CcUC02G024190 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G024190
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionpumilio homolog 12-like
LocationCicolChr02: 7527861 .. 7529476 (+)
RNA-Seq ExpressionCcUC02G024190
SyntenyCcUC02G024190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTTCTTGTCCAACACTAAAAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATAATAATAATAATAATAATTACTTAATCACCATTCTTAAAAAACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTTCATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTATCACTTCATCACACCACTTCCTAGCAGCCTGCCTTCATCATCTCGGGTTCGTATCTATATATTTATATATATATATATATATATTCTCACTTTCTTCTATTAAATTAATTATCTTTTTTTACAGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGGACCATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGAGGTATTTATTTATCTTTAAGTGAAGCTTAATCAAATAAAATTATTGAAAGTAAGAAATATAACGAGTGTTTATTGCATATATGACATGCAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGTAATTTCTTTTTATTATCTTATATATGCATATATTATTAACTCTTCTAGTTAGTTGGGGTTTGGATTAATTGATTGTATGTAATTATATATATTAACTGTTAATTAATTACAGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGCAATTATGTTATCCAGACAGCCATGTCCGTTGCTAAGGTTTGTTTATTTCCATCATTAATATTTTCATTTTCTCGAGGTATATAATTATTATGTTCATTTGTTAAGTTATTATATACTATTTTTCTAAATTTAATAACATGCCTATATTATTTATCGAGCCGAGAAATGCCCATTAATAGAATGAGATCTCATAAGCATATTATGTCGTCGCGATATTTAAAGGATCATTTTAGTCCATAACAACAATTTTTTTTTTTTTTTTGACAAAATTGCAGGGAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATTGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTTATGTTATATTTGAAGGAATATGC

mRNA sequence

ATGGAAAATTTCTTGTCCAACACTAAAAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATAATAATAATAATAATAATTACTTAATCACCATTCTTAAAAAACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTTCATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTATCACTTCATCACACCACTTCCTAGCAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGGACCATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGCAATTATGTTATCCAGACAGCCATGTCCGTTGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATTGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTTATGTTATATTTGAAGGAATATGC

Coding sequence (CDS)

ATGGAAAATTTCTTGTCCAACACTAAAAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATAATAATAATAATAATAATTACTTAATCACCATTCTTAAAAAACTTACAACAAATGATGTTCATTCACTAATTCTTCACCCACTTGGAAACAACTTCCTTCTTCATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTATCACTTCATCACACCACTTCCTAGCAGCCTGCCTTCATCATCTCGGACATCGAGTCGTCGTGAAATTAATCTCTCGTTTGACATACTCTTGTCAACAATGGACCATTGCATTATCGATGAGTCCTCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAGCCTTTCTCCACCGCCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTAGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCGTATCCCCATTGATACAAGATGCAGATAATCTTTCAATACATCCTTATGGGAATTATGTAATTCAATTTATGATTCAATTGGATGGGGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACGGATCGATATGGCAATTATGTTATCCAGACAGCCATGTCCGTTGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATTGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAA

Protein sequence

MENFLSNTKNSNANANGRINNNNNNNNNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKLQEF
Homology
[Close]
BLAST of CcUC02G024190 vs. NCBI nr
Match: KAE8645845.1 (hypothetical protein Csa_017253 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 2.9e-94
Identity = 169/244 (69.26%), Postives = 200/244 (81.97%), Query Frame = 0 

Query: 93  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLR 152
           HR+VV LIS L Y CQQW I L M PHVLTLAKDF  GH+V++SCF +  P  NELI+LR
Sbjct: 10  HRLVVALISHLKYPCQQWMIVLLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILR 69

Query: 153 IAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFM 212
           +AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPLIQD  +LS HPYGNYVIQFM
Sbjct: 70  VAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFM 129

Query: 213 IQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQL 272
           IQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L
Sbjct: 130 IQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEGNGRDRL 189

Query: 273 LQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSK 332
           +QICT++YGN+V+QT MS+AKG   +LLE+AIKSHW VLQ H YG+NVI+  +R KKK+K
Sbjct: 190 IQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAK 249

Query: 333 LQEF 337
           L ++
Sbjct: 250 LSKY 253

[Close]
BLAST of CcUC02G024190 vs. NCBI nr
Match: XP_008455521.1 (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 7.2e-85
Identity = 170/242 (70.25%), Postives = 198/242 (81.82%), Query Frame = 0 

