IRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER 171
           +RV        E+ +S L      H+       +G + ++ ++K  ELG + +TPLL+ER
Sbjct: 63  VRVR-YAAGQTENRESPL------HLHLGQVMSRGEKMEFTIQKSIELGVNVITPLLSER 122

Query: 172 CPTISD-----NRVHRFERITLAATKQCQRLHQMNLNSPLKFDG-LLHLINETKLSFVAV 231
           C    D      ++ ++++I +AA +QC R     +      +       N  KL+    
Sbjct: 123 CGVKLDGERLEKKIAQWQKIAIAACEQCGRNRVPEIRPVQTLESWCAEPDNGLKLNLHPR 182

Query: 232 AEATPLVSTLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVA 288
           A  +     L  + I     L+IGPEG  +  E+ M    G   + LGP  LR ET  + 
Sbjct: 183 AAHSINTLPLPVSRIR----LLIGPEGGLSADEIAMTATQGFTDILLGPRVLRTETTALT 238

[Close]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL
Match: A0A6J1IBI6 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111470992 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-151
Identity = 272/294 (92.52%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSCSS QMRTIGA RPQLTEL +RSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGD+I LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKNIRVNG+DILAMEDP
Sbjct: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK DGLLH+INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LV+GPEGDFTEKEVNM+KEAGAIAVGLGPYRLRVETATVAILSTLMLW   KS+
Sbjct: 258 LVVGPEGDFTEKEVNMIKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS 311

[Close]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL
Match: A0A6J1GL34 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454941 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.3e-149
Identity = 271/294 (92.18%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHS SS QMRTIGA RPQLTEL NRSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PSYKGDVI LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIKN+RVNGLDILAMEDP
Sbjct: 78  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLK DGLLH+INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LV+GPEGDFTEKEVNMMKEAGAI VGLGPYRLRVETATVAILSTLMLW   +S+
Sbjct: 258 LVVGPEGDFTEKEVNMMKEAGAIPVGLGPYRLRVETATVAILSTLMLWSDSRSS 311

[Close]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL
Match: A0A1S3BZZ7 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103495322 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.2e-147
Identity = 269/292 (92.12%), Postives = 277/292 (94.86%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSC  SQMRTIGAFRPQLT+LL  S  RSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
           PS+KGDVI LEGDEVWHMTKVLRL T+DRVELFNGNGGLVEGSIKN+RVNGLDILAME+P
Sbjct: 61  PSHKGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLK DGLL LINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPK 293
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW   K
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK 292

[Close]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL
Match: A0A6J1D666 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111017293 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.6e-143
Identity = 264/295 (89.49%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSS-SLASSNQSRGGLPRFFSQV 60
           M H CSSSQMRTIGA RPQL++LL+RS FRSFRVRALSSS S ASSNQ+RGGLPRFFSQV
Sbjct: 1   MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQV 60

Query: 61  LPSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMED 120
           LPSYKGDV+ LEGDEVWHMTKVLRL TDDRVELFNGNGGLVEGSIK I VNGLDILAMED
Sbjct: 61  LPSYKGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIHVNGLDILAMED 120

Query: 121 PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFE 180
           PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERCPTISDNRV+RFE
Sbjct: 121 PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFE 180

Query: 181 RITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGG 240
           RITLAATKQCQRLH+MNLNSPLK  GLLHLINE+KL FVAVAEATPLVS LASTEIESGG
Sbjct: 181 RITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGG 240

Query: 241 LLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPKSA 295
           LLV+GPEGDFTEKE+ MMKEAGAIAVGLGP RLRVETATVAILSTLMLW   KS+
Sbjct: 241 LLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSS 295

[Close]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL
Match: A0A5A7SPG3 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001330 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 5.0e-142
Identity = 264/292 (90.41%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MFHSCSSSQMRTIGAFRPQLTELLNRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60
           MFHSC  SQMRTIGAFRPQLT+LL  S  RSF+VRALSSSSL SSNQSRGGLPRFFSQ  
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-- 60

Query: 61  PSYKGDVIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120
               GDVI LEGDEVWHMTKVLRL T+DRVELFNGNGGLVEGSIKN+RVNGLDILAME+P
Sbjct: 61  ----GDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLK DGLL LINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWVSPK 293
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLW   K
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK 286

[Close]

BLAST of CcUC02G024610 vs. TAIR 10
Match: AT1G50000.1 (methyltransferases )

HSP 1 Score: 340.1 bits (871), Expect = 1.9e-93
Identity = 177/282 (62.77%), Postives = 210/282 (74.47%), Query Frame = 0


Query: 15  AFRPQLTEL-------LNRSCFRSF-RVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGD 74
           A RP  ++L       L  S F+SF  V +   S L   NQSRGGLPRFFS  LPS KG 
Sbjct: 8   ASRPLFSDLPSLVRSWLPTSSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDDLPSRKGG 67

