![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G023200 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTTTGCTGATCTTATCCTCTCTCATTTCTTTTTGCTAAGCTGTTTTGTTTCTGATATATCTGAGTTATGGTTTGAGTAAATTAATGGTGAATTTTGAGGTGGAAGAAGCTTAAAAATTCATGAACTAGGATCTTACCCATGGCTTCCCTTGCACCCCATCTTTATACTTAATTCAATACCAAGAAAGGATATACAATGAAGTAAGATAATTGGAATTAATTAAGATTACTTCAACTTATTATTTTCCCCACTCATATAAAACAGTGTTTGTCCATGGTTTATTGCTTCTAAAATGGTTTAATTCAATGTGGATGGATTTTCAATTACTTAAAGGGTAGAGAGATTTCAATTTTCGACCTCGAAGAATGAAATATACAATCAATTTATTGAATTTTGGTAAAATATTAGAAGTACAGTTGTCCTAAATCGAAAAATTAAAAGAATGATGGGCTCCAAGTACAATAAAATGAGTATATGTCTTTGGTTTCAAATTTTCTCAGTTATAAATACTTTAAGGGTAATTGCGTTGGATAGAACTTTTAGGGATAATTAAGCGTATGCTAATTTGTTTAAAAAATTGTAAATATAACAAAATCTATCAATGATAGACTCTATCATTGATGGACTCCCATCAACGATATGGTCTATCACTGATGGACGTCAAAAATATAATTTAAAATTTGTTATACTGCAAATATTTTGGATTTAATTGCTATTTTTGCAACTACCTCATACTTTAAGTGTAGGGCCATAATACTACTGAATTATGGTAGAAAACGGGATAATTTTTTGACTGAATCGAAAGCTTTGACAACTTTGGGTTTGCCAATAATAATAATAATAATTAGTCAAGTATGATTGGTTCTATTCAATTTAAGTTACATGGTTGATATTTGTCCATATGCTTTTAATAAATCTTAAATTTAATTTATATACTTTTGGTAAAAAAAATTTCTAATAATTTGTAAATCTTAAATTTACTTATTTGAATTTATTTTTAGGGTAATTGTTTTAAATGACAAAACTGCCAGAAAAATTTTCAAATATAACAAAATGTCACTGACTAATATCATCTATGATTGTCTATCAACTATAGTATAGACAATGACATTCAAAAAAAATTTTCGAGGGGGAAATGAGAGATATTTTGTTCCACCACAAAGAATTATTTGATTTTTGCATTTCAACGAATTTACATGATACATCAGAACAAGCATTTCTAGGATTTAATGATTCATAAAAGTGGAGTCATACTGTTAACTAGCCACATTGATTTGGTAATAAGATAATAACGAATAGAAAAAAATTAATGGCTTGGATCGTGTATCAACAGTCAATCCCTGGTCGAGGTAGAGGATAAGGTTCCATGGGAACAATTATTTATTTCTATTTCAGCTCGTCTCTTTTTTTTAAGAAAAAAGCGAGGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAATAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGGGGTTACCCGATATTGTAATAATTGTTGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTAGGAATTCCAACTATTTGTTTAATTGATACAAATTGTGACCCNGAGGTTACCCGATATTGTAATAATCGTTGATCAACAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTGGAATTAAACAAAATTCAAATCTCAAGGGTAAAATTGTGAAATTTTGAAATGTAGGGACTAAATTGAAATAAAACTCAAAACTTAAGGAGTAAGGGGTTGTGTGGGAGTTGAGTTGGTTATTATAATATATATGTTGGTTGTAAACTATTTTAGCATGTGTTACAAATTAGGGGAGAGAATGGTCACCAAATAGTAAACACTATAGACAATGAAATTTCGCAAATAGTTTTACTGTAGACAAATGTGAGTTATACTAATTGGGAACTTCAACTATCATAATAAAAGACCCAAATATTGACCGGGCTATAATAGCCCACTCCACCCAAGGCAAGTTGTGGGCCAAAATGTTCCCTAAATGTGTATCATTTGAAACCTATGAACCAAATTGAAACTAAACCTGAAAGTTAGGGACTAAAAAGGTAATTTATCCTAATTTTTTATTGAAAAATATTTAATTAATAAAATATTGTTTAAAAATACTTGTAGCCTCTAAACTTTCACGAAAGTAACAATTTAGTCTCTGAACTTTGGTTTGTAATAATTTAGTTCATATACTTTCAATTTTGTAATAATTTAATCCCCACAATATAGTATGTAACAATTTAGTCCTTGTACTTTTAAATTTGTACCAACTTAGTCTCCAATGTAAAAAATTCATCAAAATTAGATATTAATTTTTATTATATTGTGATGTAGACTTTGTATTTTATAAAAACATTGAGTTTCTAATTAGTTTATCGGTTTATTTATACAAGGAATCACAAAACACTAATTTCTACAATAGAGGCTTATTACAAAATTTAAAGTATAAGAACTAAATTATTACATAATAAAGTTTAGAGATTAAATTATTTCAAAATCAAAAGTATATGGACTAAATCGTTACAAATAAAAGTTCAAAAACTAAATTATTACTTCCCTAAAAATTTAGGGACTAAAAGGTAATTTTAACCTTAAAATATTTAGTTCAACGAAGAATCCAACTAATAACTCACAACAACATTCCTTTTAGATTTTTGAGTAGTTGAGCAAAGAGAGAATCATATGTAGAAAGCCCATGTGGAGTAGTGTAGTACATAAGTAAGCCACATGTAGCCAAAAAAGAGCAAGCAACACTTTTGTCTTGTGAAGGTTGGGCTCCACTTCAAAGAAATGAGCCCAACCCAAAGAAAGTCACTGTTTTTTACAACTCTATAGTCCAAACATAAACTTATAAACTTATTTATTATTTGTAGGATTTTAAGCATGGATTAAATATTTATTAA ATGGATATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGGGGTTACCCGATATTGTAATAATTGTTGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTAGGAATTCCAACTATTTGTTTAATTGATACAAATTGTGACCCNGAGGATTTTAAGCATGGATTAAATATTTATTAA ATGGATATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGTATTAAATATATGACGGGGTTACCCGATATTGTAATAATTGTTGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTAGGAATTCCAACTATTTGTTTAATTGATACAAATTGTGACCCNGAGGATTTTAAGCATGGATTAAATATTTATTAA MDMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTICLIDTNCDPEDFKHGLNIY Homology
BLAST of CcUC02G023200 vs. NCBI nr
Match: AHM88761.1 (ribosomal protein S2, partial [Lagenaria siceraria]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. NCBI nr
Match: YP_009752993.1 (ribosomal protein S2 [Gerrardanthus macrorhizus] >QIT06065.1 ribosomal protein S2 [Gerrardanthus macrorhizus]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. NCBI nr