Query: 14  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTF 73
           N N  I+N++ N+   N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TF
Sbjct: 7   NDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTF 66

Query: 74  INHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDF 133
           INHLLLSL T S  HFL   LH+LG+RVVV LIS L Y CQQW IAL MSPHVLTLAKDF
Sbjct: 67  INHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDF 126

Query: 134 QGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREV 193
           QGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREV
Sbjct: 127 QGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREV 186

Query: 194 LVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEK 250
           L++PLI+DA +LS HPYGNYVIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEK
Sbjct: 187 LITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEK 246

[Close]
BLAST of CcUC02G024190 vs. NCBI nr
Match: XP_022148742.1 (pumilio homolog 12-like [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 6.5e-70
Identity = 150/290 (51.72%), Postives = 197/290 (67.93%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FLA CLH LG + VVKL+ RL
Sbjct: 152 IHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRL 211

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
           +    Q   A+ +S H + LAK    GH VL +CF +LS   NE+ILL IA N  ELA++
Sbjct: 212 SNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKD 271

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R
Sbjct: 272 KNGCCILPFCILYAEG---TLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGAR 331

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           +I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ T++YGNY
Sbjct: 332 VIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNY 391

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL 334
           V Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A A + K++S +
Sbjct: 392 VAQKALSVAKGEAYNLLVRAIKSQQHILEFHPYGRSVVAAAVKRKRRSSI 436

[Close]
BLAST of CcUC02G024190 vs. NCBI nr
Match: XP_022725062.1 (putative pumilio homolog 8, chloroplastic [Durio zibethinus])

HSP 1 Score: 177.2 bits (448), Expect = 2.4e-40
Identity = 99/293 (33.79%), Postives = 166/293 (56.66%), Query Frame = 0 

Query: 42  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLIS 101
           +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + 
Sbjct: 268 DNLHELMVHQFANYLIQKLFEAGNQEHRTRLLHFLVHSEQRFLKVCTDVHGTRAVQKFME 327

Query: 102 RLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELA 161
           R++   Q+  +   + P  +TL  D   GH ++  CF   S    +L++  I ++C ++A
Sbjct: 328 RISTQEQRSILLSVLKPIAVTLTNDIH-GHHIIEQCFNKFSNEDTKLLVDEIVEHCLDIA 387

Query: 162 RNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIG 221
            +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++ 
Sbjct: 388 TDKSGCCVLQQCLDHAK---AEARKRLLAEITANAFVLSEHPYGNYVVQYVLGMRVPHVT 447

Query: 222 WRIINELKNKFVALSMDKFGSNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRY 281
             II  L   +V LSM+K+GSNVVEKCL    EG    II EI+   ++   L++  D Y
Sbjct: 448 SNIIVHLGGSYVTLSMNKYGSNVVEKCLKDAGEGHSARIITEIM---HDPDFLKVLQDPY 507

Query: 282 GNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL 334
           GNYV+Q+A+ V+KG+ H  L   I+ H+  L  H +GK V+A  K  K + +L
Sbjct: 508 GNYVVQSALHVSKGDLHNTLVEFIQRHYPFLHSHLFGKKVLARTKWRKNRLRL 553

[Close]
BLAST of CcUC02G024190 vs. NCBI nr
Match: KAG8497997.1 (hypothetical protein CXB51_006726 [Gossypium anomalum])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-39
Identity = 103/288 (35.76%), Postives = 164/288 (56.94%), Query Frame = 0 

Query: 42  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLIS 101
           + +H L++H   N  +  L +  +Q     LLL L+T    F+  C   LG R V KL+ 
Sbjct: 267 DQLHELMVHQFANYLIQKLFEVINQQQTTELLLVLVTRKQRFMEVCTDPLGTRAVQKLML 326

Query: 102 RLTYSCQQWTIALS-MSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFEL 161
           R+  S +Q +I LS + P  +TL  +   GH ++  C  + S    + I   IA NC ++
Sbjct: 327 RMK-SQEQISILLSVLKPTAVTLTNNIH-GHHIIDQCISTFSNEDTKHIADEIANNCMDI 386

Query: 162 ARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANI 221
           A +++GCC+L +C+ Y      + R+ +++ +I +A  LS H YGNYV+QF++ +   ++
Sbjct: 387 ATDKSGCCVLNQCLSYVQ---TEARDRMLAEIISNAFILSEHCYGNYVVQFVLGMRLRHV 446

Query: 222 GWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRY 281
              +I +L+  +V+LSM+K+GSNVVEKC+ C       II EI+    +   L++  D Y
Sbjct: 447 TSNLIMQLRGTYVSLSMNKYGSNVVEKCMKCSSEHASMIIKEIM---FDIDFLKVLQDAY 506

Query: 282 GNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHK 329
           GNYVIQ+A+ V+KG+ +  L R I  H+ VLQ H +GK V+   K  K
Sbjct: 507 GNYVIQSALHVSKGDLYDKLVRFILRHYSVLQSHLFGKMVLDRVKCSK 546

[Close]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match: Q9C9R6 (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM7 PE=3 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 2.7e-34
Identity = 92/279 (32.97%), Postives = 149/279 (53.41%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +
Sbjct: 374 VVELMMDPFGNYLMQKLLDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETI 433

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
               Q   + L++ P  L L KD  G H V++ C   LS   N+ I     + C E+A +
Sbjct: 434 RSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATH 493

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    
Sbjct: 494 RHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAM 553

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   D Y N+
Sbjct: 554 MLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANF 613

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           VIQ A++  KG  H  L   I+ H  +L+ +PY K + +
Sbjct: 614 VIQAALAATKGPLHASLVEVIRPH-SILRNNPYCKRIFS 644

[Close]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match: Q9LM20 (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM8 PE=3 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-33
Identity = 88/279 (31.54%), Postives = 151/279 (54.12%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +
Sbjct: 239 VVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESI 298

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
               Q   +  ++ P  L L +D  G H V++ C   LS   NE I     + C ++A +
Sbjct: 299 KTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATH 358

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    
Sbjct: 359 RHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAA 418

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   D Y N+
Sbjct: 419 MLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANF 478

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           VIQ A++V KG+ H  L   I+ H  +L+ +PY K + +
Sbjct: 479 VIQAALAVTKGSLHATLVEVIRPH-SILRNNPYCKRIFS 509

[Close]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match: Q9LDW3 (Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-30
Identity = 90/290 (31.03%), Postives = 149/290 (51.38%), Query Frame = 0 

Query: 33  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLG 92
           + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G
Sbjct: 271 VMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYG 330

Query: 93  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLR 152
            RVV KLI  +T   Q   +  ++ P  L+L ++  G H +L +C    SP  N+ IL  
Sbjct: 331 TRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL-NCLKFFSPNDNKFILEA 390

Query: 153 IAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFM 212
             + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++
Sbjct: 391 ATKFCIEIATTRHGCCVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYI 450

Query: 213 IQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQL 272
           I+      G  ++ EL+  +V L+  KFGS+VVEKCL         I+ E++   N   L
Sbjct: 451 IEKKVG--GVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYL 510

Query: 273 LQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           LQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K + +
Sbjct: 511 LQ---DPYANYVIQCALSKTKGFVRASLVEKVR-RYENLKMTPYCKRIFS 550

[Close]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match: Q1PFN9 (Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.4e-29
Identity = 92/280 (32.86%), Postives = 146/280 (52.14%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISR 103
           V  L + P GN  +  L   S +     L++S++TS+    +  CL+  G RVV K+I  
Sbjct: 290 VVELSMDPFGNYIVQKLFDVSDEE-QRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIET 349

Query: 104 LTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELAR 163
           +    Q   +   + P  L L KD  G H V++SC  +L P  NE +L    + C E+A 
Sbjct: 350 VKTKQQIALVKSGLKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAI 409

Query: 164 NQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGW 223
           ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  
Sbjct: 410 HRHGCCVLQCCI---SNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV-- 469

Query: 224 RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGN 283
           +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   D Y N
Sbjct: 470 KLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYAN 529

Query: 284 YVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           YVIQTA+SV KG     L   +   +  L   PY K + +
Sbjct: 530 YVIQTALSVTKGPVRAKLVAKV-YRYGKLHSSPYCKKIFS 558

[Close]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match: Q9LVC3 (Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-27
Identity = 101/330 (30.61%), Postives = 159/330 (48.18%), Query Frame = 0 

Query: 10  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLL 69
           NS A A G+I     + +   +L  I  +   ND+             L++ P GN  + 
Sbjct: 273 NSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQ 332

Query: 70  HLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSP 129
            LL+  ++     ++ S+       +       G R V K++       +   I  ++  
Sbjct: 333 KLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKH 392

Query: 130 HVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSN 189
            ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS 
Sbjct: 393 GIVHLIKNVNGNH-VVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSE 452

Query: 190 DKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMD 249
            + +Q    LVS +  +A  LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM 
Sbjct: 453 GEQKQ---HLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQ 512

Query: 250 KFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR 309
           K  SNVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KGN H 
Sbjct: 513 KCSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHA 572

Query: 310 LLERAIKSHWFVLQFHPYGKNVIALAKRHK 329
           LL  AIK +   L+ +PYGK V++     K
Sbjct: 573 LLVDAIKLNISSLRTNPYGKKVLSALSSKK 596

[Close]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match: A0A1S3C139 (putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495672 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 170/242 (70.25%), Postives = 198/242 (81.82%), Query Frame = 0 

Query: 14  NANGRINNNNNNN---NNNNYLITILKKLTTNDVHSLILHPLGNNFLLHLLQ--SSHQTF 73
           N N  I+N++ N+   N+N +L ++L++LTT  +H +I+HPLGN FLLHLLQ    H TF
Sbjct: 7   NDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTF 66

Query: 74  INHLLLSLIT-SSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDF 133
           INHLLLSL T S  HFL   LH+LG+RVVV LIS L Y CQQW IAL MSPHVLTLAKDF
Sbjct: 67  INHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDF 126

Query: 134 QGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREV 193
           QGGH+V++SCF S SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREV
Sbjct: 127 QGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREV 186

Query: 194 LVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEK 250
           L++PLI+DA +LS HPYGNYVIQFMIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEK
Sbjct: 187 LITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEK 246

[Close]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match: A0A0A0K7S4 (PUM-HD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-72
Identity = 134/190 (70.53%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 147 ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGN 206
           +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVL+SPLIQD  +LS HPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 207 YVIQFMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILEN 266
           YVIQFMIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE 
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEG 121

Query: 267 NNENQLLQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKR 326
           N  ++L+QICT++YGN+V+QT MS+AKG   +LLE+AIKSHW VLQ H YG+NVI+  +R
Sbjct: 122 NGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRR 181

Query: 327 HKKKSKLQEF 337
            KKK+KL ++
Sbjct: 182 DKKKAKLSKY 191

[Close]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match: A0A6J1D5W5 (pumilio homolog 12-like OS=Momordica charantia OX=3673 GN=LOC111017335 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.1e-70
Identity = 150/290 (51.72%), Postives = 197/290 (67.93%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           +H L+LHPLGN+ +  L +  H+ FI  LLLSLI     FLA CLH LG + VVKL+ RL
Sbjct: 152 IHELMLHPLGNDVVQTLFRFCHEYFIKDLLLSLIGKQDLFLAVCLHSLGQKAVVKLLCRL 211

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
           +    Q   A+ +S H + LAK    GH VL +CF +LS   NE+ILL IA N  ELA++
Sbjct: 212 SNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKD 271

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCCIL  CI Y+      LR VLV+PLIQ+A +LS H Y N+VIQF+I+LD ANIG R
Sbjct: 272 KNGCCILPFCILYAEG---TLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGAR 331

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           +I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ T++YGNY
Sbjct: 332 VIQVLRNKFVELCLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNY 391

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL 334
           V Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A A + K++S +
Sbjct: 392 VAQKALSVAKGEAYNLLVRAIKSQQHILEFHPYGRSVVAAAVKRKRRSSI 436

[Close]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match: A0A6P5XBS2 (putative pumilio homolog 8, chloroplastic OS=Durio zibethinus OX=66656 GN=LOC111281647 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-40
Identity = 99/293 (33.79%), Postives = 166/293 (56.66%), Query Frame = 0 

Query: 42  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLIS 101
           +++H L++H   N  +  L ++ +Q     LL  L+ S   FL  C    G R V K + 
Sbjct: 268 DNLHELMVHQFANYLIQKLFEAGNQEHRTRLLHFLVHSEQRFLKVCTDVHGTRAVQKFME 327

Query: 102 RLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELA 161
           R++   Q+  +   + P  +TL  D   GH ++  CF   S    +L++  I ++C ++A
Sbjct: 328 RISTQEQRSILLSVLKPIAVTLTNDIH-GHHIIEQCFNKFSNEDTKLLVDEIVEHCLDIA 387

Query: 162 RNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIG 221
            +++GCC+LQ+C++++     + R+ L++ +  +A  LS HPYGNYV+Q+++ +   ++ 
Sbjct: 388 TDKSGCCVLQQCLDHAK---AEARKRLLAEITANAFVLSEHPYGNYVVQYVLGMRVPHVT 447

Query: 222 WRIINELKNKFVALSMDKFGSNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTDRY 281
             II  L   +V LSM+K+GSNVVEKCL    EG    II EI+   ++   L++  D Y
Sbjct: 448 SNIIVHLGGSYVTLSMNKYGSNVVEKCLKDAGEGHSARIITEIM---HDPDFLKVLQDPY 507

Query: 282 GNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKKKSKL 334
           GNYV+Q+A+ V+KG+ H  L   I+ H+  L  H +GK V+A  K  K + +L
Sbjct: 508 GNYVVQSALHVSKGDLHNTLVEFIQRHYPFLHSHLFGKKVLARTKWRKNRLRL 553

[Close]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match: A0A6P3YS61 (pumilio homolog 12-like OS=Ziziphus jujuba OX=326968 GN=LOC107403977 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.6e-40
Identity = 106/295 (35.93%), Postives = 165/295 (55.93%), Query Frame = 0 

Query: 42  NDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLIS 101
           +++H L++   GN  +  L++  +   ++ +L+S+I++   F   C+   G RVV KL+ 
Sbjct: 66  DNLHDLMVQQFGNYLIQKLIEVVNANQLSEILVSVISNEQRFKEVCIDEHGTRVVQKLLG 125

Query: 102 RLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELA 161
            L    QQ+    ++S   + L K   G H V++ CF  LSP  N+ +L  +A NC E+A
Sbjct: 126 YLKVPEQQFLAMSAVSRITVALTKSSNGNH-VIQKCFAELSPEVNKPLLDEVAANCLEIA 185

Query: 162 RNQAGCCILQECIEYS-----NDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLD 221
            +++GCCILQ C+ Y+       +  + ++ L++ +I +A  LS HPYGNYV+Q +I   
Sbjct: 186 TDKSGCCILQTCVSYACAAHHAPQTGEAKKRLLAEIISNAQILSEHPYGNYVVQLII--- 245

Query: 222 GANIGWRIINELKNKFVALSMDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQ 281
                  I+ +L+ K+V+LSM+K GSNVVEKCL  S  E     I+ EI+   N    L 
Sbjct: 246 APGTLPDILTQLRGKYVSLSMNKHGSNVVEKCLKESKTEQYTSIIVDEII---NSPHFLD 305

Query: 282 ICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIALAKRHKK 330
           +  D YGNYV Q+A+ V+ G  H  L R I  H   L  HP+GK V+  A+  K+
Sbjct: 306 VLQDPYGNYVAQSALEVSMGRTHSDLVRLILMHEKSLHSHPHGKRVLQQARASKQ 353

[Close]
BLAST of CcUC02G024190 vs. TAIR 10
Match: AT1G78160.1 (pumilio 7 )

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-35
Identity = 92/279 (32.97%), Postives = 149/279 (53.41%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           V  L++ P GN  +  LL    +     ++L         +   L+  G RVV +L+  +
Sbjct: 374 VVELMMDPFGNYLMQKLLDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETI 433

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
               Q   + L++ P  L L KD  G H V++ C   LS   N+ I     + C E+A +
Sbjct: 434 RSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATH 493

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCC+LQ+CI YS   +RQ RE L++ + +++  L+  P+GNY +QF+I+L   +    
Sbjct: 494 RHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAM 553

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   D Y N+
Sbjct: 554 MLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANF 613

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           VIQ A++  KG  H  L   I+ H  +L+ +PY K + +
Sbjct: 614 VIQAALAATKGPLHASLVEVIRPH-SILRNNPYCKRIFS 644

[Close]
BLAST of CcUC02G024190 vs. TAIR 10
Match: AT1G22240.1 (pumilio 8 )

HSP 1 Score: 145.2 bits (365), Expect = 9.5e-35
Identity = 88/279 (31.54%), Postives = 151/279 (54.12%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRL 103
           V  L++ P GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  +
Sbjct: 239 VVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESI 298

Query: 104 TYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARN 163
               Q   +  ++ P  L L +D  G H V++ C   LS   NE I     + C ++A +
Sbjct: 299 KTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATH 358

Query: 164 QAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWR 223
           + GCC+LQ+CI YS+      RE LV+ + +++  L+  PYGNY +QF+++L   +    
Sbjct: 359 RHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAA 418

Query: 224 IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNY 283
           ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   D Y N+
Sbjct: 419 MLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANF 478

Query: 284 VIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           VIQ A++V KG+ H  L   I+ H  +L+ +PY K + +
Sbjct: 479 VIQAALAVTKGSLHATLVEVIRPH-SILRNNPYCKRIFS 509

[Close]
BLAST of CcUC02G024190 vs. TAIR 10
Match: AT4G08840.1 (pumilio 11 )

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-31
Identity = 90/290 (31.03%), Postives = 149/290 (51.38%), Query Frame = 0 

Query: 33  ITILKKLTTNDVHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSSHHFLAACLHHLG 92
           + I+ K   N+V  L   P GN  +  L++  ++     +L+ L +     +   +++ G
Sbjct: 271 VMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYG 330

Query: 93  HRVVVKLISRLTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLR 152
            RVV KLI  +T   Q   +  ++ P  L+L ++  G H +L +C    SP  N+ IL  
Sbjct: 331 TRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL-NCLKFFSPNDNKFILEA 390

Query: 153 IAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFM 212
             + C E+A  + GCC+LQ C+ YS   + +  E LV  + +++  L+  P+GNY++Q++
Sbjct: 391 ATKFCIEIATTRHGCCVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYI 450

Query: 213 IQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQL 272
           I+      G  ++ EL+  +V L+  KFGS+VVEKCL         I+ E++   N   L
Sbjct: 451 IEKKVG--GVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYL 510

Query: 273 LQICTDRYGNYVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           LQ   D Y NYVIQ A+S  KG     L   ++  +  L+  PY K + +
Sbjct: 511 LQ---DPYANYVIQCALSKTKGFVRASLVEKVR-RYENLKMTPYCKRIFS 550

[Close]
BLAST of CcUC02G024190 vs. TAIR 10
Match: AT1G35730.1 (pumilio 9 )

HSP 1 Score: 130.2 bits (326), Expect = 3.1e-30
Identity = 92/280 (32.86%), Postives = 146/280 (52.14%), Query Frame = 0 

Query: 44  VHSLILHPLGNNFLLHLLQSSHQTFINHLLLSLITSS-HHFLAACLHHLGHRVVVKLISR 103
           V  L + P GN  +  L   S +     L++S++TS+    +  CL+  G RVV K+I  
Sbjct: 290 VVELSMDPFGNYIVQKLFDVSDEE-QRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIET 349

Query: 104 LTYSCQQWTIALSMSPHVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELAR 163
           +    Q   +   + P  L L KD  G H V++SC  +L P  NE +L    + C E+A 
Sbjct: 350 VKTKQQIALVKSGLKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAI 409

Query: 164 NQAGCCILQECIEYSNDKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGW 223
           ++ GCC+LQ CI   ++ +   RE LV+ + +++ +LS  P+GNYV+Q++I    + +  
Sbjct: 410 HRHGCCVLQCCI---SNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV-- 469

Query: 224 RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGN 283
           +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   D Y N
Sbjct: 470 KLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYAN 529

Query: 284 YVIQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA 323
           YVIQTA+SV KG     L   +   +  L   PY K + +
Sbjct: 530 YVIQTALSVTKGPVRAKLVAKV-YRYGKLHSSPYCKKIFS 558

[Close]
BLAST of CcUC02G024190 vs. TAIR 10
Match: AT5G56510.1 (pumilio 12 )

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-28
Identity = 101/330 (30.61%), Postives = 159/330 (48.18%), Query Frame = 0 

Query: 10  NSNANANGRINNNNNNNNNNNYLITILKKLTTNDVH-----------SLILHPLGNNFLL 69
           NS A A G+I     + +   +L  I  +   ND+             L++ P GN  + 
Sbjct: 273 NSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQ 332

