CcUC02G023250 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATTCAGAGATTAGAACTTTGCTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTTGTCGCCGAATCCGTTGGCGACGTCATCCACCGGGAATGTCAGCCGCAGGCTCTGCCGACGGCGGGCCCTAGGGTTCCGGTTCCTTTCGTCGGCTTTTACCCGTAAATCCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCGAAGTTAATGTGAATTTTGTTTTGTTTTTTTTTTTTTTTTTTTAGTAATTAAATCGAGTTATTATTGTATTTATCTTTTGGAAAGAATCCAATTATCTTTCTTTTTTAGTACGAAATTATCCAATTGTTATTTCGTTGTAAATTGTTGGTTTTATCGTCATTTCGACGCCGGACCTTCTGACCAACAATAATTCAGGAACGTGAATTCGCGCCTTAATAATCTAAATTTATGTTCTTAATTTTTTTATAAAAAAAATTAAAATTAAAATAAAGTTATAATTCAAATAATTTTTTGTGGATTGGATGGGTGCTTGTGTAAATAGTGTAGAATTTTGGGGTCCTGGTGTGAAATATAATTATTATCCAATGGCTTATGTGAAATTATGGAAGTTTTCTCTCGAGTTGCCCGATTTGAATTGA ATGGCGATTCAGAGATTAGAACTTTGCTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTTGTCGCCGAATCCGTTGGCGACGTCATCCACCGGGAATGTCAGCCGCAGGCTCTGCCGACGGCGGGCCCTAGGGTTCCGGTTCCTTTCGTCGGCTTTTACCCTGTAGAATTTTGGGGTCCTGGTGTGAAATATAATTATTATCCAATGGCTTATGTGAAATTATGGAAGTTTTCTCTCGAGTTGCCCGATTTGAATTGA ATGGCGATTCAGAGATTAGAACTTTGCTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTTGTCGCCGAATCCGTTGGCGACGTCATCCACCGGGAATGTCAGCCGCAGGCTCTGCCGACGGCGGGCCCTAGGGTTCCGGTTCCTTTCGTCGGCTTTTACCCTGTAGAATTTTGGGGTCCTGGTGTGAAATATAATTATTATCCAATGGCTTATGTGAAATTATGGAAGTTTTCTCTCGAGTTGCCCGATTTGAATTGA MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGPRVPVPFVGFYPVEFWGPGVKYNYYPMAYVKLWKFSLELPDLN Homology
BLAST of CcUC02G023250 vs. NCBI nr
Match: KAA0031272.1 (hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa] >KGN43958.1 hypothetical protein Csa_017301 [Cucumis sativus] >TYK06724.1 hypothetical protein E5676_scaffold13G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G023250 vs. NCBI nr
Match: XP_015874275.1 (uncharacterized protein LOC107411246 [Ziziphus jujuba]) HSP 1 Score: 67.4 bits (163), Expect = 7.0e-08 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of CcUC02G023250 vs. NCBI nr
Match: OAY29431.1 (hypothetical protein MANES_15G144200v8 [Manihot esculenta]) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of CcUC02G023250 vs. NCBI nr
Match: MBA0799196.1 (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 57.8 bits (138), Expect = 5.5e-05 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CcUC02G023250 vs. NCBI nr
Match: KAB2042822.1 (hypothetical protein ES319_D02G244200v1 [Gossypium barbadense] >KAG4160081.1 hypothetical protein ERO13_D02G211700v2 [Gossypium hirsutum] >TYG80995.1 hypothetical protein ES288_D02G261900v1 [Gossypium darwinii] >TYH85421.1 hypothetical protein ES332_D02G265400v1 [Gossypium tomentosum] >TYI95055.1 hypothetical protein E1A91_D02G250500v1 [Gossypium mustelinum]) HSP 1 Score: 57.4 bits (137), Expect = 7.2e-05 Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of CcUC02G023250 vs. ExPASy TrEMBL
Match: A0A5D3C626 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00250 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G023250 vs. ExPASy TrEMBL
Match: A0A0A0K3A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074910 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of CcUC02G023250 vs. ExPASy TrEMBL
Match: A0A6P3ZHL2 (uncharacterized protein LOC107411246 OS=Ziziphus jujuba OX=326968 GN=LOC107411246 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.4e-08 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of CcUC02G023250 vs. ExPASy TrEMBL
Match: A0A2C9UG64 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G144200 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.4e-06 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of CcUC02G023250 vs. ExPASy TrEMBL
Match: A0A7J9GNP8 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_009726 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CcUC02G023250 vs. TAIR 10
Match: AT3G19030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxine biosynthetic process, homoserine biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 3.8e-04 Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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