Match: YP_009456050.1 (ribosomal protein S2 [Momordica charantia] >YP_009738190.1 ribosomal protein S2 [Siraitia siamensis] >YP_009752655.1 ribosomal protein S2 [Ampelosycios humblotii] >YP_009752824.1 ribosomal protein S2 [Baijiania yunnanensis] >YP_009752909.1 ribosomal protein S2 [Momordica sessilifolia] >AUJ21817.1 ribosomal protein S2 [Momordica charantia] >QIB71583.1 ribosomal protein S2 [Siraitia siamensis] >QIT05136.1 ribosomal protein S2 [Ampelosycios humblotii] >QIT05896.1 ribosomal protein S2 [Baijiania yunnanensis] >QIT05981.1 ribosomal protein S2 [Momordica sessilifolia]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. NCBI nr
Match: YP_009317375.1 (ribosomal protein S2 [Coccinia grandis] >YP_009325978.1 ribosomal protein S2 [Citrullus lanatus] >YP_009348020.1 ribosomal protein S2 [Citrullus mucosospermus] >YP_009420783.1 ribosomal protein S2 [Citrullus colocynthis] >YP_009431546.1 ribosomal protein S2 [Citrullus amarus] >YP_009431631.1 ribosomal protein S2 [Citrullus rehmii] >YP_009447439.1 ribosomal protein S2 [Cucurbita maxima] >YP_009456135.1 ribosomal protein S2 [Lagenaria siceraria] >YP_009505069.1 ribosomal protein S2 [Cucurbita pepo] >YP_010131083.1 ribosomal protein S2 [Benincasa hispida] >ALO22031.1 ribosomal protein S2 [Cucurbita ecuadorensis] >ALO22147.1 ribosomal protein S2 [Cucurbita ficifolia] >ALO22201.1 ribosomal protein S2 [Cucurbita foetidissima] >ALO22335.1 ribosomal protein S2 [Cucurbita maxima subsp. andreana] >ALO22560.1 ribosomal protein S2 [Cucurbita pepo subsp. fraterna] >ALO22610.1 ribosomal protein S2 [Cucurbita pepo subsp. ovifera] >ALO22698.1 ribosomal protein S2 [Cucurbita pepo var. ozarkana] >ALO22796.1 ribosomal protein S2 [Cucurbita pepo subsp. pepo] >ALO22851.1 ribosomal protein S2 [Cucurbita pepo var. texana] >ALO22893.1 ribosomal protein S2 [Cucurbita pedatifolia] >APW82450.1 ribosomal protein S2 [Citrullus lanatus subsp. vulgaris] >QNM38520.1 ribosomal protein S2 [Lagenaria siceraria var. microcarpa] >QZL38670.1 ribosomal protein S2 [Citrullus ecirrhosus]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. NCBI nr
Match: AHM91235.1 (ribosomal protein S2 [Lagenaria siceraria]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 6.5e-105 Identity = 182/187 (97.33%), Postives = 185/187 (98.93%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 6.7e-102 Identity = 178/187 (95.19%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy Swiss-Prot
Match: Q0ZJ31 (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 8.7e-102 Identity = 178/187 (95.19%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy Swiss-Prot
Match: B2LMI3 (30S ribosomal protein S2, chloroplastic OS=Guizotia abyssinica OX=4230 GN=rps2 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 3.3e-101 Identity = 177/187 (94.65%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy Swiss-Prot
Match: Q1KXW9 (30S ribosomal protein S2, chloroplastic OS=Helianthus annuus OX=4232 GN=rps2 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 3.3e-101 Identity = 177/187 (94.65%), Postives = 181/187 (96.79%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy TrEMBL
Match: A0A1P8LE54 (Ribosomal protein S2 OS=Citrullus mucosospermus OX=519315 GN=rps2 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy TrEMBL
Match: A0A2Z2CQF0 (30S ribosomal protein S2, chloroplastic OS=Coccinia grandis OX=387127 GN=rps2 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy TrEMBL
Match: X2F5D2 (30S ribosomal protein S2, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rps2 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy TrEMBL
Match: X2F6M8 (Ribosomal protein S2 (Fragment) OS=Lagenaria siceraria OX=3668 GN=rps2 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. ExPASy TrEMBL
Match: A0A6H0ER73 (30S ribosomal protein S2, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=rps2 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CcUC02G023200 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 ) HSP 1 Score: 354.4 bits (908), Expect = 6.0e-98 Identity = 170/187 (90.91%), Postives = 178/187 (95.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|