Query: 70  HLLQSSHQTFINHLLLSLITSSHHFLAACLHHLGHRVVVKLISRLTYSCQQWTIALSMSP 129
            LL+  ++     ++ S+       +       G R V K++       +   I  ++  
Sbjct: 333 KLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKH 392

Query: 130 HVLTLAKDFQGGHQVLRSCFYSLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSN 189
            ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS 
Sbjct: 393 GIVHLIKNVNGNH-VVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSE 452

Query: 190 DKLRQLREVLVSPLIQDADNLSIHPYGNYVIQFMIQLDGANIGWRIINELKNKFVALSMD 249
            + +Q    LVS +  +A  LS  P+GNYV+Q++ +L      + I+ +L+  +  LSM 
Sbjct: 453 GEQKQ---HLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQ 512

Query: 250 KFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTDRYGNYVIQTAMSVAKGNAHR 309
           K  SNVVEKCL   +      I  I E  N  +L Q+  D YGNYVIQ A+  +KGN H 
Sbjct: 513 KCSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHA 572

Query: 310 LLERAIKSHWFVLQFHPYGKNVIALAKRHK 329
           LL  AIK +   L+ +PYGK V++     K
Sbjct: 573 LLVDAIKLNISSLRTNPYGKKVLSALSSKK 596

The following BLAST results are available for this feature:
BLAST of CcUC02G024190 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645845.12.9e-9469.26hypothetical protein Csa_017253 [Cucumis sativus][more]
XP_008455521.17.2e-8570.25PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo][more]
XP_022148742.16.5e-7051.72pumilio homolog 12-like [Momordica charantia][more]
XP_022725062.12.4e-4033.79putative pumilio homolog 8, chloroplastic [Durio zibethinus][more]
KAG8497997.11.2e-3935.76hypothetical protein CXB51_006726 [Gossypium anomalum][more]
BLAST of CcUC02G024190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9R62.7e-3432.97Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU... [more]
Q9LM201.3e-3331.54Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU... [more]
Q9LDW33.1e-3031.03Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2[more]
Q1PFN94.4e-2932.86Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1[more]
Q9LVC31.9e-2730.61Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2[more]
BLAST of CcUC02G024190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C1393.5e-8570.25putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349567... [more]
A0A0A0K7S42.0e-7270.53PUM-HD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4... [more]
A0A6J1D5W53.1e-7051.72pumilio homolog 12-like OS=Momordica charantia OX=3673 GN=LOC111017335 PE=4 SV=1[more]
A0A6P5XBS21.2e-4033.79putative pumilio homolog 8, chloroplastic OS=Durio zibethinus OX=66656 GN=LOC111... [more]
A0A6P3YS617.6e-4035.93pumilio homolog 12-like OS=Ziziphus jujuba OX=326968 GN=LOC107403977 PE=4 SV=1[more]
BLAST of CcUC02G024190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78160.11.9e-3532.97pumilio 7 [more]
AT1G22240.19.5e-3531.54pumilio 8 [more]
AT4G08840.12.2e-3131.03pumilio 11 [more]
AT1G35730.13.1e-3032.86pumilio 9 [more]
AT5G56510.11.3e-2830.61pumilio 12 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 152..187
e-value: 6.0
score: 14.5
coord: 267..301
e-value: 1.9
score: 17.5
coord: 191..226
e-value: 11.0
score: 12.5
coord: 78..113
e-value: 280.0
score: 1.8
coord: 227..262
e-value: 0.003
score: 26.8
coord: 39..75
e-value: 13.0
score: 11.8
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 232..254
e-value: 1.3E-6
score: 28.0
coord: 271..293
e-value: 8.6E-4
score: 18.9
coord: 199..214
e-value: 0.0027
score: 17.4
coord: 156..183
e-value: 2.3E-6
score: 27.1
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 262..305
score: 9.107206
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 227..249
score: 7.847311
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 191..226
score: 7.637328
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 152..190
score: 8.757235
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 14..334
e-value: 7.5E-64
score: 217.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR12537:SF147PUMILIO HOMOLOG 12coord: 77..325
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 77..325
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..328
score: 40.683079
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 31..323

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G024190.1CcUC02G024190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006417 regulation of translation
molecular_function GO:0003723 RNA binding