Query: 75  VIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDPKSVLPQ 134
           V+ ++G E WHM KVLRL  +DRVELFNG GGLVEG I++I   G+D +A ED K +LPQ
Sbjct: 68  VVRVQGSEFWHMAKVLRLKQEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVILPQ 127

Query: 135 STQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLAAT 194
             QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ AA 
Sbjct: 128 GMQWQVFAAFGTLKGGRADWLIEKCTELGASSVTPLLTERSPIISENRVDRLERVSFAAA 187

Query: 195 KQCQRLHQMNLNSPLKFDGLLHLINETKLSFVAVAEATPLVSTLASTEIESGGLLVIGPE 254
           KQCQRLHQM LN P+KF  LL  I ++KL  VA AEA PL++ + S+  ES GLL++GPE
Sbjct: 188 KQCQRLHQMVLNPPIKFGTLLDHILKSKLCLVATAEAKPLLNAVNSSAKESSGLLIVGPE 247

Query: 255 GDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLW 289
           GDFT+KEV MM EAG  AVGLGP+RLRVETAT+A+L+TL++W
Sbjct: 248 GDFTKKEVEMMLEAGGTAVGLGPHRLRVETATIALLATLVMW 289

[Close]

BLAST of CcUC02G024610 vs. TAIR 10
Match: AT1G50000.2 (methyltransferases )

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-64
Identity = 127/201 (63.18%), Postives = 145/201 (72.14%), Query Frame = 0


Query: 15  AFRPQLTEL-------LNRSCFRSF-RVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGD 74
           A RP  ++L       L  S F+SF  V +   S L   NQSRGGLPRFFS  LPS KG 
Sbjct: 8   ASRPLFSDLPSLVRSWLPTSSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDDLPSRKGG 67

Query: 75  VIHLEGDEVWHMTKVLRLNTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDPKSVLPQ 134
           V+ ++G E WHM KVLRL  +DRVELFNG GGLVEG I++I   G+D +A ED K +LPQ
Sbjct: 68  VVRVQGSEFWHMAKVLRLKQEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVILPQ 127

Query: 135 STQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLAAT 194
             QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ AA 
Sbjct: 128 GMQWQVFAAFGTLKGGRADWLIEKCTELGASSVTPLLTERSPIISENRVDRLERVSFAAA 187

Query: 195 KQCQRLHQMNLNSPLKFDGLL 208
           KQCQRLHQM LN P+KF  LL
Sbjct: 188 KQCQRLHQMVLNPPIKFGTLL 208

The following BLAST results are available for this feature:

BLAST of CcUC02G024610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877548.1	1.5e-153	95.24	ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida]	[more]
XP_022972429.1	1.6e-150	92.52	uncharacterized protein LOC111470992 [Cucurbita maxima]	[more]
XP_023553831.1	3.6e-150	92.86	uncharacterized protein LOC111811289 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_004136932.2	3.6e-150	93.20	uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >XP_031744709....	[more]
XP_022952195.1	6.7e-149	92.18	uncharacterized protein LOC111454941 [Cucurbita moschata]	[more]

BLAST of CcUC02G024610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P54461	4.6e-15	27.51	Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168...	[more]
P44627	2.5e-13	26.52	Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strai...	[more]
Q8K9E4	7.3e-13	25.00	Ribosomal RNA small subunit methyltransferase E OS=Buchnera aphidicola subsp. Sc...	[more]
P72667	7.3e-13	26.85	Ribosomal RNA small subunit methyltransferase E OS=Synechocystis sp. (strain PCC...	[more]
P37995	4.7e-12	25.91	Ribosomal RNA small subunit methyltransferase E OS=Dickeya dadantii (strain 3937...	[more]

BLAST of CcUC02G024610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBI6	7.8e-151	92.52	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GL34	3.3e-149	92.18	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BZZ7	5.2e-147	92.12	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1D666	1.6e-143	89.49	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7SPG3	5.0e-142	90.41	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CcUC02G024610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50000.1	1.9e-93	62.77	methyltransferases	[more]
AT1G50000.2	1.1e-64	63.18	methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006700	Ribosomal RNA small subunit methyltransferase E	PFAM	PF04452	Methyltrans_RNA	coord: 69..286 e-value: 1.9E-52 score: 177.8
IPR006700	Ribosomal RNA small subunit methyltransferase E	TIGRFAM	TIGR00046	TIGR00046	coord: 67..286 e-value: 3.8E-40 score: 135.7
IPR006700	Ribosomal RNA small subunit methyltransferase E	PANTHER	PTHR30027	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E	coord: 52..290
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 51..294 e-value: 4.8E-62 score: 211.2
None	No IPR available	CDD	cd18084	RsmE-like	coord: 135..283 e-value: 8.53159E-46 score: 151.16
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 56..108
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 128..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G024610.1	CcUC02G024610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity